Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G420300.1 | Wheat | nucleus | 96.36 | 97.16 |
| TraesCS1B01G450700.1 | Wheat | nucleus | 91.9 | 91.79 |
| HORVU1Hr1G091730.18 | Barley | mitochondrion | 88.03 | 87.01 |
| Os05t0581800-01 | Rice | nucleus | 63.97 | 63.97 |
| KXG22612 | Sorghum | nucleus | 61.74 | 63.22 |
| Zm00001d039138_P012 | Maize | nucleus | 60.68 | 62.36 |
| Zm00001d009683_P004 | Maize | nucleus | 59.51 | 59.58 |
| KRH38470 | Soybean | endoplasmic reticulum | 4.93 | 53.16 |
| CDY61561 | Canola | cytosol | 3.87 | 50.0 |
| Solyc09g018250.2.1 | Tomato | plastid | 5.16 | 41.51 |
| GSMUA_Achr7P25510_001 | Banana | nucleus | 36.38 | 37.13 |
| GSMUA_Achr4P14940_001 | Banana | nucleus | 36.74 | 36.87 |
| VIT_10s0003g02740.t01 | Wine grape | nucleus | 35.68 | 34.9 |
| GSMUA_Achr4P07880_001 | Banana | nucleus | 37.21 | 34.84 |
| VIT_19s0014g03260.t01 | Wine grape | nucleus | 8.57 | 34.43 |
| TraesCS3D01G241600.2 | Wheat | nucleus | 33.92 | 34.28 |
| TraesCS1D01G411700.1 | Wheat | nucleus | 34.74 | 34.02 |
| GSMUA_Achr3P31170_001 | Banana | nucleus | 33.8 | 32.8 |
| Solyc03g005750.2.1 | Tomato | nucleus | 32.39 | 32.74 |
| PGSC0003DMT400007972 | Potato | nucleus | 32.04 | 32.66 |
| Solyc02g071180.2.1 | Tomato | nucleus | 31.92 | 32.65 |
| KRH36716 | Soybean | nucleus | 31.69 | 32.22 |
| KRH42968 | Soybean | nucleus | 31.34 | 31.9 |
| KRH11725 | Soybean | nucleus | 31.22 | 31.67 |
| KRH59101 | Soybean | nucleus | 30.4 | 30.65 |
| CDY43334 | Canola | nucleus | 29.34 | 30.41 |
| AT1G29370.1 | Thale cress | nucleus | 29.34 | 30.08 |
| CDX90188 | Canola | nucleus | 28.99 | 30.05 |
| AT1G29350.1 | Thale cress | nucleus | 29.11 | 29.84 |
| Bra030134.1-P | Field mustard | nucleus | 27.23 | 29.67 |
| Bra021900.1-P | Field mustard | nucleus | 28.52 | 29.6 |
| Bra010832.1-P | Field mustard | nucleus | 28.52 | 29.56 |
| CDY15632 | Canola | nucleus | 27.23 | 29.52 |
| CDY43685 | Canola | nucleus | 28.64 | 29.4 |
| CDY48333 | Canola | nucleus | 28.29 | 29.28 |
| CDX94662 | Canola | nucleus | 27.35 | 28.94 |
| Bra013287.1-P | Field mustard | nucleus | 26.17 | 28.59 |
| CDY61669 | Canola | nucleus | 24.77 | 28.51 |
| Bra022970.1-P | Field mustard | nucleus | 27.0 | 28.43 |
| CDX78828 | Canola | nucleus | 23.12 | 28.22 |
| CDX84653 | Canola | nucleus | 26.88 | 28.17 |
| Bra032310.1-P | Field mustard | nucleus | 28.05 | 27.82 |
| CDX99817 | Canola | nucleus | 20.19 | 27.74 |
