Factsheet for Zm00001d040836_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002027_P002
Zm00001d003948_P001
Zm00001d011997_P001
Zm00001d017793_P001
Zm00001d018225_P001
Zm00001d018530_P001
Zm00001d025238_P001
Zm00001d025584_P001
Zm00001d025585_P001
Zm00001d037140_P004
Zm00001d044973_P001
Zm00001d050565_P001
Zm00001d051589_P001
Zm00001d052133_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30540.1	Zm00001d017793_P001	AT3G27960.1	21798944
AT2G30540.1	Zm00001d051589_P001	AT3G27960.1	21798944
AT4G15700.1	Zm00001d002027_P002	AT1G22920.1	21798944
AT4G15700.1	Zm00001d018225_P001	AT1G73360.1	21798944
AT4G15700.1	Zm00001d037140_P004	AT1G73360.1	21798944
AT4G15700.1	Zm00001d044973_P001	AT1G73360.1	21798944
AT4G15700.1	Zm00001d052133_P001	AT1G73360.1	21798944
AT4G15700.1	Zm00001d003948_P001	AT2G05230.1	21798944
AT4G15700.1	Zm00001d011997_P001	AT2G05230.1	21798944
AT4G15700.1	Zm00001d025238_P001	AT2G05230.1	21798944
AT4G15700.1	Zm00001d025584_P001	AT2G05230.1	21798944
AT4G15700.1	Zm00001d025585_P001	AT2G05230.1	21798944
AT4G15700.1	Zm00001d050565_P001	AT2G05230.1	21798944
AT4G15700.1	Zm00001d003948_P001	AT2G05250.1	21798944
AT4G15700.1	Zm00001d011997_P001	AT2G05250.1	21798944
AT4G15700.1	Zm00001d025238_P001	AT2G05250.1	21798944
AT4G15700.1	Zm00001d025584_P001	AT2G05250.1	21798944
AT4G15700.1	Zm00001d025585_P001	AT2G05250.1	21798944
AT4G15700.1	Zm00001d050565_P001	AT2G05250.1	21798944
AT4G15700.1	Zm00001d018530_P001	AT5G08330.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00745	Sorghum	cytosol	94.17	94.17
Zm00001d040837_P001	Maize	cytosol	87.38	87.38
Os01t0368900-01	Rice	cytosol	86.41	86.41
Zm00001d027695_P001	Maize	cytosol	83.5	82.69
HORVU5Hr1G010960.1	Barley	cytosol	80.58	80.58
TraesCS5A01G044100.1	Wheat	cytosol	80.58	80.58
TraesCS5A01G044700.1	Wheat	cytosol	80.58	80.58
TraesCS5D01G054000.1	Wheat	cytosol	80.58	80.58
TraesCS5A01G044400.1	Wheat	cytosol	79.61	79.61
TraesCS5B01G048300.1	Wheat	cytosol	79.61	79.61
TraesCS5B01G048900.1	Wheat	cytosol	79.61	79.61
TraesCS5D01G054800.1	Wheat	cytosol	79.61	79.61
TraesCS5B01G049000.1	Wheat	cytosol	66.02	79.07
TraesCS5A01G044900.1	Wheat	cytosol	78.64	78.64
TraesCS5B01G048600.1	Wheat	cytosol	78.64	78.64
TraesCS5B01G049100.1	Wheat	cytosol	78.64	78.64
TraesCS5D01G054900.1	Wheat	cytosol	78.64	78.64
TraesCS5B01G048400.1	Wheat	cytosol	77.67	77.67
TraesCS5B01G049200.1	Wheat	cytosol	77.67	77.67
TraesCS5D01G054400.1	Wheat	cytosol	77.67	77.67
TraesCS5A01G045000.1	Wheat	cytosol	76.7	76.7
TraesCS5D01G054200.1	Wheat	cytosol	76.7	76.7
TraesCS5D01G055000.1	Wheat	cytosol	76.7	76.7
HORVU5Hr1G010870.1	Barley	cytosol	75.73	75.73
TraesCS5A01G044800.1	Wheat	cytosol	75.73	75.73
HORVU5Hr1G010950.1	Barley	cytosol	74.76	74.76
TraesCS5D01G055100.1	Wheat	cytosol	74.76	74.76
Zm00001d023869_P001	Maize	cytosol	67.96	67.31
Zm00001d023870_P001	Maize	cytosol, extracellular	66.02	65.38
Zm00001d042187_P001	Maize	cytosol	69.9	64.86
Zm00001d023873_P001	Maize	cytosol	65.05	64.42
Os05t0149950-00	Rice	cytosol, mitochondrion	68.93	62.28
VIT_05s0020g01750.t01	Wine grape	cytosol	62.14	62.14
Zm00001d023872_P001	Maize	cytosol, mitochondrion	63.11	61.9
VIT_07s0104g01390.t01	Wine grape	plasma membrane	60.19	60.78
KRH71536	Soybean	extracellular	59.22	60.4
KRH11237	Soybean	cytosol	59.22	59.8
KRH21036	Soybean	cytosol	59.22	59.8
Zm00001d048720_P001	Maize	cytosol	64.08	59.46
KRG96386	Soybean	cytosol	58.25	59.41
KRH31919	Soybean	cytosol, plasma membrane	57.28	58.42
KRH68125	Soybean	cytosol	57.28	58.42
AT3G21460.1	Thale cress	mitochondrion	57.28	57.84
KRH11238	Soybean	cytosol	57.28	57.84
KRH21035	Soybean	cytosol	57.28	57.84
KRH50912	Soybean	cytosol	57.28	57.84
PGSC0003DMT400058325	Potato	cytosol	57.28	57.84
Solyc01g067440.2.1	Tomato	cytosol	57.28	57.84
Solyc01g067460.1.1	Tomato	cytosol	57.28	57.84
