Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84653 | Canola | nucleus | 90.81 | 85.12 |
| CDY37665 | Canola | cytosol, nucleus, plastid | 67.45 | 76.72 |
| CDY43685 | Canola | nucleus | 80.45 | 73.86 |
| CDX99817 | Canola | nucleus | 50.92 | 62.58 |
| CDX90188 | Canola | nucleus | 63.78 | 59.12 |
| CDY15632 | Canola | nucleus | 60.76 | 58.91 |
| CDY43334 | Canola | nucleus | 63.52 | 58.88 |
| CDY48333 | Canola | nucleus | 61.94 | 57.35 |
| CDX94662 | Canola | nucleus | 60.1 | 56.89 |
| Solyc09g018250.2.1 | Tomato | plastid | 6.96 | 50.0 |
| KRH36716 | Soybean | nucleus | 47.11 | 42.84 |
| KRH42968 | Soybean | nucleus | 46.19 | 42.05 |
| KRH11725 | Soybean | nucleus | 46.33 | 42.02 |
| KRH59101 | Soybean | nucleus | 46.46 | 41.89 |
| CDY11787 | Canola | nucleus | 39.76 | 41.11 |
| Solyc02g071180.2.1 | Tomato | nucleus | 44.09 | 40.34 |
| PGSC0003DMT400007972 | Potato | nucleus | 44.23 | 40.31 |
| VIT_10s0003g02740.t01 | Wine grape | nucleus | 45.14 | 39.49 |
| Zm00001d035703_P001 | Maize | nucleus | 13.91 | 39.26 |
| Zm00001d017358_P001 | Maize | nucleus | 5.64 | 39.09 |
| Solyc03g005750.2.1 | Tomato | nucleus | 43.18 | 39.03 |
| VIT_19s0014g03260.t01 | Wine grape | nucleus | 10.5 | 37.74 |
| CDY61669 | Canola | nucleus | 34.38 | 35.41 |
| CDX78828 | Canola | nucleus | 31.63 | 34.53 |
| Zm00001d035814_P001 | Maize | cytosol, mitochondrion, nucleus, plastid, vacuole | 6.69 | 33.33 |
| TraesCS1D01G411700.1 | Wheat | nucleus | 33.99 | 29.77 |
| KXG33052 | Sorghum | nucleus | 32.15 | 29.77 |
| TraesCS1A01G403900.1 | Wheat | nucleus | 33.86 | 29.76 |
| Os05t0566900-01 | Rice | extracellular | 33.2 | 29.69 |
| TraesCS1B01G433400.1 | Wheat | nucleus | 33.99 | 29.67 |
| GSMUA_Achr7P25510_001 | Banana | nucleus | 32.41 | 29.58 |
| Zm00001d011517_P002 | Maize | nucleus | 32.02 | 29.05 |
| GSMUA_Achr3P31170_001 | Banana | nucleus | 33.46 | 29.04 |
| KXG22544 | Sorghum | nucleus | 31.89 | 28.39 |
| GSMUA_Achr4P14940_001 | Banana | nucleus | 31.63 | 28.39 |
| Zm00001d043962_P001 | Maize | nucleus | 31.23 | 28.27 |
| Os01t0663800-01 | Rice | plasma membrane | 31.23 | 27.97 |
| TraesCS3B01G269500.1 | Wheat | nucleus | 30.84 | 27.81 |
| Zm00001d015193_P001 | Maize | nucleus, plastid | 8.14 | 27.68 |
| GSMUA_Achr4P07880_001 | Banana | nucleus | 32.94 | 27.58 |
| TraesCS3D01G241600.2 | Wheat | nucleus | 30.45 | 27.52 |
| HORVU3Hr1G060080.3 | Barley | cytosol, nucleus, vacuole | 31.23 | 27.36 |
| HORVU1Hr1G089280.1 | Barley | nucleus | 33.73 | 27.14 |
| TraesCS3A01G241400.3 | Wheat | nucleus | 28.87 | 27.03 |
| Zm00001d039041_P007 | Maize | nucleus | 31.63 | 26.72 |
| Zm00001d009591_P006 | Maize | nucleus | 29.79 | 26.49 |
| Zm00001d004950_P001 | Maize | nucleus | 10.24 | 25.16 |