| AT4G18150.1 | Thale cress | nucleus | 24.53 | 27.57 |
| CDY61562 | Canola | nucleus | 24.18 | 27.03 |
| CDX76544 | Canola | nucleus | 16.55 | 24.78 |
| CDY37665 | Canola | cytosol, nucleus, plastid | 19.48 | 24.78 |
| CDY08888 | Canola | nucleus | 16.43 | 24.26 |
| Bra021022.1-P | Field mustard | nucleus | 16.9 | 23.19 |
| AT5G46380.2 | Thale cress | nucleus | 15.38 | 19.79 |
| TraesCS5D01G175100.1 | Wheat | nucleus | 16.9 | 17.48 |
| CDY11787 | Canola | nucleus | 14.79 | 17.1 |
| TraesCS7D01G167400.1 | Wheat | cytosol, nucleus | 14.55 | 14.32 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G428100.1 | EnsemblPlantsGene:TraesCS1D01G428100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:GIP1 |
| InterPro:UBA-like_sf | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF25 | PFAM:PF06972 | SEG:seg | SUPFAM:SSF46934 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1D:+:480432551..480438375
Molecular Weight (calculated)
88953.1 Da
IEP (calculated)
4.937
GRAVY (calculated)
-0.603
Length
852 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGGGRGGGG GGGGGRGQRE QQARGAAAAV AGDGAEIPPA SRKLVQGLKG ILADRTEAEI YATLLDCAMD PDVAVERLIS QDPFHEVRRK RSNKKEVKAP
101: QETRSRPFYK PAYRGSKVGL DRGGRGYSGP GDSTASAKGP IKKETELLPP PNTSTSDAVK GSNPMETILE AGNLADAKST SFQPPQVQHG WGGVPGRPSL
201: AEIVKMGRPQ AKSGARPVAN NAAKPAVGGS VAANANLNTV LPSEGDRVIA EKLPNGTIQS PSVPKEDSVG ILPPGQGSDV PEGIGAASAN VSAPRSFTLE
301: VKNDGAGDAN EQTKETSASN ATGLTSPGPL SPSDEGTVLN NDMIEKTDGY LSDEHSFEHN QNADSNGDMS TTAYQLEDLT IHEENRPKPS DDNPAVIIPG
401: HLQVSNADFA HLTFGSFVSG TLDASCSMMP ANSDVEVAAV PDNQSGDQCD VRIHEFENKE TVTPAANEYI ASAPDSNAEN PDITSAQQSD VGRADLLDVT
501: NNTEYNLSSD YATSSAVQPE PTVQTYLQDN RQMQNISPLS NFMQGNMPNG LLPPAMPPFR ELDPAFSLLL TNPPLATMVH GTPQSSVNNA TVSSQPQENV
601: NQGGLSNPQL THSQGSTGIA PGPPLPHHLA ALHPYAQGGL PLGYANMIGY PSLPQSYAYL PPAAYQQAYM NSGLFHQGAA AAPNSGVKYP MPQYKSNVPL
701: GSLPQPASML SNYVGGFGTA NGMPQNFALN QSNPSATTAP GFDGAMPSQY KDGNPYMSLQ QGENPAMWMH GAGSRGMPPL AANPLYGYQG QQGYQGQQGH
801: QGGLRQGQMP SQYGAALGQS QPGLGPEHRN PSDGNLSAAA AAQANQMWPN GY
101: QETRSRPFYK PAYRGSKVGL DRGGRGYSGP GDSTASAKGP IKKETELLPP PNTSTSDAVK GSNPMETILE AGNLADAKST SFQPPQVQHG WGGVPGRPSL
201: AEIVKMGRPQ AKSGARPVAN NAAKPAVGGS VAANANLNTV LPSEGDRVIA EKLPNGTIQS PSVPKEDSVG ILPPGQGSDV PEGIGAASAN VSAPRSFTLE
301: VKNDGAGDAN EQTKETSASN ATGLTSPGPL SPSDEGTVLN NDMIEKTDGY LSDEHSFEHN QNADSNGDMS TTAYQLEDLT IHEENRPKPS DDNPAVIIPG
