Factsheet for Zm00001d023870_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002027_P002
Zm00001d003948_P001
Zm00001d011997_P001
Zm00001d017793_P001
Zm00001d018225_P001
Zm00001d018530_P001
Zm00001d025238_P001
Zm00001d025584_P001
Zm00001d025585_P001
Zm00001d037140_P004
Zm00001d044973_P001
Zm00001d050565_P001
Zm00001d051589_P001
Zm00001d052133_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30540.1	Zm00001d017793_P001	AT3G27960.1	21798944
AT2G30540.1	Zm00001d051589_P001	AT3G27960.1	21798944
AT4G15700.1	Zm00001d002027_P002	AT1G22920.1	21798944
AT4G15700.1	Zm00001d018225_P001	AT1G73360.1	21798944
AT4G15700.1	Zm00001d037140_P004	AT1G73360.1	21798944
AT4G15700.1	Zm00001d044973_P001	AT1G73360.1	21798944
AT4G15700.1	Zm00001d052133_P001	AT1G73360.1	21798944
AT4G15700.1	Zm00001d003948_P001	AT2G05230.1	21798944
AT4G15700.1	Zm00001d011997_P001	AT2G05230.1	21798944
AT4G15700.1	Zm00001d025238_P001	AT2G05230.1	21798944
AT4G15700.1	Zm00001d025584_P001	AT2G05230.1	21798944
AT4G15700.1	Zm00001d025585_P001	AT2G05230.1	21798944
AT4G15700.1	Zm00001d050565_P001	AT2G05230.1	21798944
AT4G15700.1	Zm00001d003948_P001	AT2G05250.1	21798944
AT4G15700.1	Zm00001d011997_P001	AT2G05250.1	21798944
AT4G15700.1	Zm00001d025238_P001	AT2G05250.1	21798944
AT4G15700.1	Zm00001d025584_P001	AT2G05250.1	21798944
AT4G15700.1	Zm00001d025585_P001	AT2G05250.1	21798944
AT4G15700.1	Zm00001d050565_P001	AT2G05250.1	21798944
AT4G15700.1	Zm00001d018530_P001	AT5G08330.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023873_P001	Maize	cytosol	88.46	88.46
OQU79243	Sorghum	cytosol	89.42	86.92
EES16097	Sorghum	cytosol	88.46	85.98
HORVU5Hr1G025610.1	Barley	cytosol	83.65	83.65
TraesCS5B01G100700.1	Wheat	cytosol	82.69	82.69
TraesCS5A01G094900.1	Wheat	extracellular	81.73	82.52
TraesCS5A01G094600.1	Wheat	cytosol	81.73	81.73
HORVU5Hr1G025710.1	Barley	cytosol, extracellular	80.77	81.55
TraesCS5B01G101600.1	Wheat	cytosol, extracellular	80.77	81.55
TraesCS5D01G108100.1	Wheat	cytosol, extracellular	80.77	81.55
TraesCS5D01G106900.1	Wheat	cytosol	80.77	80.77
TraesCS5D01G107500.1	Wheat	cytosol, extracellular	79.81	80.58
TraesCS5A01G095500.1	Wheat	cytosol	78.85	79.61
TraesCS5B01G101100.1	Wheat	cytosol, extracellular	78.85	79.61
EES16096	Sorghum	cytosol	74.04	73.33
Zm00001d040837_P001	Maize	cytosol	70.19	70.87
GSMUA_Achr11P...	Banana	cytosol, extracellular	69.23	69.9
GSMUA_Achr5P00370_001	Banana	cytosol	68.27	68.93
Zm00001d027695_P001	Maize	cytosol	68.27	68.27
GSMUA_Achr11P...	Banana	cytosol	67.31	67.96
Zm00001d040836_P001	Maize	cytosol	65.38	66.02
KRH11237	Soybean	cytosol	64.42	65.69
GSMUA_Achr5P00380_001	Banana	extracellular	64.42	65.05
Zm00001d048719_P001	Maize	cytosol	68.27	64.55
GSMUA_Achr1P26720_001	Banana	cytosol	63.46	64.08
KRH21036	Soybean	cytosol	62.5	63.73
Zm00001d023869_P001	Maize	cytosol	63.46	63.46
KRH02215	Soybean	cytosol	61.54	62.75
Zm00001d048720_P001	Maize	cytosol	66.35	62.16
GSMUA_Achr8P33660_001	Banana	cytosol	61.54	62.14
KRH50911	Soybean	cytosol	60.58	61.76
GSMUA_Achr7P03690_001	Banana	cytosol	60.58	61.16
Bra023688.1-P	Field mustard	cytosol	59.62	60.78
Bra002171.1-P	Field mustard	cytosol	58.65	59.8
Bra006467.1-P	Field mustard	cytosol	58.65	59.8
CDX70828	Canola	cytosol	58.65	59.8
CDX88929	Canola	cytosol	58.65	59.8
CDX92597	Canola	cytosol	58.65	59.8
CDY02610	Canola	cytosol	58.65	59.8
CDY13904	Canola	cytosol	58.65	59.8
CDY68328	Canola	cytosol	58.65	59.8
Solyc01g067460.1.1	Tomato	cytosol	58.65	59.8
VIT_05s0020g01750.t01	Wine grape	cytosol	58.65	59.22
AT5G18600.1	Thale cress	cytosol	57.69	58.82
PGSC0003DMT400058374	Potato	cytosol	57.69	58.82
KRG96386	Soybean	cytosol	56.73	58.42
GSMUA_AchrUn_...	Banana	cytosol, extracellular	57.69	58.25
Zm00001d042187_P001	Maize	cytosol	61.54	57.66
KRH68125	Soybean	cytosol	55.77	57.43