VIT_05s0020g01760.t01	Wine grape	cytosol	57.28	57.84
Bra002171.1-P	Field mustard	cytosol	56.31	56.86
CDX92597	Canola	cytosol	56.31	56.86
CDY13904	Canola	cytosol	56.31	56.86
CDY32430	Canola	cytosol, plastid	56.31	56.86
KRH02215	Soybean	cytosol	56.31	56.86
KRH50911	Soybean	cytosol	56.31	56.86
PGSC0003DMT400058374	Potato	cytosol	56.31	56.86
Bra031540.1-P	Field mustard	cytosol	54.37	56.57
CDY06230	Canola	cytosol	54.37	56.57
CDY09953	Canola	cytosol	54.37	56.57
Zm00001d048719_P001	Maize	cytosol	60.19	56.36
Bra001830.1-P	Field mustard	cytosol, plastid	55.34	55.88
Bra001831.1-P	Field mustard	cytosol	55.34	55.88
Bra006467.1-P	Field mustard	cytosol	55.34	55.88
Bra023688.1-P	Field mustard	cytosol	55.34	55.88
Bra023883.1-P	Field mustard	cytosol, plastid	55.34	55.88
CDX70828	Canola	cytosol	55.34	55.88
CDX88929	Canola	cytosol	55.34	55.88
CDY19270	Canola	cytosol, plastid	55.34	55.88
CDY32431	Canola	cytosol	55.34	55.88
CDY37292	Canola	cytosol, plastid	55.34	55.88
CDY48890	Canola	cytosol, plastid	55.34	55.88
CDY48891	Canola	cytosol	55.34	55.88
AT2G30540.1	Thale cress	cytosol	54.37	54.9
AT4G15700.1	Thale cress	cytosol	54.37	54.9
Bra004424.1-P	Field mustard	cytosol	54.37	54.9
CDX80139	Canola	cytosol	54.37	54.9
CDY02610	Canola	cytosol	54.37	54.9
CDY53024	Canola	cytosol	54.37	54.9
CDY68328	Canola	cytosol	54.37	54.9
AT1G06830.1	Thale cress	cytosol	52.43	54.55
CDY10229	Canola	cytosol	52.43	54.55
CDY54881	Canola	cytosol	52.43	54.55
AT2G47880.1	Thale cress	cytosol	53.4	53.92
Bra018307.1-P	Field mustard	cytosol	53.4	53.92
Bra021641.1-P	Field mustard	cytosol	53.4	53.92
CDX95739	Canola	cytosol	53.4	53.92
CDY10745	Canola	cytosol	53.4	53.92
CDY23990	Canola	cytosol	53.4	53.92
CDY29666	Canola	cytosol	53.4	53.92
CDY52638	Canola	cytosol	53.4	53.92
KRG96387	Soybean	cytosol	53.4	53.92
KRH31918	Soybean	cytosol	53.4	53.92
KRH68127	Soybean	cytosol	53.4	53.92
KRH71537	Soybean	cytosol	53.4	53.92
Bra038076.1-P	Field mustard	cytosol, extracellular	52.43	53.47
CDY09078	Canola	cytosol, extracellular	52.43	53.47
CDY22745	Canola	cytosol, extracellular	52.43	53.47
Solyc06g008760.1.1	Tomato	cytosol	52.43	53.47
CDY27469	Canola	cytosol	54.37	53.33
Bra033504.1-P	Field mustard	cytosol	49.51	53.12
AT3G62960.1	Thale cress	cytosol	52.43	52.94
AT4G15660.1	Thale cress	cytosol, extracellular	52.43	52.94
AT4G15690.1	Thale cress	cytosol	52.43	52.94
AT5G18600.1	Thale cress	cytosol	52.43	52.94
Bra007718.1-P	Field mustard	cytosol	52.43	52.94
Bra012773.1-P	Field mustard	cytosol	52.43	52.94
Bra033503.1-P	Field mustard	cytosol	52.43	52.94
CDX76678	Canola	cytosol	52.43	52.94
CDX84825	Canola	cytosol	52.43	52.94
CDX90576	Canola	cytosol	52.43	52.94
CDX97824	Canola	cytosol	52.43	52.94
CDY09747	Canola	cytosol	52.43	52.94
CDY11466	Canola	cytosol	52.43	52.94
CDY54294	Canola	cytosol	52.43	52.94
CDY66333	Canola	cytosol	52.43	52.94
PGSC0003DMT400029596	Potato	cytosol	52.43	52.94
PGSC0003DMT400079099	Potato	cytosol	49.51	52.58
Bra004426.1-P	Field mustard	cytosol	52.43	52.43
CDX80138	Canola	cytosol	52.43	52.43
Bra033499.1-P	Field mustard	cytosol	49.51	52.04
AT4G15670.1	Thale cress	cytosol	51.46	51.96
AT4G15680.1	Thale cress	cytosol	51.46	51.96
Bra003517.1-P	Field mustard	cytosol, extracellular	51.46	51.96
Bra014379.1-P	Field mustard	cytosol	51.46	51.96
Bra033501.1-P	Field mustard	cytosol	51.46	51.96
CDX89162	Canola	cytosol	51.46	51.96
CDY54296	Canola	cytosol	51.46	51.96
CDY66332	Canola	cytosol	51.46	51.96
CDY68061	Canola	cytosol	51.46	51.96
Solyc09g074580.1.1	Tomato	cytosol	51.46	51.96
AT2G47870.1	Thale cress	cytosol	51.46	51.46
CDY53023	Canola	cytosol	51.46	51.46
Solyc06g054570.1.1	Tomato	cytosol	51.46	51.46
CDY55528	Canola	cytosol	52.43	51.43
CDY22746	Canola	cytosol	50.49	50.98
PGSC0003DMT400029525	Potato	cytosol	50.49	50.98
Solyc09g074590.1.1	Tomato	cytosol	50.49	50.98
