Factsheet for Solyc06g054570.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g008230.2.1
Solyc03g098200.2.1
Solyc04g009180.1.1
Solyc05g040050.1.1
Solyc06g065650.2.1
Solyc06g072310.2.1
Solyc06g073150.2.1
Solyc07g047690.1.1
Solyc11g017300.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G15700.1	Solyc06g073150.2.1	AT1G22920.1	21798944
AT4G15700.1	Solyc11g017300.1.1	AT1G22920.1	21798944
AT4G15700.1	Solyc03g098200.2.1	AT1G73360.1	21798944
AT4G15700.1	Solyc06g072310.2.1	AT1G73360.1	21798944
AT4G15700.1	Solyc05g040050.1.1	AT2G05230.1	21798944
AT4G15700.1	Solyc07g047690.1.1	AT2G05230.1	21798944
AT4G15700.1	Solyc05g040050.1.1	AT2G05250.1	21798944
AT4G15700.1	Solyc07g047690.1.1	AT2G05250.1	21798944
AT4G15700.1	Solyc06g065650.2.1	AT4G32570.1	21798944
AT4G15700.1	Solyc01g008230.2.1	AT5G08330.1	21798944
AT4G15700.1	Solyc04g009180.1.1	AT5G08330.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079099	Potato	cytosol	90.29	95.88
Solyc01g067460.1.1	Tomato	cytosol	74.76	75.49
Bra033504.1-P	Field mustard	cytosol	65.05	69.79
CDY66332	Canola	cytosol	68.93	69.61
CDY54296	Canola	cytosol	66.99	67.65
AT5G18600.1	Thale cress	cytosol	66.02	66.67
Bra012773.1-P	Field mustard	cytosol	66.02	66.67
Bra033503.1-P	Field mustard	cytosol	66.02	66.67
CDX90576	Canola	cytosol	66.02	66.67
CDY09747	Canola	cytosol	66.02	66.67
CDY66333	Canola	cytosol	66.02	66.67
AT4G15680.1	Thale cress	cytosol	65.05	65.69
AT4G15700.1	Thale cress	cytosol	65.05	65.69
Bra006467.1-P	Field mustard	cytosol	65.05	65.69
CDX70828	Canola	cytosol	65.05	65.69
CDX88929	Canola	cytosol	65.05	65.69
KRH02215	Soybean	cytosol	65.05	65.69
KRH50911	Soybean	cytosol	65.05	65.69
AT4G15670.1	Thale cress	cytosol	64.08	64.71
AT4G15690.1	Thale cress	cytosol	64.08	64.71
Bra002171.1-P	Field mustard	cytosol	64.08	64.71
Bra033501.1-P	Field mustard	cytosol	64.08	64.71
CDX92597	Canola	cytosol	64.08	64.71
CDY02610	Canola	cytosol	64.08	64.71
CDY13904	Canola	cytosol	64.08	64.71
CDY54294	Canola	cytosol	64.08	64.71
VIT_05s0020g01750.t01	Wine grape	cytosol	64.08	64.08
AT4G15660.1	Thale cress	cytosol, extracellular	63.11	63.73
Bra023688.1-P	Field mustard	cytosol	63.11	63.73
CDY68328	Canola	cytosol	63.11	63.73
Bra038076.1-P	Field mustard	cytosol, extracellular	62.14	63.37
CDY09078	Canola	cytosol, extracellular	62.14	63.37
CDY22745	Canola	cytosol, extracellular	62.14	63.37
CDY69190	Canola	cytosol	63.11	62.5
Bra033499.1-P	Field mustard	cytosol	59.22	62.24
CDY22746	Canola	cytosol	61.16	61.76
KRH11237	Soybean	cytosol	61.16	61.76
Bra038075.1-P	Field mustard	cytosol	60.19	60.78
CDY09079	Canola	cytosol	60.19	60.78
KRH21036	Soybean	cytosol	60.19	60.78
GSMUA_Achr11P...	Banana	cytosol	59.22	59.22
GSMUA_Achr5P00370_001	Banana	cytosol	56.31	56.31
GSMUA_Achr5P00380_001	Banana	extracellular	56.31	56.31
