Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- nucleus 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d015193_P001 | Maize | nucleus, plastid | 23.57 | 90.18 |
KXG22544 | Sorghum | nucleus | 89.5 | 89.6 |
Zm00001d039041_P007 | Maize | nucleus | 86.81 | 82.48 |
Zm00001d050118_P001 | Maize | mitochondrion | 33.37 | 68.1 |
Os05t0566900-01 | Rice | extracellular | 65.34 | 65.73 |
TraesCS1A01G403900.1 | Wheat | nucleus | 63.48 | 62.75 |
TraesCS1D01G411700.1 | Wheat | nucleus | 63.59 | 62.64 |
TraesCS1B01G433400.1 | Wheat | nucleus | 63.48 | 62.31 |
Zm00001d035703_P001 | Maize | nucleus | 18.67 | 59.26 |
KRH38470 | Soybean | endoplasmic reticulum | 5.25 | 56.96 |
HORVU1Hr1G089280.1 | Barley | nucleus | 62.89 | 56.92 |
Zm00001d043962_P001 | Maize | nucleus | 53.91 | 54.87 |
Zm00001d011517_P002 | Maize | nucleus | 53.68 | 54.76 |
Zm00001d017358_P001 | Maize | nucleus | 6.88 | 53.64 |
CDY61561 | Canola | cytosol | 3.97 | 51.52 |
Zm00001d035814_P001 | Maize | cytosol, mitochondrion, nucleus, plastid, vacuole | 7.58 | 42.48 |
GSMUA_Achr7P25510_001 | Banana | nucleus | 40.72 | 41.8 |
GSMUA_Achr4P14940_001 | Banana | nucleus | 40.72 | 41.11 |
Zm00001d004950_P001 | Maize | nucleus | 14.82 | 40.97 |
Solyc09g018250.2.1 | Tomato | plastid | 5.02 | 40.57 |
GSMUA_Achr3P31170_001 | Banana | nucleus | 39.67 | 38.72 |
GSMUA_Achr4P07880_001 | Banana | nucleus | 40.72 | 38.35 |
VIT_10s0003g02740.t01 | Wine grape | nucleus | 37.34 | 36.74 |
PGSC0003DMT400007972 | Potato | nucleus | 35.47 | 36.36 |
KRH42968 | Soybean | nucleus | 35.24 | 36.08 |
KRH59101 | Soybean | nucleus | 35.24 | 35.74 |
Solyc02g071180.2.1 | Tomato | nucleus | 34.66 | 35.65 |
Solyc03g005750.2.1 | Tomato | nucleus | 33.96 | 34.52 |
Bra030134.1-P | Field mustard | nucleus | 31.39 | 34.4 |
KRH36716 | Soybean | nucleus | 33.49 | 34.25 |
CDY15632 | Canola | nucleus | 31.16 | 33.97 |
VIT_19s0014g03260.t01 | Wine grape | nucleus | 8.4 | 33.96 |
KRH11725 | Soybean | nucleus | 33.14 | 33.81 |
CDY48333 | Canola | nucleus | 32.09 | 33.41 |
AT1G29370.1 | Thale cress | nucleus | 32.32 | 33.33 |
CDX90188 | Canola | nucleus | 31.97 | 33.33 |
AT1G29350.1 | Thale cress | nucleus | 32.21 | 33.21 |
CDY43334 | Canola | nucleus | 31.86 | 33.21 |
Bra010832.1-P | Field mustard | nucleus | 31.86 | 33.21 |
CDX94662 | Canola | nucleus | 31.16 | 33.17 |
Bra021900.1-P | Field mustard | nucleus | 31.62 | 33.01 |
CDY43685 | Canola | nucleus | 31.86 | 32.89 |
Zm00001d039138_P012 | Maize | nucleus | 31.62 | 32.69 |
