Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G428100.1 | Wheat | nucleus | 97.16 | 96.36 |
| TraesCS1B01G450700.1 | Wheat | nucleus | 90.3 | 89.45 |
| HORVU1Hr1G091730.18 | Barley | mitochondrion | 88.88 | 87.12 |
| Os05t0581800-01 | Rice | nucleus | 64.5 | 63.97 |
| KXG22612 | Sorghum | nucleus | 62.72 | 63.7 |
| Zm00001d039138_P012 | Maize | nucleus | 61.78 | 62.97 |
| Zm00001d009683_P004 | Maize | nucleus | 60.47 | 60.05 |
| KRH38470 | Soybean | endoplasmic reticulum | 4.97 | 53.16 |
| CDY61561 | Canola | cytosol | 3.91 | 50.0 |
| Solyc09g018250.2.1 | Tomato | plastid | 5.09 | 40.57 |
| GSMUA_Achr7P25510_001 | Banana | nucleus | 36.45 | 36.89 |
| GSMUA_Achr4P14940_001 | Banana | nucleus | 37.04 | 36.87 |
| VIT_10s0003g02740.t01 | Wine grape | nucleus | 36.09 | 35.02 |
| GSMUA_Achr4P07880_001 | Banana | nucleus | 37.51 | 34.84 |
| TraesCS1A01G403900.1 | Wheat | nucleus | 34.91 | 34.03 |
| VIT_19s0014g03260.t01 | Wine grape | nucleus | 8.52 | 33.96 |
| TraesCS3A01G241400.3 | Wheat | nucleus | 31.95 | 33.17 |
| PGSC0003DMT400007972 | Potato | nucleus | 32.78 | 33.13 |
| Solyc02g071180.2.1 | Tomato | nucleus | 32.66 | 33.13 |
| GSMUA_Achr3P31170_001 | Banana | nucleus | 34.2 | 32.92 |
| Solyc03g005750.2.1 | Tomato | nucleus | 32.31 | 32.38 |
| KRH42968 | Soybean | nucleus | 32.07 | 32.38 |
| KRH36716 | Soybean | nucleus | 31.72 | 31.98 |
| KRH11725 | Soybean | nucleus | 31.36 | 31.55 |
| KRH59101 | Soybean | nucleus | 30.77 | 30.77 |
| CDY43334 | Canola | nucleus | 29.7 | 30.54 |
| AT1G29370.1 | Thale cress | nucleus | 29.7 | 30.2 |
| Bra030134.1-P | Field mustard | nucleus | 27.93 | 30.18 |
| CDX90188 | Canola | nucleus | 29.23 | 30.05 |
| CDY15632 | Canola | nucleus | 27.93 | 30.03 |
| AT1G29350.1 | Thale cress | nucleus | 29.47 | 29.96 |
| Bra010832.1-P | Field mustard | nucleus | 28.88 | 29.68 |
| CDX94662 | Canola | nucleus | 28.05 | 29.44 |
| CDY48333 | Canola | nucleus | 28.64 | 29.4 |
| Bra021900.1-P | Field mustard | nucleus | 28.52 | 29.35 |
| CDY43685 | Canola | nucleus | 28.64 | 29.16 |
| Bra022970.1-P | Field mustard | nucleus | 27.34 | 28.55 |
| Bra013287.1-P | Field mustard | nucleus | 26.27 | 28.46 |
| CDX84653 | Canola | nucleus | 27.22 | 28.29 |
| CDY61669 | Canola | nucleus | 24.73 | 28.24 |
| CDX78828 | Canola | nucleus | 23.2 | 28.08 |
| Bra032310.1-P | Field mustard | nucleus | 28.4 | 27.94 |
| CDX99817 | Canola | nucleus | 20.24 | 27.58 |
