Factsheet for VIT_05s0020g01750.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
vacuole 1
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_03s0038g04360.t01
VIT_04s0008g04950.t01
VIT_12s0057g00710.t01
VIT_17s0053g00780.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G15700.1	VIT_03s0038g04360.t01	AT1G22920.1	21798944
AT4G15700.1	VIT_17s0053g00780.t01	AT1G73360.1	21798944
AT4G15700.1	VIT_12s0057g00710.t01	AT2G05230.1	21798944
AT4G15700.1	VIT_12s0057g00710.t01	AT2G05250.1	21798944
AT4G15700.1	VIT_04s0008g04950.t01	AT4G32570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02215	Soybean	cytosol	79.61	80.39
KRH11237	Soybean	cytosol	79.61	80.39
KRH21036	Soybean	cytosol	79.61	80.39
KRH50911	Soybean	cytosol	78.64	79.41
Solyc01g067460.1.1	Tomato	cytosol	77.67	78.43
PGSC0003DMT400058374	Potato	cytosol	76.7	77.45
Bra002171.1-P	Field mustard	cytosol	75.73	76.47
CDX92597	Canola	cytosol	75.73	76.47
CDY13904	Canola	cytosol	75.73	76.47
AT5G18600.1	Thale cress	cytosol	74.76	75.49
Bra023688.1-P	Field mustard	cytosol	74.76	75.49
Bra033504.1-P	Field mustard	cytosol	69.9	75.0
Bra006467.1-P	Field mustard	cytosol	73.79	74.51
CDX70828	Canola	cytosol	73.79	74.51
CDX88929	Canola	cytosol	73.79	74.51
CDY02610	Canola	cytosol	73.79	74.51
CDY68328	Canola	cytosol	73.79	74.51
AT4G15690.1	Thale cress	cytosol	71.84	72.55
Bra012773.1-P	Field mustard	cytosol	71.84	72.55
CDX90576	Canola	cytosol	71.84	72.55
CDY09747	Canola	cytosol	71.84	72.55
CDY66332	Canola	cytosol	71.84	72.55
Bra033503.1-P	Field mustard	cytosol	70.87	71.57
CDY66333	Canola	cytosol	70.87	71.57
AT4G15670.1	Thale cress	cytosol	69.9	70.59
AT4G15680.1	Thale cress	cytosol	69.9	70.59
AT4G15700.1	Thale cress	cytosol	69.9	70.59
CDY54294	Canola	cytosol	69.9	70.59
CDY54296	Canola	cytosol	69.9	70.59
Bra033499.1-P	Field mustard	cytosol	66.99	70.41
AT4G15660.1	Thale cress	cytosol, extracellular	68.93	69.61
Bra033501.1-P	Field mustard	cytosol	68.93	69.61
CDY22746	Canola	cytosol	68.93	69.61
Bra038075.1-P	Field mustard	cytosol	67.96	68.63
CDY69190	Canola	cytosol	68.93	68.27
Bra038076.1-P	Field mustard	cytosol, extracellular	66.02	67.33
CDY09078	Canola	cytosol, extracellular	66.02	67.33
CDY22745	Canola	cytosol, extracellular	66.02	67.33
CDY09079	Canola	cytosol	66.02	66.67
Os12t0538600-00	Rice	cytosol, extracellular	66.02	66.02
PGSC0003DMT400079099	Potato	cytosol	62.14	65.98
VIT_05s0020g01760.t01	Wine grape	cytosol	65.05	65.69
GSMUA_Achr5P00380_001	Banana	extracellular	64.08	64.08
GSMUA_Achr8P09970_001	Banana	cytosol	64.08	64.08
Solyc06g054570.1.1	Tomato	cytosol	64.08	64.08
GSMUA_Achr11P...	Banana	cytosol	63.11	63.11
Os01t0368900-01	Rice	cytosol	63.11	63.11
Zm00001d040837_P001	Maize	cytosol	63.11	63.11
HORVU5Hr1G025610.1	Barley	cytosol	63.11	62.5
TraesCS5A01G094600.1	Wheat	cytosol	63.11	62.5
TraesCS5B01G100700.1	Wheat	cytosol	63.11	62.5
GSMUA_Achr11P...	Banana	cytosol, extracellular	62.14	62.14
GSMUA_Achr5P00370_001	Banana	cytosol	62.14	62.14
TraesCS5A01G095500.1	Wheat	cytosol	62.14	62.14
TraesCS5B01G101100.1	Wheat	cytosol, extracellular	62.14	62.14
TraesCS5B01G101600.1	Wheat	cytosol, extracellular	62.14	62.14
TraesCS5D01G108100.1	Wheat	cytosol, extracellular	62.14	62.14
Zm00001d040836_P001	Maize	cytosol	62.14	62.14
TraesCS5D01G106900.1	Wheat	cytosol	62.14	61.54
Zm00001d027695_P001	Maize	cytosol	62.14	61.54
EES00746	Sorghum	cytosol	61.16	61.16
HORVU5Hr1G010960.1	Barley	cytosol	61.16	61.16
HORVU5Hr1G025710.1	Barley	cytosol, extracellular	61.16	61.16
TraesCS5A01G044700.1	Wheat	cytosol	61.16	61.16
TraesCS5A01G094900.1	Wheat	extracellular	61.16	61.16
TraesCS5B01G048900.1	Wheat	cytosol	61.16	61.16
TraesCS5D01G054000.1	Wheat	cytosol	61.16	61.16
TraesCS5D01G054800.1	Wheat	cytosol	61.16	61.16
TraesCS5D01G107500.1	Wheat	cytosol, extracellular	61.16	61.16
Zm00001d023873_P001	Maize	cytosol	61.16	60.58
GSMUA_Achr11P...	Banana	cytosol, extracellular	60.19	60.19
GSMUA_Achr1P26720_001	Banana	cytosol	60.19	60.19
TraesCS5A01G044100.1	Wheat	cytosol	60.19	60.19