Zm00001d023872_P001	Maize	cytosol, mitochondrion	57.69	57.14
VIT_05s0020g01760.t01	Wine grape	cytosol	55.77	56.86
KRH71536	Soybean	extracellular	54.81	56.44
Bra033504.1-P	Field mustard	cytosol	51.92	56.25
AT4G15700.1	Thale cress	cytosol	54.81	55.88
Bra033503.1-P	Field mustard	cytosol	54.81	55.88
CDY66333	Canola	cytosol	54.81	55.88
PGSC0003DMT400058325	Potato	cytosol	54.81	55.88
Solyc01g067440.2.1	Tomato	cytosol	54.81	55.88
KRH31919	Soybean	cytosol, plasma membrane	53.85	55.45
AT4G15680.1	Thale cress	cytosol	53.85	54.9
Bra012773.1-P	Field mustard	cytosol	53.85	54.9
Bra033501.1-P	Field mustard	cytosol	53.85	54.9
CDX90576	Canola	cytosol	53.85	54.9
CDY09747	Canola	cytosol	53.85	54.9
KRG96387	Soybean	cytosol	53.85	54.9
KRH31918	Soybean	cytosol	53.85	54.9
KRH68127	Soybean	cytosol	53.85	54.9
KRH71537	Soybean	cytosol	53.85	54.9
PGSC0003DMT400029525	Potato	cytosol	53.85	54.9
VIT_07s0104g01390.t01	Wine grape	plasma membrane	53.85	54.9
AT4G15660.1	Thale cress	cytosol, extracellular	52.88	53.92
Bra004424.1-P	Field mustard	cytosol	52.88	53.92
CDX80139	Canola	cytosol	52.88	53.92
CDY53024	Canola	cytosol	52.88	53.92
CDY66332	Canola	cytosol	52.88	53.92
KRH11238	Soybean	cytosol	52.88	53.92
KRH50912	Soybean	cytosol	52.88	53.92
PGSC0003DMT400029597	Potato	cytosol	52.88	53.92
PGSC0003DMT400041381	Potato	cytosol, plastid	52.88	53.92
Solyc09g074590.1.1	Tomato	cytosol	52.88	53.92
Solyc09g074600.1.1	Tomato	cytosol	52.88	53.92
Solyc06g008760.1.1	Tomato	cytosol	51.92	53.47
Bra033499.1-P	Field mustard	cytosol	50.0	53.06
AT4G15670.1	Thale cress	cytosol	51.92	52.94
AT4G15690.1	Thale cress	cytosol	51.92	52.94
CDY54296	Canola	cytosol	51.92	52.94
KRH21035	Soybean	cytosol	51.92	52.94
AT1G06830.1	Thale cress	cytosol	50.0	52.53
Bra031540.1-P	Field mustard	cytosol	50.0	52.53
CDY06230	Canola	cytosol	50.0	52.53
CDY09953	Canola	cytosol	50.0	52.53
CDY27469	Canola	cytosol	52.88	52.38
AT2G47880.1	Thale cress	cytosol	50.96	51.96
AT3G21460.1	Thale cress	mitochondrion	50.96	51.96
CDY22746	Canola	cytosol	50.96	51.96
CDY54294	Canola	cytosol	50.96	51.96
PGSC0003DMT400029596	Potato	cytosol	50.96	51.96
Solyc04g011790.1.1	Tomato	cytosol, plastid	50.96	51.96
Solyc06g008750.1.1	Tomato	cytosol	50.96	51.96
PGSC0003DMT400079099	Potato	cytosol	48.08	51.55
CDY10229	Canola	cytosol	49.04	51.52
Bra038076.1-P	Field mustard	cytosol, extracellular	50.0	51.49
CDY09078	Canola	cytosol, extracellular	50.0	51.49
CDY22745	Canola	cytosol, extracellular	50.0	51.49
AT2G47870.1	Thale cress	cytosol	50.96	51.46
Solyc06g054570.1.1	Tomato	cytosol	50.96	51.46
CDY55528	Canola	cytosol	51.92	51.43
Bra001831.1-P	Field mustard	cytosol	50.0	50.98
Bra038075.1-P	Field mustard	cytosol	50.0	50.98
CDX95739	Canola	cytosol	50.0	50.98
CDY32430	Canola	cytosol, plastid	50.0	50.98
CDY32431	Canola	cytosol	50.0	50.98
CDY48891	Canola	cytosol	50.0	50.98
PGSC0003DMT400013649	Potato	cytosol	50.0	50.98
PGSC0003DMT400041380	Potato	cytosol, plastid	50.0	50.98
Solyc09g074580.1.1	Tomato	cytosol	50.0	50.98
CDY69190	Canola	cytosol	50.96	50.96
PGSC0003DMT400041379	Potato	cytosol, plastid	46.15	50.53
PGSC0003DMT400042706	Potato	cytosol	50.0	50.49
Bra021444.1-P	Field mustard	cytosol	50.96	50.48
AT2G30540.1	Thale cress	cytosol	49.04	50.0
AT3G62960.1	Thale cress	cytosol	49.04	50.0
Bra001830.1-P	Field mustard	cytosol, plastid	49.04	50.0
Bra007718.1-P	Field mustard	cytosol	49.04	50.0
CDX76678	Canola	cytosol	49.04	50.0
CDY09079	Canola	cytosol	49.04	50.0
CDY11466	Canola	cytosol	49.04	50.0
CDY48890	Canola	cytosol, plastid	49.04	50.0
PGSC0003DMT400027946	Potato	cytosol, plastid	49.04	50.0
PGSC0003DMT400041382	Potato	cytosol	49.04	50.0
Solyc04g011830.1.1	Tomato	cytosol, plastid	49.04	50.0
Solyc04g011850.1.1	Tomato	cytosol	49.04	50.0
Solyc04g011870.1.1	Tomato	cytosol, plastid	49.04	50.0