401: HLQVSNADFA HLTFGSFVSG TLDASCSMMP ANSDVEVAAV PDNQSGDQCD VRIHEFENKE TVTPAANEYI ASAPDSNAEN PDITSAQQSD VGRADLLDVT
501: NNTEYNLSSD YATSSAVQPE PTVQTYLQDN RQMQNISPLS NFMQGNMPNG LLPPAMPPFR ELDPAFSLLL TNPPLATMVH GTPQSSVNNA TVSSQPQENV
601: NQGGLSNPQL THSQGSTGIA PGPPLPHHLA ALHPYAQGGL PLGYANMIGY PSLPQSYAYL PPAAYQQAYM NSGLFHQGAA AAPNSGVKYP MPQYKSNVPL
701: GSLPQPASML SNYVGGFGTA NGMPQNFALN QSNPSATTAP GFDGAMPSQY KDGNPYMSLQ QGENPAMWMH GAGSRGMPPL AANPLYGYQG QQGYQGQQGH
801: QGGLRQGQMP SQYGAALGQS QPGLGPEHRN PSDGNLSAAA AAQANQMWPN GY
001: MSSSKVGGGA RKGIQDIPSG SRKIVQSLTE IVNSPEAEIY AMLKECNMDP NETVSRLLSQ DPFHEVKSKK EKKKETRDIS DSRPRGANNT YNRGARGGSA
101: RYAGRSGSTH FSSTDSGNFQ GKSTNKKESG TQGYTSSWSS ASGVANTYQT PHSEPIAMEN KLPPVTLGDG ISSSKSASGH QTAWFGAPGQ RSMAEVVKMG
201: RPQNKTTKQN VNVGSEINHE HEVNANQQAP VKDEWPSIEK PLAPSTSSLS VAPAESEVRN GLADFQSDRG DQYLKDRLEN IHIAESGPSE SRGVDHVQAD
301: SVQEDESVVS SEIDDNPYQT QSHPVEHHKD EDDVSSGSAS FQQLDSHDQE VSHEEDRPAV VIPNHLLIHT EECAQLSFGS FGGFGSRPLS NSVEATSDVA
401: PQIEHSDARN TEFYGDEHLG STTNGNMVHT PATGNYDDSL ETRREVLKQE NSEGAQEHQY TFTQSEQGYA YENAKQQQMN SAYDASHTNS QNQMHNLDSL
501: SNVMQGYSHS VPNTLLAQTA QNARELDFQY SPFSAQQSMQ SRTSNNASSL GGQSISMPEA LRGSGIPATQ PTQQTLPGAN IATGPALPQQ LPMHYSQPTL
601: PLTHYANMIG YPLMPQNYPY MPSAFQQTFA GNSAYHQQLA ALLPQYKTNV SPGNLPQSAT APASAYGFGN STNVGSAGNF PLNQQSATTG TTLGYEDVLS
701: SQYKENHLLA LQQQQQQQQH QQQNENSAMW HQGHGSRTMS GVPTNTYYNL QAQQQLQLQH QQQQQQAQQA AGGYRQAQQQ QHYGSHGYPN YYQSQTEMSL
801: ERQQQNPRDG AGSQAGQPSN QSQQQLWQNS Y
101: RYAGRSGSTH FSSTDSGNFQ GKSTNKKESG TQGYTSSWSS ASGVANTYQT PHSEPIAMEN KLPPVTLGDG ISSSKSASGH QTAWFGAPGQ RSMAEVVKMG
201: RPQNKTTKQN VNVGSEINHE HEVNANQQAP VKDEWPSIEK PLAPSTSSLS VAPAESEVRN GLADFQSDRG DQYLKDRLEN IHIAESGPSE SRGVDHVQAD
301: SVQEDESVVS SEIDDNPYQT QSHPVEHHKD EDDVSSGSAS FQQLDSHDQE VSHEEDRPAV VIPNHLLIHT EECAQLSFGS FGGFGSRPLS NSVEATSDVA
401: PQIEHSDARN TEFYGDEHLG STTNGNMVHT PATGNYDDSL ETRREVLKQE NSEGAQEHQY TFTQSEQGYA YENAKQQQMN SAYDASHTNS QNQMHNLDSL
501: SNVMQGYSHS VPNTLLAQTA QNARELDFQY SPFSAQQSMQ SRTSNNASSL GGQSISMPEA LRGSGIPATQ PTQQTLPGAN IATGPALPQQ LPMHYSQPTL
601: PLTHYANMIG YPLMPQNYPY MPSAFQQTFA GNSAYHQQLA ALLPQYKTNV SPGNLPQSAT APASAYGFGN STNVGSAGNF PLNQQSATTG TTLGYEDVLS
701: SQYKENHLLA LQQQQQQQQH QQQNENSAMW HQGHGSRTMS GVPTNTYYNL QAQQQLQLQH QQQQQQAQQA AGGYRQAQQQ QHYGSHGYPN YYQSQTEMSL
801: ERQQQNPRDG AGSQAGQPSN QSQQQLWQNS Y
Arabidopsis Description
Kinase-related protein of unknown function (DUF1296) [Source:TAIR;Acc:AT1G29350]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.