Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G403900.1 | Wheat | nucleus | 98.17 | 98.85 |
| TraesCS1D01G411700.1 | Wheat | nucleus | 98.28 | 98.62 |
| HORVU1Hr1G089280.1 | Barley | nucleus | 95.53 | 88.07 |
| Os05t0566900-01 | Rice | extracellular | 73.54 | 75.35 |
| KXG22544 | Sorghum | nucleus | 65.75 | 67.06 |
| Zm00001d009591_P006 | Maize | nucleus | 62.31 | 63.48 |
| Zm00001d039041_P007 | Maize | nucleus | 64.26 | 62.2 |
| KRH38470 | Soybean | endoplasmic reticulum | 5.61 | 62.03 |
| TraesCS3B01G269500.1 | Wheat | nucleus | 58.53 | 60.47 |
| Zm00001d015193_P001 | Maize | nucleus, plastid | 15.23 | 59.38 |
| CDY61561 | Canola | cytosol | 4.01 | 53.03 |
| Solyc09g018250.2.1 | Tomato | plastid | 5.5 | 45.28 |
| GSMUA_Achr7P25510_001 | Banana | nucleus | 41.92 | 43.83 |
| GSMUA_Achr4P14940_001 | Banana | nucleus | 42.27 | 43.46 |
| GSMUA_Achr3P31170_001 | Banana | nucleus | 41.24 | 41.0 |
| GSMUA_Achr4P07880_001 | Banana | nucleus | 41.7 | 40.0 |
| VIT_10s0003g02740.t01 | Wine grape | nucleus | 39.18 | 39.27 |
| Solyc02g071180.2.1 | Tomato | nucleus | 37.34 | 39.14 |
| PGSC0003DMT400007972 | Potato | nucleus | 37.46 | 39.11 |
| KRH59101 | Soybean | nucleus | 36.2 | 37.4 |
| KRH42968 | Soybean | nucleus | 35.62 | 37.16 |
| Solyc03g005750.2.1 | Tomato | nucleus | 35.85 | 37.13 |
| CDY48333 | Canola | nucleus | 34.94 | 37.06 |
| CDY15632 | Canola | nucleus | 33.22 | 36.9 |
| CDY43334 | Canola | nucleus | 34.71 | 36.86 |
| KRH36716 | Soybean | nucleus | 35.28 | 36.75 |
| AT1G29370.1 | Thale cress | nucleus | 34.94 | 36.7 |
| Bra030134.1-P | Field mustard | nucleus | 32.88 | 36.7 |
| CDX90188 | Canola | nucleus | 34.36 | 36.5 |
| Bra010832.1-P | Field mustard | nucleus | 34.36 | 36.5 |
| AT1G29350.1 | Thale cress | nucleus | 34.59 | 36.34 |
| KRH11725 | Soybean | nucleus | 34.48 | 35.83 |
| CDX94662 | Canola | nucleus | 32.99 | 35.78 |
| Bra021900.1-P | Field mustard | nucleus | 33.56 | 35.69 |
| CDY43685 | Canola | nucleus | 33.79 | 35.54 |
| Bra032310.1-P | Field mustard | nucleus | 34.71 | 35.27 |
| CDX99817 | Canola | nucleus | 24.86 | 35.0 |
| Bra022970.1-P | Field mustard | nucleus | 32.19 | 34.73 |
| CDX84653 | Canola | nucleus | 32.07 | 34.44 |
| VIT_19s0014g03260.t01 | Wine grape | nucleus | 8.36 | 34.43 |
| CDY61562 | Canola | nucleus | 29.67 | 33.99 |
| CDX78828 | Canola | nucleus | 26.35 | 32.95 |
| CDY61669 | Canola | nucleus | 27.84 | 32.84 |