VIT_07s0104g01400.t01	Wine grape	cytosol	49.04	50.0
Bra004426.1-P	Field mustard	cytosol	49.04	49.51
CDX80138	Canola	cytosol	49.04	49.51
CDY53023	Canola	cytosol	49.04	49.51
CDY54881	Canola	cytosol	47.12	49.49
Solyc04g011820.1.1	Tomato	cytosol	45.19	49.47
Bra014379.1-P	Field mustard	cytosol	48.08	49.02
Bra021641.1-P	Field mustard	cytosol	48.08	49.02
Bra023883.1-P	Field mustard	cytosol, plastid	48.08	49.02
CDX89162	Canola	cytosol	48.08	49.02
CDY19270	Canola	cytosol, plastid	48.08	49.02
CDY23990	Canola	cytosol	48.08	49.02
CDY29666	Canola	cytosol	48.08	49.02
CDY37292	Canola	cytosol, plastid	48.08	49.02
CDY52638	Canola	cytosol	48.08	49.02
CDY68061	Canola	cytosol	48.08	49.02
KRH31917	Soybean	cytosol	48.08	49.02
PGSC0003DMT400027948	Potato	cytosol, plastid	48.08	49.02
PGSC0003DMT400027950	Potato	cytosol, plastid	48.08	49.02
PGSC0003DMT400027951	Potato	cytosol, plastid	48.08	49.02
Solyc04g011810.1.1	Tomato	cytosol, plastid	48.08	49.02
PGSC0003DMT400027953	Potato	cytosol, plastid	47.12	48.51
PGSC0003DMT400027952	Potato	cytosol	44.23	48.42
Bra007717.1-P	Field mustard	cytosol	35.58	48.05
Bra003517.1-P	Field mustard	cytosol, extracellular	47.12	48.04
Bra018307.1-P	Field mustard	cytosol	47.12	48.04
CDX84825	Canola	cytosol	47.12	48.04
CDY10745	Canola	cytosol	47.12	48.04
KRH68129	Soybean	cytosol	47.12	48.04
KRH71538	Soybean	cytosol	47.12	48.04
PGSC0003DMT400027947	Potato	cytosol, plastid	47.12	48.04
PGSC0003DMT400027949	Potato	cytosol, plastid	47.12	48.04
PGSC0003DMT400027954	Potato	cytosol, plastid	47.12	48.04
Solyc04g011800.1.1	Tomato	cytosol, plastid	47.12	48.04
Solyc04g011840.1.1	Tomato	cytosol	47.12	48.04
Solyc04g011860.1.1	Tomato	cytosol, plastid	47.12	48.04
CDX97824	Canola	cytosol	46.15	47.06
KRG96389	Soybean	cytosol	46.15	47.06
AT3G62950.1	Thale cress	cytosol	46.15	46.6
Bra014380.1-P	Field mustard	cytosol	46.15	46.6
CDX89161	Canola	cytosol	46.15	46.6
VIT_07s0104g01420.t01	Wine grape	cytosol	47.12	46.23
PGSC0003DMT400041378	Potato	cytosol, plastid	45.19	46.08
Solyc04g011780.1.1	Tomato	extracellular	45.19	46.08
CDX76677	Canola	cytosol	45.19	45.63
CDY11464	Canola	cytosol	45.19	45.63
CDY11465	Canola	cytosol	45.19	45.63
Bra014382.1-P	Field mustard	cytosol	44.23	45.1
CDX76675	Canola	cytosol	44.23	45.1
CDX89159	Canola	cytosol	44.23	45.1
CDX93949	Canola	cytosol	44.23	45.1
Solyc05g051730.1.1	Tomato	cytosol	44.23	44.66
Zm00001d016593_P001	Maize	cytosol	55.77	44.62
PGSC0003DMT400077394	Potato	cytosol	44.23	44.23
Solyc05g051720.1.1	Tomato	cytosol	44.23	44.23
AT1G03020.1	Thale cress	cytosol	43.27	44.12
AT3G62930.1	Thale cress	cytosol	43.27	44.12
Bra003515.1-P	Field mustard	cytosol	43.27	44.12
Bra007714.1-P	Field mustard	cytosol	43.27	44.12
Bra032563.1-P	Field mustard	cytosol	43.27	44.12
CDX67910	Canola	cytosol	43.27	44.12
CDY11462	Canola	cytosol	43.27	44.12
CDY18141	Canola	cytosol	43.27	44.12
CDY32493	Canola	cytosol	43.27	44.12
Solyc04g011880.1.1	Tomato	cytosol, plastid	43.27	44.12
Solyc04g053110.1.1	Tomato	cytosol	43.27	44.12
PGSC0003DMT400077393	Potato	cytosol	43.27	43.69
KRH31916	Soybean	cytosol	39.42	43.16
Bra033366.1-P	Field mustard	cytosol	42.31	43.14
CDX89921	Canola	cytosol	42.31	43.14
CDY25124	Canola	cytosol	42.31	43.14
PGSC0003DMT400042707	Potato	cytosol	42.31	43.14
Zm00001d003927_P001	Maize	cytosol	56.73	43.07
PGSC0003DMT400029673	Potato	cytosol	43.27	42.45
Solyc09g074570.1.1	Tomato	cytosol	43.27	42.45
KRH68130	Soybean	cytosol, plastid	40.38	40.0
KRG96390	Soybean	cytosol, plastid	39.42	39.05
KRH31915	Soybean	cytosol, plastid	37.5	37.14
Bra015532.1-P	Field mustard	cytosol	44.23	31.72
CDY71728	Canola	cytosol	40.38	29.58
Zm00001d018802_P001	Maize	cytosol	45.19	29.56
CDX97821	Canola	mitochondrion	35.58	27.82
PGSC0003DMT400013650	Potato	cytosol	40.38	14.24