| AT4G18150.1 | Thale cress | nucleus | 24.5 | 27.31 |
| CDY61562 | Canola | nucleus | 24.5 | 27.17 |
| CDY37665 | Canola | cytosol, nucleus, plastid | 19.53 | 24.63 |
| CDX76544 | Canola | nucleus | 16.21 | 24.08 |
| CDY08888 | Canola | nucleus | 16.09 | 23.57 |
| Bra021022.1-P | Field mustard | nucleus | 16.45 | 22.38 |
| AT5G46380.2 | Thale cress | nucleus | 15.62 | 19.94 |
| CDY11787 | Canola | nucleus | 15.27 | 17.5 |
| TraesCS5A01G170600.1 | Wheat | nucleus | 16.92 | 17.35 |
| TraesCS7A01G166800.4 | Wheat | nucleus | 14.32 | 13.66 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G420300.1 | EnsemblPlantsGene:TraesCS1A01G420300 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:GIP1 |
| InterPro:UBA-like_sf | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF25 | PFAM:PF06972 | SEG:seg | SUPFAM:SSF46934 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1A:+:576778128..576784054
Molecular Weight (calculated)
88488.4 Da
IEP (calculated)
4.992
GRAVY (calculated)
-0.631
Length
845 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGGGRGGGG GGRGQQQQAR GAAAAGDGAE IPQASRKLVQ GLKGILADRT EAEIYATLLD CAMDPDVAVE RLISQDPFHE VRRKRSNKKE VKAPQETRSR
101: PFYKPAYRGS KVGSDRGGRV YSGPGDSTAS AKGPIKKETE LLPPPNTSTS DAVKDSNPME TISEAGNLAD AKSTSFQPPQ VQHGWGGVPG RPSLAEIVKM
201: GRPQAKSGAR PVANNAAKPV GGSVAANANL NTVLPSEGDR VTAEKLPNGT IQSPSVPKED SVGILPPGQG SDVPEGIGAA SANVSAPRSF TLEVKNDDAG
301: DANEQTKETS GSNATGLTSP GPLSPSDKGT ILNNDLIEKT DVYLSDEHSF EHNQNADSNG DMSTTAYELE HLTIHEENRP KPSDDNPAVI IPGHLQVSNA
401: DFAHLTFGSF VSGTLDAPCS MMPANSDVEV AAVPDNQSGD QCDARIHEFE NKETVTPAAN EYIASAPDSN AENPDITSAQ QSEVGRADSL DVTNNTEYNL
501: SSDYATSSAV QPEPTVQTYL QDNRQMQNIS PLSNFMQGNM PNGLLPPAIP PFRELDPAFS LLLTNPPLAT MVHGTPQSSV NNATVPSQPQ ENVNQGGLSN
601: PQLTHSQGST GIAPGPPLPH HLAALHPYAQ GGLPLGYASM IGYPSLPQSY AYLPPAAYQQ PYMNSGLFHQ GAAAAPNSGV KYPMPQYKSS VPLGSLPQPA
701: SMLSNYVGGF GTANGMPQNF ALNQSNPSAT TAPGFDGAMP SQYKDGNPYM SLQQGENPAM WMHGAGSRGM PPLAANPLYG YQGQQGYQGQ QGHQGGLRQG
801: QMPSQYGAAL GQSQPGLGPE HRNPSDGNLS AAAAAQANQM WPNGY
101: PFYKPAYRGS KVGSDRGGRV YSGPGDSTAS AKGPIKKETE LLPPPNTSTS DAVKDSNPME TISEAGNLAD AKSTSFQPPQ VQHGWGGVPG RPSLAEIVKM
201: GRPQAKSGAR PVANNAAKPV GGSVAANANL NTVLPSEGDR VTAEKLPNGT IQSPSVPKED SVGILPPGQG SDVPEGIGAA SANVSAPRSF TLEVKNDDAG
301: DANEQTKETS GSNATGLTSP GPLSPSDKGT ILNNDLIEKT DVYLSDEHSF EHNQNADSNG DMSTTAYELE HLTIHEENRP KPSDDNPAVI IPGHLQVSNA