| Bra013287.1-P | Field mustard | nucleus | 28.75 | 32.18 |
| TraesCS1B01G450700.1 | Wheat | nucleus | 30.47 | 31.18 |
| CDY37665 | Canola | cytosol, nucleus, plastid | 23.83 | 31.04 |
| AT4G18150.1 | Thale cress | nucleus | 26.12 | 30.08 |
| CDY08888 | Canola | nucleus | 15.69 | 23.74 |
| CDX76544 | Canola | nucleus | 15.12 | 23.2 |
| Bra021022.1-P | Field mustard | nucleus | 16.04 | 22.54 |
| CDY11787 | Canola | nucleus | 17.75 | 21.03 |
| AT5G46380.2 | Thale cress | nucleus | 15.46 | 20.39 |
| TraesCS5B01G167400.1 | Wheat | nucleus | 18.67 | 19.78 |
| TraesCS7B01G071400.2 | Wheat | nucleus | 15.23 | 15.3 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G433400.1 | EnsemblPlantsGene:TraesCS1B01G433400 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:GIP1 |
| InterPro:UBA-like_sf | PANTHER:PTHR12758 | PANTHER:PTHR12758:SF35 | PFAM:PF06972 | SEG:seg | SUPFAM:SSF46934 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1B:+:658060742..658069155
Molecular Weight (calculated)
92915.3 Da
IEP (calculated)
5.019
GRAVY (calculated)
-0.723
Length
873 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGGGGGAGG GGKGAAAAGP VPQASRKLVQ SLKEIVNRPD AEIYAALREC SMDPDEAVSR LLSQDTFQEV KSKRDKKKEV KETPEPRSRA ANNATSRGVR
101: GGPDRGGRNN SAYNSSIDNM TSRSSVSGSG MQSTNSTQKQ TVQSSSVNKN LVVDAPSVPP QTSSGFQHGW SGTPGQLSMA DIVKMGGRPQ AQGKPSTKTV
201: VTADKGYAGQ YPSLPTTVNQ NAKQSASTVA PTELDQGLPS AQDSVLVKDH SHTAADNKQK YDNDWSPQDD PPAGNQSSLP ETSGDPSLFE APLHPSTHVA
301: DAVYLHENSY LDDNISAAMR SGNASERHLD HYGGNSEYND GLLQNSSTYL AQTHSHIEDQ AEESNADVSA AANFQGLSLH DEELAATKFA EDNPAVIIPD
401: HLQVANTGCA GLSFGSFGSG AFSGLLPPPK STENNVELPI VEESEPIDHT DTRDQDFYEI PPNSPPNENL EEIMGASTEN LDVPSVQQPD VLRQEILDDP
501: SGVQYNLPSV SSHAYANPAQ PNAMDAMQGS NQAHTLSHLS SLLQSNTLQQ HNLLGSNMAP LRDLDFGLSP LLAAQAQSMG ARYNSAAPTT TGMQEPMKPG
601: VFSNTQSTQN LPSTSIQMAP SLPQQLVHPY SQPTLPIAPF ANMIGANMIG YNPYLAQNYP AYLPSTAFQQ AYSSNGQFHQ SAAAVPGAGM KYSMPQYKNN
701: MSAANLQQQQ QPSSVISGYA GFGSSSNLPG NFALNQNAAP PSANLGFDEA LSAQYKEANQ YMALQQQGDN SAMWLHGAGS RTASAIPPTQ FYGYQGQSQQ
801: QGAFRQAQQP QQPSQYGGHG YPAFYHSQGG GMAQEHHPQN PADGALNGYQ AAQQQQQQQQ QPSHQSWQQH ANY
101: GGPDRGGRNN SAYNSSIDNM TSRSSVSGSG MQSTNSTQKQ TVQSSSVNKN LVVDAPSVPP QTSSGFQHGW SGTPGQLSMA DIVKMGGRPQ AQGKPSTKTV
201: VTADKGYAGQ YPSLPTTVNQ NAKQSASTVA PTELDQGLPS AQDSVLVKDH SHTAADNKQK YDNDWSPQDD PPAGNQSSLP ETSGDPSLFE APLHPSTHVA