TraesCS5B01G048300.1	Wheat	cytosol	60.19	60.19
TraesCS5D01G054900.1	Wheat	cytosol	60.19	60.19
VIT_07s0104g01390.t01	Wine grape	plasma membrane	59.22	59.8
EES00745	Sorghum	cytosol	59.22	59.22
GSMUA_Achr8P33660_001	Banana	cytosol	59.22	59.22
HORVU5Hr1G025680.1	Barley	cytosol	59.22	59.22
TraesCS5A01G044400.1	Wheat	cytosol	59.22	59.22
TraesCS5A01G094700.1	Wheat	cytosol	59.22	59.22
TraesCS5B01G048400.1	Wheat	cytosol	59.22	59.22
TraesCS5B01G049100.1	Wheat	cytosol	59.22	59.22
TraesCS5B01G049200.1	Wheat	cytosol	59.22	59.22
TraesCS5B01G100900.1	Wheat	cytosol	59.22	59.22
TraesCS5D01G055100.1	Wheat	cytosol	59.22	59.22
TraesCS5D01G107200.1	Wheat	cytosol	59.22	59.22
EES16092	Sorghum	cytosol	60.19	59.05
TraesCS4D01G147300.1	Wheat	cytosol	59.22	58.65
Zm00001d023869_P001	Maize	cytosol	59.22	58.65
Zm00001d023870_P001	Maize	cytosol, extracellular	59.22	58.65
GSMUA_Achr7P03690_001	Banana	cytosol	58.25	58.25
GSMUA_AchrUn_...	Banana	cytosol, extracellular	58.25	58.25
HORVU5Hr1G010870.1	Barley	cytosol	58.25	58.25
TraesCS5A01G044900.1	Wheat	cytosol	58.25	58.25
TraesCS5A01G045000.1	Wheat	cytosol	58.25	58.25
TraesCS5B01G048600.1	Wheat	cytosol	58.25	58.25
TraesCS5B01G049000.1	Wheat	cytosol	48.54	58.14
Os12t0538700-01	Rice	cytosol	58.25	57.69
TraesCS3A01G462200.1	Wheat	cytosol	58.25	57.69
EES17138	Sorghum	cytosol	59.22	57.55
HORVU5Hr1G010950.1	Barley	cytosol	57.28	57.28
TraesCS5A01G044800.1	Wheat	cytosol	57.28	57.28
TraesCS5A01G094800.1	Wheat	cytosol	57.28	57.28
TraesCS5B01G101000.1	Wheat	cytosol	57.28	57.28
TraesCS5D01G054200.1	Wheat	cytosol	57.28	57.28
TraesCS5D01G054400.1	Wheat	cytosol	57.28	57.28
TraesCS5D01G055000.1	Wheat	cytosol	57.28	57.28
EES16093	Sorghum	cytosol	58.25	57.14
Os11t0656400-00	Rice	cytosol, plastid	60.19	56.88
TraesCS3A01G461900.1	Wheat	cytosol, mitochondrion	57.28	56.73
TraesCS3A01G463000.1	Wheat	cytosol	57.28	56.73
TraesCS3D01G455600.1	Wheat	cytosol, mitochondrion	57.28	56.73
TraesCS3D01G456000.1	Wheat	cytosol, mitochondrion	57.28	56.73
TraesCS3D01G456900.1	Wheat	cytosol	57.28	56.73
TraesCS5A01G094500.1	Wheat	cytosol	57.28	56.73
TraesCS5B01G100600.1	Wheat	cytosol	57.28	56.73
TraesCS5D01G106800.1	Wheat	cytosol	57.28	56.73
TraesCS5D01G107300.1	Wheat	cytosol	56.31	56.31
HORVU5Hr1G033140.1	Barley	cytosol	57.28	56.19
EES02025	Sorghum	cytosol	58.25	56.07
EES16097	Sorghum	cytosol	58.25	56.07
OQU79243	Sorghum	cytosol	58.25	56.07
VIT_07s0104g01400.t01	Wine grape	cytosol	55.34	55.88
TraesCS3B01G504700.1	Wheat	cytosol	56.31	55.77
TraesCS3B01G505300.1	Wheat	cytosol	56.31	55.77
Os11t0655900-01	Rice	extracellular	58.25	55.56
EES08918	Sorghum	cytosol, plastid	56.31	55.24
Os11t0656000-00	Rice	cytosol, plastid	58.25	55.05
Os11t0656700-00	Rice	cytosol, plastid	58.25	55.05
Zm00001d048720_P001	Maize	cytosol	59.22	54.95
TraesCS3B01G506200.1	Wheat	cytosol	55.34	54.81
TraesCS3B01G506400.1	Wheat	cytosol	55.34	54.81
Zm00001d042187_P001	Maize	cytosol	58.25	54.05
TraesCS3A01G463200.1	Wheat	cytosol	54.37	53.85
HORVU3Hr1G099050.2	Barley	cytosol	56.31	53.7
HORVU5Hr1G025690.1	Barley	cytosol	58.25	53.57
TraesCS3D01G457200.1	Wheat	cytosol	53.4	52.88
Zm00001d048719_P001	Maize	cytosol	56.31	52.73
HORVU3Hr1G099090.1	Barley	cytosol	52.43	51.92
TraesCS3B01G506500.1	Wheat	cytosol	52.43	51.92
TraesCS3B01G506000.1	Wheat	mitochondrion	40.78	51.22
Zm00001d023872_P001	Maize	cytosol, mitochondrion	51.46	50.48
EES08919	Sorghum	cytosol	53.4	50.46
VIT_14s0068g01570.t01	Wine grape	cytosol	60.19	50.41
TraesCS3A01G462800.1	Wheat	extracellular	39.81	50.0
VIT_07s0104g01420.t01	Wine grape	cytosol	51.46	50.0
HORVU3Hr1G099150.1	Barley	cytosol, extracellular	31.07	49.23
TraesCS3A01G462900.1	Wheat	cytosol, extracellular	49.51	49.04
Os05t0149950-00	Rice	cytosol, mitochondrion	53.4	48.25
EES16096	Sorghum	cytosol	47.57	46.67
Os01t0936000-00	Rice	cytosol	56.31	46.4
HORVU5Hr1G025560.1	Barley	cytosol	57.28	43.38
VIT_01s0146g00220.t01	Wine grape	cytosol	62.14	41.03
HORVU0Hr1G010190.2	Barley	cytosol	36.89	36.19
VIT_10s0003g03940.t01	Wine grape	mitochondrion	46.6	26.82