CDY61669 | Canola | nucleus | 27.54 | 31.89 |
Bra022970.1-P | Field mustard | nucleus | 30.11 | 31.89 |
Bra032310.1-P | Field mustard | nucleus | 31.62 | 31.55 |
CDX84653 | Canola | nucleus | 29.87 | 31.49 |
Bra013287.1-P | Field mustard | nucleus | 28.59 | 31.41 |
CDX78828 | Canola | nucleus | 25.55 | 31.38 |
CDX99817 | Canola | nucleus | 22.4 | 30.97 |
Zm00001d009683_P004 | Maize | nucleus | 30.22 | 30.43 |
CDY61562 | Canola | nucleus | 26.49 | 29.79 |
AT4G18150.1 | Thale cress | nucleus | 26.14 | 29.55 |
CDY37665 | Canola | cytosol, nucleus, plastid | 22.29 | 28.51 |
CDY08888 | Canola | nucleus | 15.29 | 22.7 |
CDX76544 | Canola | nucleus | 14.7 | 22.14 |
Bra021022.1-P | Field mustard | nucleus | 15.4 | 21.26 |
AT5G46380.2 | Thale cress | nucleus | 16.22 | 21.0 |
CDY11787 | Canola | nucleus | 15.75 | 18.32 |
Zm00001d044979_P010 | Maize | nucleus | 16.57 | 16.67 |
Zm00001d050112_P011 | Maize | nucleus | 16.45 | 16.65 |
Zm00001d037122_P009 | Maize | nucleus | 16.45 | 16.4 |
Zm00001d029487_P001 | Maize | nucleus | 11.32 | 13.14 |
Protein Annotations
EnsemblPlants:Zm00001d009591_P006 | EnsemblPlants:Zm00001d009591_T006 | EnsemblPlantsGene:Zm00001d009591 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
InterPro:GIP1 | InterPro:UBA-like_sf | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF35 | PFAM:PF06972 | ProteinID:AQK92199.1 |
SEG:seg | SUPFAM:SSF46934 | UniParc:UPI00084561F6 | UniProt:A0A1D6FKE5 | MapMan:35.2 | : |
Description
GBF-interacting protein 1
Coordinates
chr8:+:72047548..72074372
Molecular Weight (calculated)
91659.7 Da
IEP (calculated)
5.383
GRAVY (calculated)
-0.684
Length
857 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGGGAGGKG AAAPVPAGSR KLVQCLKEIV NRPEAEIYSA LRECGMDPDE AVSRLLSQDT FQEVKSKRDK KKEIKEVPET RYRSANSSTN RSLRSGADRG
101: GRSNSVHSSS TDNMTSRPPV SGSCTASVNS NQMQTIASSS ANKHMVTDGL AVSLQSSCGF QHGGWSGTPG QLSMVDIVKM GRPQGKASSK PVVTADRGYA
201: GQYPSLPSTN QNLKQSGSMV SPAELDKGLQ PAHNLVQVKN HGHFTADSKL PYGTDWSPQD DPTSENQSSQ PETSGDPSLY ESSFQSSTLV TDVVNSHENS
301: HLELDENSTF AMRSTPASER HLEPSDSIPE YNDGILNNSS SYQPHNYSYT EQDAVEDSSA DVSAAAENFQ SLSLHNDELA AKKTAEDNPA VIIPDHLQVT
401: NTECVSLSFG SFGSGAFSGL LPQKTTDSNV EFLVQEDSAT VDPIDARNQD YYESGAVTSP AEENLEAMLG TNMENVDAPS VSQANELSQD VLDPSVLKYD
501: VSSVSSHAYS NMNTPQPSTI EDPQGNNQAH TLSHLSNMMQ ANPLSTSSLL ASNQNHPSLH GLEFDLPYLE AKYNAGTTTN PRPAISMQEA LKAGVFSNAR
601: STQSLPSTSI PTGHPLPQQL AHHPYSQPTL APITHFPNIV GYPPYLPQNY AAYLSSGTFQ QAYPSNGAFH QSAAALLGSG MKYSAPEYKN NLSATGLQQQ
