Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12290 | Canola | cytosol | 65.96 | 70.11 |
| Bra023207.1-P | Field mustard | cytosol | 64.9 | 66.59 |
| CDY67951 | Canola | cytosol | 64.69 | 66.38 |
| AT5G16320.1 | Thale cress | nucleus | 54.12 | 54.47 |
| VIT_19s0090g01700.t01 | Wine grape | cytosol | 21.56 | 26.49 |
| KRG98570 | Soybean | cytosol, nucleus, plastid | 30.66 | 26.41 |
| KRH73863 | Soybean | nucleus | 28.75 | 26.2 |
| KRH46301 | Soybean | cytosol | 30.23 | 26.19 |
| AT5G48385.1 | Thale cress | cytosol | 25.58 | 21.68 |
| AT3G22440.1 | Thale cress | cytosol, nucleus, plastid | 21.78 | 19.36 |
| AT4G14900.1 | Thale cress | nucleus | 21.35 | 18.98 |
| AT4G00650.1 | Thale cress | plastid | 10.57 | 15.92 |
| AT5G27230.1 | Thale cress | nucleus | 22.41 | 11.18 |
| PGSC0003DMT400036725 | Potato | nucleus | 2.75 | 4.78 |
Protein Annotations
| MapMan:35.1 | EntrezGene:840070 | ProteinID:AAG50711.1 | ProteinID:AEE31397.1 | EMBL:AK226705 | ArrayExpress:AT1G31814 |
| EnsemblPlantsGene:AT1G31814 | RefSeq:AT1G31814 | TAIR:AT1G31814 | RefSeq:AT1G31814-TAIR-G | EnsemblPlants:AT1G31814.1 | TAIR:AT1G31814.1 |
| EMBL:BT012571 | ncoils:Coil | ProteinID:DAA05286.1 | Symbol:FRL2 | InterPro:Frigida | GO:GO:0000003 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0010228 |
| GO:GO:0030154 | RefSeq:NP_174463.1 | PFAM:PF07899 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31791 |
| PANTHER:PTHR31791:SF13 | UniProt:Q9C6S2 | UniParc:UPI00000A317E | SEG:seg | : | : |
Description
FRL2Inactive FRIGIDA-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S2]
Coordinates
chr1:-:11412392..11414502
Molecular Weight (calculated)
52867.2 Da
IEP (calculated)
8.595
GRAVY (calculated)
-0.411
Length
473 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAAESIAAS INQIDEKKQK LKKAFDDLQA HRSLLSPSFN LSWSEIDSHF SSLQSSLFNR LQSAVTSSNS GNIETPTAVT TETPVLWPEL RKFCEKNDGK
101: GLGNYMIENS RKRLSINEEL PNAIRCSENP APLVLDAIEG SYHCSSPSSS SSARAIDVKR IFVLLLEALI EINANLTNDL RERARTIAYD WKPNIGNKPS
201: EALGFLHLVA AFELGSLFST EEICDYIFLI SKYKQATTIC KKIGLDRNRI GVLVQKFLDT GRLLVAIRFI YENEMVGEFE PVSILKTSLK NSREAAKRVC
301: AEGNYSLKVQ NEATDKELSA LRAVIKVVKE KNIESEFMEE KLEECVKELE DQKAQRKRAT KFNSPANPQQ PQEQKVDNKR PRVANGSSME YNLTIPPLRP
401: QQQPPLLPTP SQILQVNPYG LLSSILPGVA VPYGNPRALF GSVPAPASRP VFYVQQTGYG MPPPQYRPPY YPQ
101: GLGNYMIENS RKRLSINEEL PNAIRCSENP APLVLDAIEG SYHCSSPSSS SSARAIDVKR IFVLLLEALI EINANLTNDL RERARTIAYD WKPNIGNKPS
201: EALGFLHLVA AFELGSLFST EEICDYIFLI SKYKQATTIC KKIGLDRNRI GVLVQKFLDT GRLLVAIRFI YENEMVGEFE PVSILKTSLK NSREAAKRVC
301: AEGNYSLKVQ NEATDKELSA LRAVIKVVKE KNIESEFMEE KLEECVKELE DQKAQRKRAT KFNSPANPQQ PQEQKVDNKR PRVANGSSME YNLTIPPLRP
401: QQQPPLLPTP SQILQVNPYG LLSSILPGVA VPYGNPRALF GSVPAPASRP VFYVQQTGYG MPPPQYRPPY YPQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.