Factsheet for AT3G13222.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24202	Canola	nucleus	64.02	64.36
Bra039379.1-P	Field mustard	nucleus	44.27	64.03
CDY43361	Canola	nucleus	64.55	63.21
GSMUA_Achr1P09430_001	Banana	cytosol	7.41	47.19
Os09t0261400-01	Rice	plasma membrane	5.11	36.25
AT1G55820.1	Thale cress	nucleus	33.33	32.87
AT3G07660.1	Thale cress	nucleus	25.93	17.48
AT1G29350.1	Thale cress	nucleus	21.87	14.92
AT1G29370.1	Thale cress	nucleus	21.87	14.92
AT3G13990.1	Thale cress	nucleus	20.46	13.68
AT4G18150.1	Thale cress	nucleus	17.46	13.06
AT5G46380.2	Thale cress	nucleus	14.64	12.54

Protein Annotations

MapMan:35.1	EntrezGene:820513	UniProt:A0A178VMU4	ProteinID:AEE75313.1	EMBL:AF344829	ArrayExpress:AT3G13222
EnsemblPlantsGene:AT3G13222	RefSeq:AT3G13222	TAIR:AT3G13222	RefSeq:AT3G13222-TAIR-G	EnsemblPlants:AT3G13222.1	TAIR:AT3G13222.1
EMBL:AY063883	EMBL:AY142588	Unigene:At.27156	ProteinID:BAB01415.1	InterPro:GIP1	Symbol:GIP1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0008150	GO:GO:0042802	GO:GO:0043388	GO:GO:0051082	RefSeq:NP_187929.4
ProteinID:OAP06122.1	PFAM:PF06972	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009049	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR12758	PANTHER:PTHR12758:SF30
UniProt:Q8VZS6	SUPFAM:SSF46934	InterPro:UBA-like_sf	UniParc:UPI00000AC718	SEG:seg	:

Description

GIP1GBF-interacting protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZS6]

Coordinates

chr3:-:4250958..4254278

Molecular Weight (calculated)

61815.7 Da

IEP (calculated)

6.125

GRAVY (calculated)

-0.647

Length

567 amino acids

Sequence
(BLAST)

001: MSRISGDGGS RVSIPADLLQ TIQNIREVTG KQHSDEDIFS VFKECFSDPH ETTQKLLYLD TFHEVRSKRE RKKENLVPNT QGRGRTGRKN FASSYTDASN
101: GRSAAFKKQS GANHIIGGSG TASSAPNNAR NDTKPSSIMA PNPISLPSGI SNQKIQDAII SPVDKVDTEE QPLSKATSSS KDVVEPDKSK ESSVSVAVSD
201: SVVENDTQYA VVETFQIPQQ SERVIKSEVA ASKCKNESLL KSDVGERPHV TFPVHIQVAK MLENGLTFGS FDSNFVREAS SDKFTIGCDD SNIESSHGTA
301: ASARKDISTF SQDKNHEISN SAAQNELTLQ PDQTVLPEEG SEGDKVKNEV LPITDTHQAA KCDAPPISYP DQYSLAAAQQ AMHLYRQQYS LNYFPYGPYF
401: PPYYMPQPYI HQYLSPNGFQ QQSYLPPGDD APAPPGAELP LTHIKPGSDI GNSPPTTIPF SYTSYAFNHI PSAATINATH KEEKKENMYT TGPLSLANLQ
501: ASPMYNLSLQ GQPIAFPTMQ AGIRGLYQQT QPILAPLSIS ARTEPIGPSH VTNQQPQAAR TNLGNNY

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.