Factsheet for Bra037488.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra016654.1-P
Bra021524.1-P
Bra023825.1-P
Bra026120.1-P
Bra026756.1-P
Bra027380.1-P
Bra033264.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48385.1	Bra033264.1-P	AT1G01440.1	21798944
AT5G48385.1	Bra016654.1-P	AT1G15570.1	21798944
AT5G48385.1	Bra026120.1-P	AT1G15570.1	21798944
AT5G48385.1	Bra026756.1-P	AT1G15570.1	21798944
AT5G48385.1	Bra021524.1-P	AT3G13990.1	21798944
AT5G48385.1	Bra027380.1-P	AT3G13990.1	21798944
AT5G48385.1	Bra023825.1-P	AT3G22440.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86307	Canola	nucleus	100.0	62.69
GSMUA_Achr2P05710_001	Banana	nucleus	0.11	0.52
Bra020704.1-P	Field mustard	cytosol	0.21	0.39
Bra036176.1-P	Field mustard	cytosol	0.21	0.38
Bra037489.1-P	Field mustard	cytosol	0.21	0.37
AT5G48385.1	Thale cress	cytosol	0.21	0.36
Bra008624.1-P	Field mustard	cytosol	0.11	0.22
Bra023207.1-P	Field mustard	cytosol	0.11	0.22
Zm00001d019890_P001	Maize	nucleus	0.11	0.19
Bra023825.1-P	Field mustard	cytosol, nucleus, plastid	0.11	0.19
Zm00001d005107_P001	Maize	cytosol	0.11	0.19
Solyc06g082930.2.1	Tomato	nucleus	0.11	0.19
EES02294	Sorghum	nucleus	0.11	0.19
Solyc06g007640.2.1	Tomato	nucleus	0.11	0.19
HORVU5Hr1G051330.1	Barley	cytosol	0.11	0.19
TraesCS5A01G168100.1	Wheat	cytosol	0.11	0.19
GSMUA_Achr8P29000_001	Banana	nucleus	0.11	0.19
GSMUA_Achr9P08130_001	Banana	cytosol	0.11	0.19
Os09t0248300-01	Rice	cytosol	0.11	0.18
KRH66280	Soybean	cytosol	0.11	0.18
Os09t0248200-01	Rice	cytosol	0.11	0.18
PGSC0003DMT400071153	Potato	nucleus	0.11	0.18
KRH07289	Soybean	cytosol	0.11	0.18
KRH66282	Soybean	cytosol	0.11	0.18
PGSC0003DMT400053214	Potato	cytosol	0.11	0.18
TraesCS5D01G172300.2	Wheat	cytosol	0.11	0.18
TraesCS5B01G164900.2	Wheat	cytosol	0.11	0.18
VIT_07s0151g00650.t01	Wine grape	endoplasmic reticulum, extracellular	0.11	0.18
GSMUA_Achr3P16830_001	Banana	endoplasmic reticulum, golgi	0.11	0.17
Bra035723.1-P	Field mustard	plastid	0.0	0.0
Bra036105.1-P	Field mustard	nucleus	0.0	0.0
Bra029192.1-P	Field mustard	nucleus, plastid	0.0	0.0
Bra009973.1-P	Field mustard	cytosol	0.0	0.0
Zm00001d019892_P001	Maize	nucleus	0.0	0.0

Protein Annotations

Gene3D:1.25.40.10	MapMan:13.3.6.5.1.5	EnsemblPlantsGene:Bra037488	EnsemblPlants:Bra037488.1	EnsemblPlants:Bra037488.1-P	GO:GO:0000003
GO:GO:0000712	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0005737	GO:GO:0006139	GO:GO:0006259
GO:GO:0007049	GO:GO:0007129	GO:GO:0007131	GO:GO:0007140	GO:GO:0007143	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016043	GO:GO:0051321
GO:GO:0071139	InterPro:IPR011990	InterPro:IPR019734	UniProt:M4F8S6	PFAM:PF08631	PANTHER:PTHR31791
PANTHER:PTHR31791:SF8	SMART:SM00028	SUPFAM:SSF48452	InterPro:Spo22/ZIP4/TEX11	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat
UniParc:UPI000253F921	SEG:seg	:	:	:	:

Description

AT5G48390 (E=0.0) ATZIP4 | ATZIP4; binding

Coordinates

chrA06:+:21212722..21215992

Molecular Weight (calculated)

103574.0 Da

IEP (calculated)

7.092

GRAVY (calculated)

-0.084

Length

936 amino acids

Sequence
(BLAST)