CDY69190	Canola	cytosol	51.46	50.96
Bra007717.1-P	Field mustard	cytosol	37.86	50.65
Bra021444.1-P	Field mustard	cytosol	51.46	50.48
Bra038075.1-P	Field mustard	cytosol	49.51	50.0
CDY09079	Canola	cytosol	49.51	50.0
PGSC0003DMT400029597	Potato	cytosol	49.51	50.0
Solyc09g074600.1.1	Tomato	cytosol	49.51	50.0
PGSC0003DMT400041381	Potato	cytosol, plastid	48.54	49.02
Solyc04g011790.1.1	Tomato	cytosol, plastid	48.54	49.02
VIT_07s0104g01400.t01	Wine grape	cytosol	48.54	49.02
AT3G62950.1	Thale cress	cytosol	48.54	48.54
Bra014380.1-P	Field mustard	cytosol	48.54	48.54
CDX89161	Canola	cytosol	48.54	48.54
PGSC0003DMT400041378	Potato	cytosol, plastid	47.57	48.04
PGSC0003DMT400041380	Potato	cytosol, plastid	47.57	48.04
Solyc06g008750.1.1	Tomato	cytosol	47.57	48.04
Zm00001d016593_P001	Maize	cytosol	60.19	47.69
CDX76677	Canola	cytosol	47.57	47.57
CDY11464	Canola	cytosol	47.57	47.57
CDY11465	Canola	cytosol	47.57	47.57
PGSC0003DMT400042706	Potato	cytosol	47.57	47.57
Solyc05g051730.1.1	Tomato	cytosol	47.57	47.57
PGSC0003DMT400041379	Potato	cytosol, plastid	43.69	47.37
PGSC0003DMT400029673	Potato	cytosol	48.54	47.17
Solyc09g074570.1.1	Tomato	cytosol	48.54	47.17
Bra014382.1-P	Field mustard	cytosol	46.6	47.06
CDX89159	Canola	cytosol	46.6	47.06
CDX93949	Canola	cytosol	46.6	47.06
PGSC0003DMT400013649	Potato	cytosol	46.6	47.06
PGSC0003DMT400027946	Potato	cytosol, plastid	46.6	47.06
PGSC0003DMT400041382	Potato	cytosol	46.6	47.06
Solyc04g011830.1.1	Tomato	cytosol, plastid	46.6	47.06
Solyc04g011850.1.1	Tomato	cytosol	46.6	47.06
Solyc04g011870.1.1	Tomato	cytosol, plastid	46.6	47.06
Solyc04g053110.1.1	Tomato	cytosol	46.6	47.06
PGSC0003DMT400027953	Potato	cytosol, plastid	45.63	46.53
Solyc04g011820.1.1	Tomato	cytosol	42.72	46.32
AT1G03020.1	Thale cress	cytosol	45.63	46.08
Bra033366.1-P	Field mustard	cytosol	45.63	46.08
CDX89921	Canola	cytosol	45.63	46.08
CDY18141	Canola	cytosol	45.63	46.08
KRH68129	Soybean	cytosol	45.63	46.08
PGSC0003DMT400027947	Potato	cytosol, plastid	45.63	46.08
PGSC0003DMT400027948	Potato	cytosol, plastid	45.63	46.08
PGSC0003DMT400027950	Potato	cytosol, plastid	45.63	46.08
PGSC0003DMT400027951	Potato	cytosol, plastid	45.63	46.08
PGSC0003DMT400042707	Potato	cytosol	45.63	46.08
Solyc04g011810.1.1	Tomato	cytosol, plastid	45.63	46.08
Solyc04g011880.1.1	Tomato	cytosol, plastid	45.63	46.08
Zm00001d003927_P001	Maize	cytosol	61.16	45.99
PGSC0003DMT400077393	Potato	cytosol	45.63	45.63
PGSC0003DMT400027952	Potato	cytosol	41.75	45.26
PGSC0003DMT400077394	Potato	cytosol	45.63	45.19
Solyc05g051720.1.1	Tomato	cytosol	45.63	45.19
AT3G62930.1	Thale cress	cytosol	44.66	45.1
Bra007714.1-P	Field mustard	cytosol	44.66	45.1
Bra032563.1-P	Field mustard	cytosol	44.66	45.1
CDX76675	Canola	cytosol	44.66	45.1
CDY11462	Canola	cytosol	44.66	45.1
CDY25124	Canola	cytosol	44.66	45.1
CDY32493	Canola	cytosol	44.66	45.1
KRG96389	Soybean	cytosol	44.66	45.1
KRH31917	Soybean	cytosol	44.66	45.1
PGSC0003DMT400027949	Potato	cytosol, plastid	44.66	45.1
PGSC0003DMT400027954	Potato	cytosol, plastid	44.66	45.1
Solyc04g011800.1.1	Tomato	cytosol, plastid	44.66	45.1
Solyc04g011840.1.1	Tomato	cytosol	44.66	45.1
Solyc04g011860.1.1	Tomato	cytosol, plastid	44.66	45.1
Bra003515.1-P	Field mustard	cytosol	43.69	44.12
CDX67910	Canola	cytosol	43.69	44.12
KRH71538	Soybean	cytosol	43.69	44.12
Solyc04g011780.1.1	Tomato	extracellular	42.72	43.14
VIT_07s0104g01420.t01	Wine grape	cytosol	43.69	42.45
KRH68130	Soybean	cytosol, plastid	41.75	40.95
KRG96390	Soybean	cytosol, plastid	40.78	40.0
KRH31915	Soybean	cytosol, plastid	39.81	39.05
KRH31916	Soybean	cytosol	35.92	38.95
Bra015532.1-P	Field mustard	cytosol	48.54	34.48
Zm00001d018802_P001	Maize	cytosol	52.43	33.96
CDY71728	Canola	cytosol	43.69	31.69
CDX97821	Canola	mitochondrion	39.81	30.83
PGSC0003DMT400013650	Potato	cytosol	41.75	14.58

