Factsheet for Bra023207.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 3
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67951	Canola	cytosol	98.92	98.92
AT1G31814.1	Thale cress	cytosol	66.59	64.9
Bra008624.1-P	Field mustard	cytosol	49.46	50.55
KRH73863	Soybean	nucleus	32.32	28.71
VIT_19s0090g01700.t01	Wine grape	cytosol	23.21	27.79
KRG98570	Soybean	cytosol, nucleus, plastid	32.54	27.32
KRH46301	Soybean	cytosol	31.67	26.74
Bra036176.1-P	Field mustard	cytosol	26.9	23.85
Bra020704.1-P	Field mustard	cytosol	26.68	23.7
Bra037489.1-P	Field mustard	cytosol	27.55	23.22
Bra023825.1-P	Field mustard	cytosol, nucleus, plastid	21.91	18.91
Bra035723.1-P	Field mustard	plastid	14.1	17.76
Bra029192.1-P	Field mustard	nucleus, plastid	18.22	14.31
Bra036105.1-P	Field mustard	nucleus	22.78	12.59
Bra009973.1-P	Field mustard	cytosol	21.69	11.51
PGSC0003DMT400036725	Potato	nucleus	2.6	4.41
Bra037488.1-P	Field mustard	cytosol	0.22	0.11

Protein Annotations

EnsemblPlants:Bra023207.1	EnsemblPlants:Bra023207.1-P	EnsemblPlantsGene:Bra023207	GO:GO:0000003	GO:GO:0007275	GO:GO:0008150
GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0010228	GO:GO:0030154	InterPro:Frigida
ncoils:Coil	PANTHER:PTHR31791	PANTHER:PTHR31791:SF13	PFAM:PF07899	SEG:seg	UniParc:UPI0002542376
UniProt:M4E356	MapMan:35.1	:	:	:	:

Description

AT1G31814 (E=7e-091) FRL2 | FRL2 (FRIGIDA LIKE 2)

Coordinates

chrA09:+:20708238..20709623

Molecular Weight (calculated)

51573.0 Da

IEP (calculated)

9.720

GRAVY (calculated)

-0.352

Length

461 amino acids

Sequence
(BLAST)

001: MAAGGTNQSK SRAPPTMTAP ESISLAINQI DEKKQKLKQA FDDLQPHRSL LSPSFNLSWS DIDSRFSSLQ SSLSDRFRLL QPDRTEPPPL LWPELRTFCD
101: NMDGKGLGKF MVDNSNKRLS IKPELAQAIR SSSSPAALVL DAIQGSYRCS PPSSARALDA RRTFVLLLEA LIEIKPSLTN ELRERARTLA SDWRLNICNK
201: SSEALGFLHL VVVFELVSVF KMEEILDYVF LISKCRQATT LSKMLGLDKT IVAGIVQKLL HTGRLLAAIT FIYEFEMTDR FRPVNVLKTS LYNSREAAKR
301: VCAEGGNSLK AQNEATDKEL SALRLVIRVI KERNLEIEFF EEDLEESVQE LENLRAQRRQ AAKPASPAIP PKRPRVATGN NLTTRTHNQQ PPLLPDPRHG
401: LQVNPFGFVN STVPGVNVPY GNQLAPYGSV PAPAIVARPV YYQQQTGYGL RPQYQPPYYP Q

Best Arabidopsis Sequence Match ( AT1G31814.1 )
(BLAST)

001: MTAAESIAAS INQIDEKKQK LKKAFDDLQA HRSLLSPSFN LSWSEIDSHF SSLQSSLFNR LQSAVTSSNS GNIETPTAVT TETPVLWPEL RKFCEKNDGK
101: GLGNYMIENS RKRLSINEEL PNAIRCSENP APLVLDAIEG SYHCSSPSSS SSARAIDVKR IFVLLLEALI EINANLTNDL RERARTIAYD WKPNIGNKPS
201: EALGFLHLVA AFELGSLFST EEICDYIFLI SKYKQATTIC KKIGLDRNRI GVLVQKFLDT GRLLVAIRFI YENEMVGEFE PVSILKTSLK NSREAAKRVC
301: AEGNYSLKVQ NEATDKELSA LRAVIKVVKE KNIESEFMEE KLEECVKELE DQKAQRKRAT KFNSPANPQQ PQEQKVDNKR PRVANGSSME YNLTIPPLRP
401: QQQPPLLPTP SQILQVNPYG LLSSILPGVA VPYGNPRALF GSVPAPASRP VFYVQQTGYG MPPPQYRPPY YPQ

Arabidopsis Description

FRL2Inactive FRIGIDA-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.