Protein Annotations

EntrezGene:103643793	MapMan:18.8.2	Gene3D:3.40.30.10	ProteinID:AQK40302.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114
InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:Glutaredoxin_subgr	InterPro:IPR002109	UniProt:K7TYA8	PFAM:PF00462
PRINTS:PR00160	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF98	SUPFAM:SSF52833	TIGRFAMs:TIGR02189
InterPro:Thioredoxin-like_sf	UniParc:UPI0002214CB8	EnsemblPlantsGene:Zm00001d023870	EnsemblPlants:Zm00001d023870_P001	EnsemblPlants:Zm00001d023870_T001	:

Description

Glutaredoxin-C13

Coordinates

chr10:-:25715661..25716072

Molecular Weight (calculated)

11094.9 Da

IEP (calculated)

6.767

GRAVY (calculated)

0.495

Length

104 amino acids

Sequence
(BLAST)

001: MDRVMQLVSE RAVVVFTLSS CCMCHTVTQL MADLSVNALV HELDSDPRGK DMERALLKML GGRAPAVPAV FIGGKLVGGT NNVMSLHLGG ELVPMLMNAG
101: ALWV

Best Arabidopsis Sequence Match ( AT5G18600.1 )
(BLAST)

001: MDMITKMVME RPVVIYSKSS CCMSHTIKTL LCDFGANPAV YELDEISRGR EIEQALLRLG CSPAVPGVFI GGELVGGANE VMSLHLNGSL IPMLKRAGAL
101: WV

Arabidopsis Description

GRXS2Monothiol glutaredoxin-S2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Z8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.