401: DFAHLTFGSF VSGTLDAPCS MMPANSDVEV AAVPDNQSGD QCDARIHEFE NKETVTPAAN EYIASAPDSN AENPDITSAQ QSEVGRADSL DVTNNTEYNL
501: SSDYATSSAV QPEPTVQTYL QDNRQMQNIS PLSNFMQGNM PNGLLPPAIP PFRELDPAFS LLLTNPPLAT MVHGTPQSSV NNATVPSQPQ ENVNQGGLSN
601: PQLTHSQGST GIAPGPPLPH HLAALHPYAQ GGLPLGYASM IGYPSLPQSY AYLPPAAYQQ PYMNSGLFHQ GAAAAPNSGV KYPMPQYKSS VPLGSLPQPA
701: SMLSNYVGGF GTANGMPQNF ALNQSNPSAT TAPGFDGAMP SQYKDGNPYM SLQQGENPAM WMHGAGSRGM PPLAANPLYG YQGQQGYQGQ QGHQGGLRQG
801: QMPSQYGAAL GQSQPGLGPE HRNPSDGNLS AAAAAQANQM WPNGY
001: MSSSKVGGGA RKGIQDIPSG SRKIVQSLTE IVNSPEAEIY AMLKECNMDP NETVSRLLSQ DPFHEVKSKK EKKKETRDIS DSRPRGANNT YNRGARGGSA
101: RYAGRSGSTH FSSTDSGNFQ GKSTNKKESG TQGYTSSWSS ASGVANTYQT PHSEPIAMEN KLPPVTLGDG ISSSKSASGH QTAWFGAPGQ RSMAEVVKMG
201: RPQNKTTKQN VNVGSEINHE HEVNANQQAP VKDEWPSIEK PLAPSTSSLS VAPAESEVRN GLADFQSDRG DQYLKDRLEN IHIAESGPSE SRGVDHVQAD
301: SVQEDESVVS SEIDDNPYQT QSHPVEHHKD EDDVSSGSAS FQQLDSHDQE VSHEEDRPAV VIPNHLLIHT EECAQLSFGS FGGFGSRPLS NSVEATSDVA
401: PQIEHSDARN TEFYGDEHLG STTNGNMVHT PATGNYDDSL ETRREVLKQE NSEGAQEHQY TFTQSEQGYA YENAKQQQMN SAYDASHTNS QNQMHNLDSL
501: SNVMQGYSHS VPNTLLAQTA QNARELDFQY SPFSAQQSMQ SRTSNNASSL GGQSISMPEA LRGSGIPATQ PTQQTLPGAN IATGPALPQQ LPMHYSQPTL
601: PLTHYANMIG YPLMPQNYPY MPSAFQQTFA GNSAYHQQLA ALLPQYKTNV SPGNLPQSAT APASAYGFGN STNVGSAGNF PLNQQSATTG TTLGYEDVLS
701: SQYKENHLLA LQQQQQQQQH QQQNENSAMW HQGHGSRTMS GVPTNTYYNL QAQQQLQLQH QQQQQQAQQA AGGYRQAQQQ QHYGSHGYPN YYQSQTEMSL
801: ERQQQNPRDG AGSQAGQPSN QSQQQLWQNS Y
101: RYAGRSGSTH FSSTDSGNFQ GKSTNKKESG TQGYTSSWSS ASGVANTYQT PHSEPIAMEN KLPPVTLGDG ISSSKSASGH QTAWFGAPGQ RSMAEVVKMG
201: RPQNKTTKQN VNVGSEINHE HEVNANQQAP VKDEWPSIEK PLAPSTSSLS VAPAESEVRN GLADFQSDRG DQYLKDRLEN IHIAESGPSE SRGVDHVQAD
301: SVQEDESVVS SEIDDNPYQT QSHPVEHHKD EDDVSSGSAS FQQLDSHDQE VSHEEDRPAV VIPNHLLIHT EECAQLSFGS FGGFGSRPLS NSVEATSDVA
401: PQIEHSDARN TEFYGDEHLG STTNGNMVHT PATGNYDDSL ETRREVLKQE NSEGAQEHQY TFTQSEQGYA YENAKQQQMN SAYDASHTNS QNQMHNLDSL
501: SNVMQGYSHS VPNTLLAQTA QNARELDFQY SPFSAQQSMQ SRTSNNASSL GGQSISMPEA LRGSGIPATQ PTQQTLPGAN IATGPALPQQ LPMHYSQPTL
601: PLTHYANMIG YPLMPQNYPY MPSAFQQTFA GNSAYHQQLA ALLPQYKTNV SPGNLPQSAT APASAYGFGN STNVGSAGNF PLNQQSATTG TTLGYEDVLS
701: SQYKENHLLA LQQQQQQQQH QQQNENSAMW HQGHGSRTMS GVPTNTYYNL QAQQQLQLQH QQQQQQAQQA AGGYRQAQQQ QHYGSHGYPN YYQSQTEMSL
801: ERQQQNPRDG AGSQAGQPSN QSQQQLWQNS Y
Arabidopsis Description
Kinase-related protein of unknown function (DUF1296) [Source:TAIR;Acc:AT1G29350]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.