CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023207.1-P	Field mustard	cytosol	98.92	98.92
CDY12290	Canola	cytosol	85.68	88.76
AT1G31814.1	Thale cress	cytosol	66.38	64.69
CDY67200	Canola	cytosol, nucleus	15.62	51.43
CDX69452	Canola	cytosol	49.89	51.0
CDY55572	Canola	nucleus	39.48	50.84
KRH73863	Soybean	nucleus	32.97	29.29
VIT_19s0090g01700.t01	Wine grape	cytosol	23.43	28.05
CDY00062	Canola	cytosol, mitochondrion, nucleus, plastid	12.8	27.7
KRG98570	Soybean	cytosol, nucleus, plastid	32.97	27.69
KRH46301	Soybean	cytosol	32.1	27.11
CDY00066	Canola	cytosol	27.77	23.97
CDY05684	Canola	cytosol	26.25	23.4
CDY19713	Canola	cytosol	15.4	23.36
CDY48750	Canola	cytosol	26.46	23.15
CDX99994	Canola	peroxisome	16.27	22.46
CDY46317	Canola	cytosol, nucleus, plastid	22.56	19.81
CDY34252	Canola	cytosol, nucleus, plastid	21.91	19.35
CDY05835	Canola	cytosol, nucleus, plastid	14.1	18.11
CDY38318	Canola	nucleus	18.44	16.01
CDX71688	Canola	nucleus	18.87	14.87
CDX99996	Canola	extracellular	4.99	14.29
CDY38847	Canola	nucleus, plastid	18.22	14.09
CDY32645	Canola	nucleus	17.79	14.07
CDX86173	Canola	cytosol	21.91	11.69
CDX80668	Canola	cytosol, mitochondrion, plasma membrane	21.26	10.99
CDX86307	Canola	nucleus	27.33	8.44
CDX85335	Canola	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	27.11	7.73
CDY19712	Canola	cytosol, nucleus, peroxisome	5.64	5.43
CDX99995	Canola	cytosol, nucleus, peroxisome	5.64	5.43
PGSC0003DMT400036725	Potato	nucleus	2.6	4.41

Protein Annotations

EnsemblPlants:CDY67951	EnsemblPlantsGene:GSBRNA2T00068321001	GO:GO:0000003	GO:GO:0007275	GO:GO:0008150	GO:GO:0009791
GO:GO:0009908	GO:GO:0009987	GO:GO:0030154	InterPro:Frigida	ncoils:Coil	PANTHER:PTHR31791
PANTHER:PTHR31791:SF13	PFAM:PF07899	ProteinID:CDY67951	ProteinID:CDY67951.1	SEG:seg	UniParc:UPI0004EF0BE6
UniProt:A0A078JQK8	MapMan:35.1	:	:	:	:

Description

BnaAnng25680DFRIGIDA-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078JQK8]

Coordinates

chrLK036693:+:2118..3503

Molecular Weight (calculated)

51453.8 Da

IEP (calculated)

9.087

GRAVY (calculated)

-0.316

Length

461 amino acids

Sequence
(BLAST)

001: MAAGGTNQSK SRAPPTMTAP ESISLAINQI DEKKQKLKQA FDDLQPHCSL LSPSFNLSWS DIDSRFSSLQ SSLSDRFRLL QSDITEPPPL LWPELRTFCD
101: NMDGKGLGKF MVDNSNKRLS IEPELAQAIR SSSSPAALVL DAIQGSYRCS PPSSARALDA RRTFVLLLEA LIEIKPSLTN ELRERARTLA SDWRLNICNK
201: SSEALGFLHL VVVFELVSVF KMEEILDYVF LISKCRQATT LSKMLGLDKT IVAGIVQKLL HTGRLLAAVT FIYEFEMTDR FRPVNVLKTS LYNSREAAKR
301: VCAEGGNSLK AQNEATDKEL SALRLVIRVI KERNLEIEFF EEDLEESVQE LENLRAQRRQ AAKPASPAIP PKRPRVATGN NLTTRTHNQQ PPLLPDPRHG
401: LQVNPFGFVN STVPGVNVPY GNQLAPYGSV PAPAIVARPV YYQQQTGYGL RPQYQPPYYP Q

Best Arabidopsis Sequence Match ( AT1G31814.1 )
(BLAST)

001: MTAAESIAAS INQIDEKKQK LKKAFDDLQA HRSLLSPSFN LSWSEIDSHF SSLQSSLFNR LQSAVTSSNS GNIETPTAVT TETPVLWPEL RKFCEKNDGK
101: GLGNYMIENS RKRLSINEEL PNAIRCSENP APLVLDAIEG SYHCSSPSSS SSARAIDVKR IFVLLLEALI EINANLTNDL RERARTIAYD WKPNIGNKPS
201: EALGFLHLVA AFELGSLFST EEICDYIFLI SKYKQATTIC KKIGLDRNRI GVLVQKFLDT GRLLVAIRFI YENEMVGEFE PVSILKTSLK NSREAAKRVC
301: AEGNYSLKVQ NEATDKELSA LRAVIKVVKE KNIESEFMEE KLEECVKELE DQKAQRKRAT KFNSPANPQQ PQEQKVDNKR PRVANGSSME YNLTIPPLRP
401: QQQPPLLPTP SQILQVNPYG LLSSILPGVA VPYGNPRALF GSVPAPASRP VFYVQQTGYG MPPPQYRPPY YPQ

Arabidopsis Description

FRL2Inactive FRIGIDA-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.