Protein Annotations

EntrezGene:103650186	MapMan:18.8.2	Gene3D:3.40.30.10	UniProt:A0A1D6MTB8	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114
InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:IPR002109	ProteinID:ONM32135.1	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF92	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf	UniParc:UPI00022193D0
EnsemblPlantsGene:Zm00001d040836	EnsemblPlants:Zm00001d040836_P001	EnsemblPlants:Zm00001d040836_T001	:	:	:

Description

Glutaredoxin-C13

Coordinates

chr3:-:69002490..69002801

Molecular Weight (calculated)

11092.7 Da

IEP (calculated)

8.982

GRAVY (calculated)

0.298

Length

103 amino acids

Sequence
(BLAST)

001: MEHVARLASQ RAVVIFSTSS CCMCHTVTQL FRELGVNTMV VELDKDPRGN EMEKGLARLL GRSAGVPAVF IGGRLVGSTD KVMSLHLSGN LVPLLRNAGA
101: LWV

Best Arabidopsis Sequence Match ( AT2G47870.1 )
(BLAST)

001: MERVRDLASE KAAVIFTKSS CCMCHSIKTL FYELGASPAI HELDKDPQGP DMERALFRVF GSNPAVPAVF VGGRYVGSAK DVISFHVDGS LKQMLKASNA
101: IWL

Arabidopsis Description

GRXC12Putative glutaredoxin-C12 [Source:UniProtKB/Swiss-Prot;Acc:O82254]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.