Factsheet for Bra030134.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15632	Canola	nucleus	95.78	95.29
Bra010832.1-P	Field mustard	nucleus	81.33	77.37
AT1G29370.1	Thale cress	nucleus	79.41	74.73
AT1G29350.1	Thale cress	nucleus	79.41	74.73
Bra032310.1-P	Field mustard	nucleus	80.82	73.57
Bra022970.1-P	Field mustard	nucleus	63.81	61.68
Bra021900.1-P	Field mustard	nucleus	64.32	61.27
KRH38470	Soybean	endoplasmic reticulum	6.14	60.76
Solyc09g018250.2.1	Tomato	plastid	6.91	50.94
KRH36716	Soybean	nucleus	48.47	45.23
KRH11725	Soybean	nucleus	48.34	45.0
VIT_10s0003g02740.t01	Wine grape	nucleus	49.87	44.78
KRH59101	Soybean	nucleus	48.34	44.73
KRH42968	Soybean	nucleus	47.7	44.56
Solyc02g071180.2.1	Tomato	nucleus	45.27	42.5
PGSC0003DMT400007972	Potato	nucleus	44.88	41.99
Solyc03g005750.2.1	Tomato	nucleus	44.25	41.04
Zm00001d035703_P001	Maize	nucleus	13.43	38.89
Bra013287.1-P	Field mustard	nucleus	38.62	38.72
Zm00001d017358_P001	Maize	nucleus	5.12	36.36
GSMUA_Achr7P25510_001	Banana	nucleus	38.24	35.81
VIT_19s0014g03260.t01	Wine grape	nucleus	9.46	34.91
GSMUA_Achr3P31170_001	Banana	nucleus	38.11	33.94
GSMUA_Achr4P14940_001	Banana	nucleus	36.32	33.45
KXG33052	Sorghum	nucleus	35.17	33.41
Os05t0566900-01	Rice	extracellular	36.19	33.22
TraesCS1A01G403900.1	Wheat	nucleus	36.57	32.99
TraesCS1B01G433400.1	Wheat	nucleus	36.7	32.88
TraesCS1D01G411700.1	Wheat	nucleus	36.57	32.87
GSMUA_Achr4P07880_001	Banana	nucleus	38.24	32.86
KXG22544	Sorghum	nucleus	35.68	32.59
Zm00001d011517_P002	Maize	nucleus	34.65	32.26
Zm00001d043962_P001	Maize	nucleus	34.14	31.71
Zm00001d009591_P006	Maize	nucleus	34.4	31.39
TraesCS3D01G241600.2	Wheat	nucleus	33.76	31.32
Os01t0663800-01	Rice	plasma membrane	33.89	31.14
TraesCS3B01G269500.1	Wheat	nucleus	33.63	31.12
TraesCS3A01G241400.3	Wheat	nucleus	31.97	30.71
Zm00001d039041_P007	Maize	nucleus	35.42	30.71
HORVU3Hr1G060080.3	Barley	cytosol, nucleus, vacuole	34.14	30.69
HORVU1Hr1G089280.1	Barley	nucleus	36.57	30.2
Zm00001d015193_P001	Maize	nucleus, plastid	8.57	29.91
Zm00001d039138_P012	Maize	nucleus	30.18	28.47
KXG22612	Sorghum	nucleus	30.18	28.37
Zm00001d035814_P001	Maize	cytosol, mitochondrion, nucleus, plastid, vacuole	5.5	28.1
TraesCS1A01G420300.1	Wheat	nucleus	30.18	27.93
TraesCS1D01G428100.1	Wheat	nucleus	29.67	27.23
Os05t0581800-01	Rice	nucleus	29.28	26.88
Zm00001d009683_P004	Maize	nucleus	28.64	26.32
Zm00001d004950_P001	Maize	nucleus	10.23	25.81
HORVU1Hr1G091730.18	Barley	mitochondrion	27.62	25.06
TraesCS1B01G450700.1	Wheat	nucleus	26.21	24.03
Bra021022.1-P	Field mustard	nucleus	18.8	23.67
Bra039379.1-P	Field mustard	nucleus	9.46	18.88
Bra040021.1-P	Field mustard	nucleus	19.44	18.49
Bra029667.1-P	Field mustard	nucleus	18.67	17.68
Bra038015.1-P	Field mustard	nucleus	12.4	15.93
Bra021524.1-P	Field mustard	nucleus	16.37	14.7
Bra027380.1-P	Field mustard	nucleus	16.62	14.41

Protein Annotations

EnsemblPlants:Bra030134.1	EnsemblPlants:Bra030134.1-P	EnsemblPlantsGene:Bra030134	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:GIP1	InterPro:UBA-like_sf	PANTHER:PTHR12758	PANTHER:PTHR12758:SF20	PFAM:PF06972	SEG:seg
SUPFAM:SSF46934	UniParc:UPI0002541095	UniProt:M4EMW4	MapMan:35.2	:	:

Description

AT1G29370 (E=4e-249) | kinase-related

Coordinates

chrA07:+:6280057..6284491

Molecular Weight (calculated)

85216.0 Da

IEP (calculated)

5.836

GRAVY (calculated)

-0.951

Length

782 amino acids

Sequence
(BLAST)

001: MSSSSKVSLG GGGGRNDIPS GCRKIVQSLK EIVNSPEAEI YAMLKECNMD PNEAVHRLLS QDPFHEVKSK KEKKKETRDI PDSRLRGTYN TYNRGGRGAS
101: DRYTGSSHFS STGSGNFQGK STDKKKSGTQ GHAGSWSSAS GVANHHQTPH SDSVVTENKL PSAPSGDGIS SSQSASGHQT AWFGAPGKMS MADIVKMGRP
201: QNKTKNLQQN VNTHSEINHE NEANANHQVP VKDEWPSIEK PQAPNTSSVS VAPVESEICS SPADLQSDRV DQHLSDRLGD IHLAENGPSE NLGVDHVQHD
301: SVNGRNVQED DSGVSSEFKD NQYTYQTQSH PVEHHKDEDE VSSGSAELQQ LTVDDQEASH EEDRPAVLIP NHLLIHTKEC SQLSFGSFGS MTLSNNAEET
401: PDVAQQVEHS DARNTEFYGD EHLGSTANGN MGHAPAAGNY DDSLESRPEV LKQENSETAQ ENQYAFAQSE PGYAKQQLNT AYDASQINAQ NQMQNLASLS
501: NVMGYPHSVP NSLLAQNARE LEIQYAMQSR NNNNASSLGG QSIPMPEALR GSGVPATQQT QQTLPGANMA TGTALPQQLP MHPYSQPTIP LAHFANMLGY
601: PPMPQNYPYM PSAFPQTFAG NSLYQQQLAA LLPQYKTNLS PSNLPHSATA LNVGSAGNFP LNQQSAPPGT TMGYEDAQYK ESNHLLAPQQ QNENSAMWHH
701: GHGSRTMSGV PANTYYNLQA QQQQQLRQAQ QQQHYGSHGY PNYYQSQTEV SHERQQQNPR DGAGAQAGQP SNQTQQLWQN SY

Best Arabidopsis Sequence Match ( AT1G29370.1 )
(BLAST)

001: MSSSKVGGGA RKGIQDIPSG SRKIVQSLTE IVNSPEAEIY AMLKECNMDP NETVSRLLSQ DPFHEVKSKK EKKKETRDIS DSRPRGANNT YNRGARGGSA
101: RYAGRSGSTH FSSTDSGNFQ GKSTNKKESG TQGYTSSWSS ASGVANTYQT PHSEPVATEN KLPPVTLGDG ISSSQSASGH QTAWFGAPGQ RSMAEVVKMG
201: RPQNKTTKQN VNMGSEINHE HKVSANHQAP VKDEWPSIEK PLAPSTSSLS VAPAESEVRN GPADFQSDRG DQYLKDRLEN IHIAESGPSE SRKVDHVQAD
301: SVQEDESVVS SEIDDNPYQT QSHPVEHHKD EDDVSSGSAS FQQLDSHDQE VSHEKDRPAV VIPNHLLIHT EECAQLSFGS FGGFGSRPLS NSVEATSDVA
401: PQIEHSDARN TEFYGDEHLG STTNGNMVHT PATGNYDDSL ETRREVLKQE NSEGAQEHQY TFTQSEQGYA YENAKQQQMN SAYDASHTNS QNQMHNLDSL
501: SNVMQGYSHS VPNTLLAQTA QNARELDFQY SPFSAQQSMQ SRTSNNASSL GGQSISMPEA LRGSGIPATQ PTQQTLPGAN IATGPALPQQ LPMHYSQPTL
601: PLTHYANMIG YPLMPQNYPY MPSAFQQTFA GNSAYHQQLA ALLPQYKTNV SPGNLPQSAT APASAYGFGN STNVGSAGNF PLNQQSATTG TTLGYDDVLS
701: SQYKENHLLA LQQQQQQQQH QQQNENSAMW HQGHGSRTMS GVPTNTYYNL QAQQQLQLQH QQQQQQAQQA AGGYRQAQQQ QHYGSHGYPN YYQSQTEMSL
801: ERQQQNPRDG AGSQAGQPSN QSQQQLWQNS Y

Arabidopsis Description

RNA polymerase II degradation factor-like protein (DUF1296) [Source:UniProtKB/TrEMBL;Acc:Q8VZT4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.