701: HQPQPQPPSS VISGYGGLGS SSNIQGNFTL NQSTGTGSTL VFDDALGRQY KDTSQHIALQ QPDNSGMWLH GSGSRAAALP PNHFYGYQGQ SQLGGFGQAQ
801: QQQPSQFGGH GYPTFYQSQG GLTQEHHPQN LAEGSLNGFQ VAPSQPSHPS WQHQHTY
101: GRSNSVHSSS TDNMTSRPPV SGSCTASVNS NQMQTIASSS ANKHMVTDGL AVSLQSSCGF QHGGWSGTPG QLSMVDIVKM GRPQGKASSK PVVTADRGYA
201: GQYPSLPSTN QNLKQSGSMV SPAELDKGLQ PAHNLVQVKN HGHFTADSKL PYGTDWSPQD DPTSENQSSQ PETSGDPSLY ESSFQSSTLV TDVVNSHENS
301: HLELDENSTF AMRSTPASER HLEPSDSIPE YNDGILNNSS SYQPHNYSYT EQDAVEDSSA DVSAAAENFQ SLSLHNDELA AKKTAEDNPA VIIPDHLQVT
401: NTECVSLSFG SFGSGAFSGL LPQKTTDSNV EFLVQEDSAT VDPIDARNQD YYESGAVTSP AEENLEAMLG TNMENVDAPS VSQANELSQD VLDPSVLKYD
501: VSSVSSHAYS NMNTPQPSTI EDPQGNNQAH TLSHLSNMMQ ANPLSTSSLL ASNQNHPSLH GLEFDLPYLE AKYNAGTTTN PRPAISMQEA LKAGVFSNAR
601: STQSLPSTSI PTGHPLPQQL AHHPYSQPTL APITHFPNIV GYPPYLPQNY AAYLSSGTFQ QAYPSNGAFH QSAAALLGSG MKYSAPEYKN NLSATGLQQQ
701: HQPQPQPPSS VISGYGGLGS SSNIQGNFTL NQSTGTGSTL VFDDALGRQY KDTSQHIALQ QPDNSGMWLH GSGSRAAALP PNHFYGYQGQ SQLGGFGQAQ
801: QQQPSQFGGH GYPTFYQSQG GLTQEHHPQN LAEGSLNGFQ VAPSQPSHPS WQHQHTY
001: MGSSAIEVNA IPEYTRAIVR SMKEIVNCSE QEIYAMLVEC NMNADEAITR LLSQDSFQEV KSKRDKKKEA KDALEIQRLS GRNQYHKSKN GSDQNGGNKL
101: NSYGTSNVQR IRNHLAGSSL NSAISNVETK RVPTSSEEAV PSLSVPSSTL VTALGCGTSA SSKDSVTKAP VKDDCLLPEK PVAPNPFSNS FNEPAARRDQ
201: LQESPSVSNQ IFRNGGSHLL RDNYNNKNDE TNQVQRSSCE NNRTKDPSVP VNSDQCNSDL QNLKFGRFGS GEVHMIMNNQ SLALPSQFLN DPADDLSFRH
301: LNLRDEEEEQ QPRMNVANEK MAYEVNSNAA RNYNSSPNCD HTEPTQENQY TSSSATDFTF YNSQLFNPVM APAERSLQMP NLNTFPDSMH QQAFTREHVN
401: AWYSASPLNQ SMYAASSLGR RLPVSMTEMN RQAMNHHLYP QPNVPSEHYG NMMNYPYSLP TQNDNTYDMP ASAFQQHGGL NNDAYHLRPL VAPLPLHRDS
501: YPCPPTLAAG PYTRSSAYGS ANGPAYDSAY GCGMLSDHNT ANLRFDDEDD FHTRFSNHLA SLQHQNGTSS MWTPPGLNES GSSYYRLYSG PQNQQSESFR
601: RSQQDLL
101: NSYGTSNVQR IRNHLAGSSL NSAISNVETK RVPTSSEEAV PSLSVPSSTL VTALGCGTSA SSKDSVTKAP VKDDCLLPEK PVAPNPFSNS FNEPAARRDQ
201: LQESPSVSNQ IFRNGGSHLL RDNYNNKNDE TNQVQRSSCE NNRTKDPSVP VNSDQCNSDL QNLKFGRFGS GEVHMIMNNQ SLALPSQFLN DPADDLSFRH
301: LNLRDEEEEQ QPRMNVANEK MAYEVNSNAA RNYNSSPNCD HTEPTQENQY TSSSATDFTF YNSQLFNPVM APAERSLQMP NLNTFPDSMH QQAFTREHVN
401: AWYSASPLNQ SMYAASSLGR RLPVSMTEMN RQAMNHHLYP QPNVPSEHYG NMMNYPYSLP TQNDNTYDMP ASAFQQHGGL NNDAYHLRPL VAPLPLHRDS
501: YPCPPTLAAG PYTRSSAYGS ANGPAYDSAY GCGMLSDHNT ANLRFDDEDD FHTRFSNHLA SLQHQNGTSS MWTPPGLNES GSSYYRLYSG PQNQQSESFR
601: RSQQDLL
Arabidopsis Description
Kinase-related protein of unknown function (DUF1296) [Source:TAIR;Acc:AT5G46380]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.