301: DAVYLHENSY LDDNISAAMR SGNASERHLD HYGGNSEYND GLLQNSSTYL AQTHSHIEDQ AEESNADVSA AANFQGLSLH DEELAATKFA EDNPAVIIPD
401: HLQVANTGCA GLSFGSFGSG AFSGLLPPPK STENNVELPI VEESEPIDHT DTRDQDFYEI PPNSPPNENL EEIMGASTEN LDVPSVQQPD VLRQEILDDP
501: SGVQYNLPSV SSHAYANPAQ PNAMDAMQGS NQAHTLSHLS SLLQSNTLQQ HNLLGSNMAP LRDLDFGLSP LLAAQAQSMG ARYNSAAPTT TGMQEPMKPG
601: VFSNTQSTQN LPSTSIQMAP SLPQQLVHPY SQPTLPIAPF ANMIGANMIG YNPYLAQNYP AYLPSTAFQQ AYSSNGQFHQ SAAAVPGAGM KYSMPQYKNN
701: MSAANLQQQQ QPSSVISGYA GFGSSSNLPG NFALNQNAAP PSANLGFDEA LSAQYKEANQ YMALQQQGDN SAMWLHGAGS RTASAIPPTQ FYGYQGQSQQ
801: QGAFRQAQQP QQPSQYGGHG YPAFYHSQGG GMAQEHHPQN PADGALNGYQ AAQQQQQQQQ QPSHQSWQQH ANY
001: MGGGGGSVSN ANGGVPASSR KVIQDLKEIV ECSELEIYAM LVECDMNPDE AVNRLLSQDT FHEVKSKREK KKETKDHADS WTRNVPNRGA RSGNDSYNTS
101: RGGRNKYKSN ETGKIQGVPV NRRENGARNH LAGSSASSGL LGRLPGLLRR QPPSNSDLPS SKVKKAPTTP SDAVTLSSLP FPAYQSAWAS ANPGQRTMAE
201: IVKMGRPNLQ KNVALPRSSE AQESSSKAPL KDECPSIEKQ DVSYLSSSVL KPSAESKISS DQFSESQHLD ETLLDDIHRE TKTYPTGSPP DVDHNPLASV
301: SSRNLVDDES RDSLVCDDEN NKAERHSYEE NQDEDVSTSV ATGFQQLTIY NEEEQEALPK EEKHAVIIPN HLQVHTSECL HLMFGCFSSG IGSGQPSALN
401: DNLEEPLVAE DDSSFRHPDT NFYGEEEAEQ PRNAVTNEQV SYQIDSSYRF ENNQLFHPPS ETNPQRQNLD TYPNIMQQGY TSSLPNTLLP SGIQDGRESN
501: LHYSPFTTLY NTEISMAEAL RAASISPQNA IPSAGQQAAT LAQHLALNPY SHQPEMPLGH YGNLISYPFM AQCYNPFMLS AFQQVFPTGN HQSLVDMLMQ
601: YKTQTTAPPV PPPSAYGFGG GAVSSNNFPL NPTSAANSYE DVLSSQFNES NHLASSLQQQ NEKTTAWHQG QQANSRVVPG SGYYSYPGHQ NQQPPGFRQA
701: QQLQHQQQSS QQQQQQQHYG GHGYVSPYHS QAVMSLEHLH HQYQQQQNAR DASKQSQQ
101: RGGRNKYKSN ETGKIQGVPV NRRENGARNH LAGSSASSGL LGRLPGLLRR QPPSNSDLPS SKVKKAPTTP SDAVTLSSLP FPAYQSAWAS ANPGQRTMAE
201: IVKMGRPNLQ KNVALPRSSE AQESSSKAPL KDECPSIEKQ DVSYLSSSVL KPSAESKISS DQFSESQHLD ETLLDDIHRE TKTYPTGSPP DVDHNPLASV
301: SSRNLVDDES RDSLVCDDEN NKAERHSYEE NQDEDVSTSV ATGFQQLTIY NEEEQEALPK EEKHAVIIPN HLQVHTSECL HLMFGCFSSG IGSGQPSALN
401: DNLEEPLVAE DDSSFRHPDT NFYGEEEAEQ PRNAVTNEQV SYQIDSSYRF ENNQLFHPPS ETNPQRQNLD TYPNIMQQGY TSSLPNTLLP SGIQDGRESN
501: LHYSPFTTLY NTEISMAEAL RAASISPQNA IPSAGQQAAT LAQHLALNPY SHQPEMPLGH YGNLISYPFM AQCYNPFMLS AFQQVFPTGN HQSLVDMLMQ
601: YKTQTTAPPV PPPSAYGFGG GAVSSNNFPL NPTSAANSYE DVLSSQFNES NHLASSLQQQ NEKTTAWHQG QQANSRVVPG SGYYSYPGHQ NQQPPGFRQA
701: QQLQHQQQSS QQQQQQQHYG GHGYVSPYHS QAVMSLEHLH HQYQQQQNAR DASKQSQQ
Arabidopsis Description
Kinase-related protein of unknown function (DUF1296) [Source:TAIR;Acc:AT4G18150]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.