Protein Annotations

EntrezGene:100259665	wikigene:100259665	MapMan:18.8.2	Gene3D:3.40.30.10	ProteinID:CBI26100	ProteinID:CBI26100.3
UniProt:D7T6H9	EMBL:FN595749	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin
InterPro:Glutaredoxin_subgr	InterPro:IPR002109	EntrezGene:LOC100259665	wikigene:LOC100259665	PFAM:PF00462	PRINTS:PR00160
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF181	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf
UniParc:UPI00015C7BCD	ArrayExpress:VIT_05s0020g01750	EnsemblPlantsGene:VIT_05s0020g01750	EnsemblPlants:VIT_05s0020g01750.t01	RefSeq:XP_002275384	RefSeq:XP_002275384.1

Description

No Description!

Coordinates

chr5:-:3470098..3470417

Molecular Weight (calculated)

11351.0 Da

IEP (calculated)

8.355

GRAVY (calculated)

0.106

Length

103 amino acids

Sequence
(BLAST)

001: MERAVARLAS ERPVVIFSKS SCCMCHTIKT LFSDFGVNPA VHELDEMPRG REIEQALARL GCNPTVPTVF IGGERVGGTN EIMTLHLNRS LIPMLKRAGA
101: LWV

Best Arabidopsis Sequence Match ( AT5G18600.1 )
(BLAST)

001: MDMITKMVME RPVVIYSKSS CCMSHTIKTL LCDFGANPAV YELDEISRGR EIEQALLRLG CSPAVPGVFI GGELVGGANE VMSLHLNGSL IPMLKRAGAL
101: WV

Arabidopsis Description

GRXS2Monothiol glutaredoxin-S2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Z8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.