| KXG22612 | Sorghum | nucleus | 27.17 | 24.88 |
| Zm00001d039138_P012 | Maize | nucleus | 26.77 | 24.61 |
| TraesCS1A01G420300.1 | Wheat | nucleus | 27.17 | 24.5 |
| TraesCS1D01G428100.1 | Wheat | nucleus | 27.03 | 24.18 |
| TraesCS1B01G450700.1 | Wheat | nucleus | 27.03 | 24.15 |
| HORVU1Hr1G091730.18 | Barley | mitochondrion | 27.3 | 24.13 |
| Os05t0581800-01 | Rice | nucleus | 26.12 | 23.36 |
| CDY08888 | Canola | nucleus | 17.45 | 23.05 |
| Zm00001d009683_P004 | Maize | nucleus | 25.33 | 22.68 |
| CDX76544 | Canola | nucleus | 16.4 | 21.97 |
| KRH38470 | Soybean | endoplasmic reticulum | 1.97 | 18.99 |
| CDY24202 | Canola | nucleus | 13.25 | 17.91 |
| CDY43361 | Canola | nucleus | 12.86 | 16.93 |
| CDY72379 | Canola | cytosol, nucleus, plastid | 2.89 | 16.67 |
| CDY28028 | Canola | nucleus | 16.67 | 15.72 |
| CDY35953 | Canola | nucleus | 16.8 | 15.71 |
| CDY22126 | Canola | nucleus | 16.8 | 15.63 |
| CDY61561 | Canola | cytosol | 1.31 | 15.15 |
| CDX97535 | Canola | nucleus | 16.54 | 14.6 |
| CDY65326 | Canola | nucleus | 16.27 | 14.57 |
| CDY39087 | Canola | nucleus | 15.88 | 13.86 |
| CDY33258 | Canola | nucleus | 15.62 | 13.66 |
| CDY53764 | Canola | extracellular, vacuole | 7.61 | 13.36 |
| CDY53767 | Canola | nucleus | 9.71 | 12.03 |
Protein Annotations
| EnsemblPlants:CDY61562 | EnsemblPlantsGene:GSBRNA2T00034011001 | ncoils:Coil | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF20 | ProteinID:CDY61562 |
| ProteinID:CDY61562.1 | SEG:seg | UniParc:UPI0004EE543A | UniProt:A0A078JB27 | MapMan:35.2 | : |
Description
BnaCnng37970DBnaCnng37970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JB27]
Coordinates
chrLK034011:+:511..4661
Molecular Weight (calculated)
83740.1 Da
IEP (calculated)
5.562
GRAVY (calculated)
-0.987
Length
762 amino acids
Sequence
(BLAST)
(BLAST)
001: MPFCIQQTLY PFHEVKSKKE KKKENRDIPD SRPRGYSNTY NRGSRGGSDR YAGRSGATSF GSSESGRLQG KTTNKRESEK QTYAGSFSST SGVSSHRQIP
101: HSDSVAVDSK TPTVSSGISS SQPVSVQQTP WFGAAGQMSM ADIVKMGGRP HSKKTNSQKN HEHESAANQH VPVKDQWPSI EKPMAPGTAS VSVAPTESET
201: CSGPADYQSS RGDHQLKGQW EDTQLADNGP FGNHGRDQVQ ADTVADGVVP EDESGVSSEF DDNTYRHETT QNHPVEHQKD QDNVSSVAAN LQELSIENHD
301: KHSSHDEDRP AVLIPDHLLV YTEECSQLSF GSFGSRPLNN NLEEASDIAP QIEHSDARHA LITDFPFLIN EHLGSMSNGN RVHASTAENY NDSSESQGED
401: LLPENPETVH QENQYTVAQS DQEYAYENAK QQMNTAFDAS QTSMHNQMQN LTSLTNVMQG YSNSVPNTLL GQNAQSAREL ELQYTTFPGA QSMPSRSNDS
501: SQGGQSISMP EALRDGGGIQ TTQPSQQNLP GANIATQQLP MHPYSQHTVP LTHFANMMSY PLMPQSYPYM PFAGNSPYHP SLAALLPQYK NNVSASNLPQ
601: SVTSAPISSA YGFGNSNNVG PGNFPLNQQQ QQQQAAPTGA TLSYEDIMSL QYKQNNHLLS LQQQQQQQND NSPLWVHGPG SQTMSGVQSN AYYSLQAQQQ
701: AQQLRQAQQE AQQQYGSLGY PNYYQSQTGM SMEHQQQNPR EGGSQGQPSK QTQQQHLWQN SY