001: MRIAEISTPD YRQLHRETES HTHHPLLSEI ELLIQQSESI SKDQPLPQTL PHSLRQSLTR LSQLAPLPGN SFKLTIWKLS FRLWNACVDL SNAAALQSSS
101: SSAESIANLR HAAADMLFLA RDVTGVPSPT IKSSLIYYRT GLVWHDLKKL DLASDCFERA TEILSKIDVA KITDAGERIL FLDLNLARSR TAWEISDRNL
201: AVTLLNRAKN MLFGSPDHYK ALSNQFLAFG KSALSREDDD CSLNDALRLM NESLDLCEKG LGTAKTREDT MEFKSMRVNT LRFISAVHLQ KGEFESVIKC
301: VKVLRSDGAD QHASLPVLAM KAWLGLGKHS EAEKELRSMV GNKDIPEAVW VSAVEAYFEV VGTAGAETAK GVFLGLLGRC HVSAKTALRV AHRVLGESRG
401: GDSGSRIRAN VVAQLVSDER VVALFAGEAV TNERKAIHSV LWNSASAHFG AKDFETSAEM FEKSMLYIPH DIENRVFRAK GFRVLCLCYL GLSQLDRAHE
501: YIEEAEKLEP NIHCSFLKFK IYLQRKEHSS AISQIDAMLS CLDFSPHYLS LAAHEAISCQ ALSVAVASLS KFLSFYPSGK TMPTTEVVVF RTLVTILTQD
601: AGSETEALNF MLQAQSRASK LGTECFFGSG ETGKRELKWF ALTSWNLGSR CGNAKKYELC GEFCRLASDF YSYLDTGESG ENTVMILRSL VLGVTAIIAL
701: EKQNKNTLTE TQVKLAAELL VRAGKIMSSL LSDGKDCIME PELIFMYTLT AYEIHGRLNN SAFQLLVVKT FAGSKSCNYN YLLQLGIFAS QSPRSNPDVS
801: TFALNECLSA LIASASPDYP TIALIIRKLI ALSSVHKGDT EDGEAIQKMY KQAYRIMVGL KEGDYPTDEG KWLAMTAWNR AALPVRLGQL ETAKKWLSIG
901: LEIAEKVSGM DTYRACMEDF LGGFQTKVSS EAADRI

Best Arabidopsis Sequence Match ( AT5G48390.1 )
(BLAST)

001: MRIAEITTPD LRLHHRETDS HTHHPLLSEI ELLIQQSEAI SKDQPLPQSL PISLRQFLTR LSQLAPFPDN SFKLTIWKLS FRLWNACVDL ANAASLQSSL
101: TSAENIANLR HVAADMLFLA KDVTGVPSPT IKSSLFYYKT GLVYHSLKKF DLASDCFERA TEIVSKIDIA KISDAGEKKL FLDLNLARSR TAWEISDRNL
201: AVTLLNRAKN LLFGSPDHYK SLSNQFLAFG KSSLSRGDDD CSLNDALRLM NEALDLCEKG LGTAKTREDT TEFTAMRIKT LRFISAVHLQ KGEFENVIKC
301: VKVLRNGGNG SDGADQHASL PVLAMKAWLG LGRHSEAEKE LRGMVGNNDI PEAVWVSAVE AYFEVVGTAG AETAKGVFLG LLGRCHVSAK AALRVAHRVL
401: GESRGGDNGS RIRANVVAQL VSDERVVALF ASEAVTKERK AIHSVLWNSA SDHFRAKDYE TSAEMFEKSM LYIPHDIENR VFRAKGFRVL CLCYLGLSQL
501: DRALEYIEEA EKLEPNIACS FLKFKIYLQK KEHSCAIGQI DAMTSCLDFS PDYLSLSAHE AISCQALPVA VASLSKFLSF YISGKKMPTT EVVVFRTLVT
601: ILTQDIGSET EALNFMLQAQ SRASKLGTEC FFGLGETGKR EQNWFAATCW NLGSRCGKEK KYELCGEFLR LASEFYGYID TDESGEDKLM ICRSIILSVT
701: AMIALEKQTK SALTETQVKL AAELLVRAGK IMSSSLSDGK DCIMEPELIF MYTLLAYDIH GRLNNSAFQL LVVKTFAGSK SCHYNYLLQL GIFASQSPQS
801: NPDVSTFALN ECLSALIASA SPEYPTIALI IRKLISIASV HKGDTDDEEA ILKMYKQAYR IMVGLKEGEY PTEEGKWLAM TAWNRAALPV RLGQFETAKK
901: WLSIGLEIAD KVTGMDTYKA CMQDYLAGFQ TKVSSA

Arabidopsis Description

ZIP4TPR repeat-containing protein ZIP4 [Source:UniProtKB/Swiss-Prot;Acc:B0M1H3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.