Factsheet for AT4G00650.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05835	Canola	cytosol, nucleus, plastid	55.41	48.47
Bra035723.1-P	Field mustard	plastid	55.73	47.81
VIT_19s0014g00030.t01	Wine grape	cytosol, golgi, nucleus	37.58	40.55
CDX71688	Canola	nucleus	55.41	29.74
Bra029192.1-P	Field mustard	nucleus, plastid	51.91	27.77
CDY38847	Canola	nucleus, plastid	52.55	27.68
CDY32645	Canola	nucleus	50.32	27.1
Solyc03g117910.2.1	Tomato	plastid	29.62	26.96
PGSC0003DMT400084922	Potato	cytosol	26.75	21.21
Solyc03g117930.2.1	Tomato	nucleus	34.08	18.2
KRH54046	Soybean	nucleus	32.8	17.4
KRH63904	Soybean	nucleus	32.8	17.14
Os03t0851400-01	Rice	extracellular	22.61	16.21
EER93089	Sorghum	plastid	23.25	15.8
PGSC0003DMT400037427	Potato	nucleus, plastid	25.8	14.65
Solyc12g042440.1.1	Tomato	nucleus, plastid	25.48	14.63
PGSC0003DMT400080001	Potato	nucleus	31.53	13.83
Solyc04g072200.1.1	Tomato	cytosol	29.94	13.07
TraesCS4A01G329000.1	Wheat	plastid	20.38	12.93
HORVU5Hr1G122680.1	Barley	mitochondrion, peroxisome, plastid	21.66	12.78
PGSC0003DMT400080000	Potato	nucleus	29.3	12.22
TraesCS5B01G543400.1	Wheat	plastid	20.06	12.09
PGSC0003DMT400094724	Potato	nucleus	29.94	12.05
Solyc06g074450.1.1	Tomato	cytosol, mitochondrion, nucleus, peroxisome	20.7	11.36
TraesCS5D01G544800.1	Wheat	mitochondrion	20.06	11.23
AT5G48385.1	Thale cress	cytosol	19.43	10.93
AT5G16320.1	Thale cress	nucleus	15.92	10.64
AT1G31814.1	Thale cress	cytosol	15.92	10.57
AT4G14900.1	Thale cress	nucleus	15.92	9.4
AT3G22440.1	Thale cress	cytosol, nucleus, plastid	15.61	9.21
AT5G27230.1	Thale cress	nucleus	14.33	4.75
Solyc03g117920.1.1	Tomato	nucleus	0.0	0.0
VIT_19s0014g00060.t01	Wine grape	nucleus	0.0	0.0

Protein Annotations

MapMan:35.1	EntrezGene:828044	ProteinID:AAC13626.1	ProteinID:AEE81913.1	EMBL:AK176173	EMBL:AK176225
ArrayExpress:AT4G00650	EnsemblPlantsGene:AT4G00650	RefSeq:AT4G00650	TAIR:AT4G00650	RefSeq:AT4G00650-TAIR-G	EnsemblPlants:AT4G00650.1
TAIR:AT4G00650.1	Unigene:At.16827	ProteinID:CAB80874.1	ncoils:Coil	Symbol:FRI	InterPro:Frigida
GO:GO:0000003	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005654	GO:GO:0007275	GO:GO:0008150	GO:GO:0009791
GO:GO:0009908	GO:GO:0009910	GO:GO:0009987	GO:GO:0010228	GO:GO:0010321	GO:GO:0016607
GO:GO:0030154	GO:GO:0048510	RefSeq:NP_567181.2	PFAM:PF07899	PO:PO:0000037	PO:PO:0000293
PO:PO:0004507	PO:PO:0009009	PANTHER:PTHR31791	PANTHER:PTHR31791:SF3	UniProt:Q67Z93	UniParc:UPI000042BBC9
SEG:seg	:	:	:	:	:

Description

FRIInactive protein FRIGIDA [Source:UniProtKB/Swiss-Prot;Acc:Q67Z93]

Coordinates

chr4:+:268901..271503

Molecular Weight (calculated)

34975.2 Da

IEP (calculated)

8.609

GRAVY (calculated)

-0.342

Length

314 amino acids

Sequence
(BLAST)

001: MSNYPPTVAA QPTTTANPLL QRHQSEQRRR ELPKIVETES TSMDITIGQS KQPQFLKSID ELAAFSVAVE TFKRQFDDLQ KHIESIENAI DSKLESNGVV
101: LAARNNNFHQ PMLSPPRNNV SVETTVTVSQ PSQEIVPETS NKPEGERICE LMCSKGLRKY IYANISDQAK LMEEIPSALK LAKEPAKFVL DCIGKFYLQG
201: RRAFTKESPM SSARQVSLLI LESFLLMPDR GKGKVKIESW IKDEAETAAV AWRKRLMTEG GLAAAEKMDA RGLLLLVACF GVPSNFRSTD LLDLIRMSGS
301: NEIAGALKRS QFQV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.