101: HSDSVAVDSK TPTVSSGISS SQPVSVQQTP WFGAAGQMSM ADIVKMGGRP HSKKTNSQKN HEHESAANQH VPVKDQWPSI EKPMAPGTAS VSVAPTESET
201: CSGPADYQSS RGDHQLKGQW EDTQLADNGP FGNHGRDQVQ ADTVADGVVP EDESGVSSEF DDNTYRHETT QNHPVEHQKD QDNVSSVAAN LQELSIENHD
301: KHSSHDEDRP AVLIPDHLLV YTEECSQLSF GSFGSRPLNN NLEEASDIAP QIEHSDARHA LITDFPFLIN EHLGSMSNGN RVHASTAENY NDSSESQGED
401: LLPENPETVH QENQYTVAQS DQEYAYENAK QQMNTAFDAS QTSMHNQMQN LTSLTNVMQG YSNSVPNTLL GQNAQSAREL ELQYTTFPGA QSMPSRSNDS
501: SQGGQSISMP EALRDGGGIQ TTQPSQQNLP GANIATQQLP MHPYSQHTVP LTHFANMMSY PLMPQSYPYM PFAGNSPYHP SLAALLPQYK NNVSASNLPQ
601: SVTSAPISSA YGFGNSNNVG PGNFPLNQQQ QQQQAAPTGA TLSYEDIMSL QYKQNNHLLS LQQQQQQQND NSPLWVHGPG SQTMSGVQSN AYYSLQAQQQ
701: AQQLRQAQQE AQQQYGSLGY PNYYQSQTGM SMEHQQQNPR EGGSQGQPSK QTQQQHLWQN SY
001: MSSSKVGGGA RKGIQDIPSG SRKIVQSLTE IVNSPEAEIY AMLKECNMDP NETVSRLLSQ DPFHEVKSKK EKKKETRDIS DSRPRGANNT YNRGARGGSA
101: RYAGRSGSTH FSSTDSGNFQ GKSTNKKESG TQGYTSSWSS ASGVANTYQT PHSEPIAMEN KLPPVTLGDG ISSSKSASGH QTAWFGAPGQ RSMAEVVKMG
201: RPQNKTTKQN VNVGSEINHE HEVNANQQAP VKDEWPSIEK PLAPSTSSLS VAPAESEVRN GLADFQSDRG DQYLKDRLEN IHIAESGPSE SRGVDHVQAD
301: SVQEDESVVS SEIDDNPYQT QSHPVEHHKD EDDVSSGSAS FQQLDSHDQE VSHEEDRPAV VIPNHLLIHT EECAQLSFGS FGGFGSRPLS NSVEATSDVA
401: PQIEHSDARN TEFYGDEHLG STTNGNMVHT PATGNYDDSL ETRREVLKQE NSEGAQEHQY TFTQSEQGYA YENAKQQQMN SAYDASHTNS QNQMHNLDSL
501: SNVMQGYSHS VPNTLLAQTA QNARELDFQY SPFSAQQSMQ SRTSNNASSL GGQSISMPEA LRGSGIPATQ PTQQTLPGAN IATGPALPQQ LPMHYSQPTL
601: PLTHYANMIG YPLMPQNYPY MPSAFQQTFA GNSAYHQQLA ALLPQYKTNV SPGNLPQSAT APASAYGFGN STNVGSAGNF PLNQQSATTG TTLGYEDVLS
701: SQYKENHLLA LQQQQQQQQH QQQNENSAMW HQGHGSRTMS GVPTNTYYNL QAQQQLQLQH QQQQQQAQQA AGGYRQAQQQ QHYGSHGYPN YYQSQTEMSL
801: ERQQQNPRDG AGSQAGQPSN QSQQQLWQNS Y
101: RYAGRSGSTH FSSTDSGNFQ GKSTNKKESG TQGYTSSWSS ASGVANTYQT PHSEPIAMEN KLPPVTLGDG ISSSKSASGH QTAWFGAPGQ RSMAEVVKMG
201: RPQNKTTKQN VNVGSEINHE HEVNANQQAP VKDEWPSIEK PLAPSTSSLS VAPAESEVRN GLADFQSDRG DQYLKDRLEN IHIAESGPSE SRGVDHVQAD
301: SVQEDESVVS SEIDDNPYQT QSHPVEHHKD EDDVSSGSAS FQQLDSHDQE VSHEEDRPAV VIPNHLLIHT EECAQLSFGS FGGFGSRPLS NSVEATSDVA
401: PQIEHSDARN TEFYGDEHLG STTNGNMVHT PATGNYDDSL ETRREVLKQE NSEGAQEHQY TFTQSEQGYA YENAKQQQMN SAYDASHTNS QNQMHNLDSL
501: SNVMQGYSHS VPNTLLAQTA QNARELDFQY SPFSAQQSMQ SRTSNNASSL GGQSISMPEA LRGSGIPATQ PTQQTLPGAN IATGPALPQQ LPMHYSQPTL
601: PLTHYANMIG YPLMPQNYPY MPSAFQQTFA GNSAYHQQLA ALLPQYKTNV SPGNLPQSAT APASAYGFGN STNVGSAGNF PLNQQSATTG TTLGYEDVLS
701: SQYKENHLLA LQQQQQQQQH QQQNENSAMW HQGHGSRTMS GVPTNTYYNL QAQQQLQLQH QQQQQQAQQA AGGYRQAQQQ QHYGSHGYPN YYQSQTEMSL
801: ERQQQNPRDG AGSQAGQPSN QSQQQLWQNS Y
Arabidopsis Description
Kinase-related protein of unknown function (DUF1296) [Source:TAIR;Acc:AT1G29350]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.