Solyc09g074600.1.1	Tomato	cytosol	55.34	55.88
Solyc09g074590.1.1	Tomato	cytosol	54.37	54.9
GSMUA_Achr11P...	Banana	cytosol, extracellular	54.37	54.37
TraesCS5D01G107300.1	Wheat	cytosol	54.37	54.37
Zm00001d040837_P001	Maize	cytosol	54.37	54.37
Solyc01g067440.2.1	Tomato	cytosol	53.4	53.92
TraesCS5B01G049000.1	Wheat	cytosol	44.66	53.49
GSMUA_Achr1P26720_001	Banana	cytosol	53.4	53.4
GSMUA_Achr8P09970_001	Banana	cytosol	53.4	53.4
Os01t0368900-01	Rice	cytosol	53.4	53.4
Os12t0538600-00	Rice	cytosol, extracellular	53.4	53.4
TraesCS5A01G094700.1	Wheat	cytosol	53.4	53.4
TraesCS5A01G094900.1	Wheat	extracellular	53.4	53.4
TraesCS5B01G100900.1	Wheat	cytosol	53.4	53.4
TraesCS5B01G101000.1	Wheat	cytosol	53.4	53.4
TraesCS5D01G107200.1	Wheat	cytosol	53.4	53.4
HORVU5Hr1G025610.1	Barley	cytosol	53.4	52.88
Os12t0538700-01	Rice	cytosol	53.4	52.88
TraesCS4D01G147300.1	Wheat	cytosol	53.4	52.88
EES00745	Sorghum	cytosol	52.43	52.43
EES00746	Sorghum	cytosol	52.43	52.43
GSMUA_Achr8P33660_001	Banana	cytosol	52.43	52.43
GSMUA_AchrUn_...	Banana	cytosol, extracellular	52.43	52.43
HORVU5Hr1G025680.1	Barley	cytosol	52.43	52.43
TraesCS5A01G044100.1	Wheat	cytosol	52.43	52.43
TraesCS5A01G094800.1	Wheat	cytosol	52.43	52.43
TraesCS5A01G095500.1	Wheat	cytosol	52.43	52.43
TraesCS5B01G048300.1	Wheat	cytosol	52.43	52.43
TraesCS5B01G101100.1	Wheat	cytosol, extracellular	52.43	52.43
TraesCS5B01G101600.1	Wheat	cytosol, extracellular	52.43	52.43
TraesCS5D01G107500.1	Wheat	cytosol, extracellular	52.43	52.43
TraesCS5D01G108100.1	Wheat	cytosol, extracellular	52.43	52.43
TraesCS5A01G094600.1	Wheat	cytosol	52.43	51.92
TraesCS5B01G100700.1	Wheat	cytosol	52.43	51.92
TraesCS5D01G106900.1	Wheat	cytosol	52.43	51.92
Zm00001d023869_P001	Maize	cytosol	52.43	51.92
Zm00001d027695_P001	Maize	cytosol	52.43	51.92
HORVU5Hr1G010960.1	Barley	cytosol	51.46	51.46
HORVU5Hr1G025710.1	Barley	cytosol, extracellular	51.46	51.46
TraesCS5A01G044700.1	Wheat	cytosol	51.46	51.46
TraesCS5B01G048400.1	Wheat	cytosol	51.46	51.46
TraesCS5B01G048900.1	Wheat	cytosol	51.46	51.46
TraesCS5B01G049200.1	Wheat	cytosol	51.46	51.46
TraesCS5D01G054000.1	Wheat	cytosol	51.46	51.46
TraesCS5D01G054800.1	Wheat	cytosol	51.46	51.46
Zm00001d040836_P001	Maize	cytosol	51.46	51.46
Solyc04g053110.1.1	Tomato	cytosol	50.49	50.98
TraesCS5A01G094500.1	Wheat	cytosol	51.46	50.96
TraesCS5B01G100600.1	Wheat	cytosol	51.46	50.96
TraesCS5D01G106800.1	Wheat	cytosol	51.46	50.96
Zm00001d023870_P001	Maize	cytosol, extracellular	51.46	50.96
Zm00001d023873_P001	Maize	cytosol	51.46	50.96
TraesCS5A01G044400.1	Wheat	cytosol	50.49	50.49
TraesCS5B01G049100.1	Wheat	cytosol	50.49	50.49
TraesCS5D01G055100.1	Wheat	cytosol	50.49	50.49
EES16093	Sorghum	cytosol	51.46	50.48
HORVU5Hr1G033140.1	Barley	cytosol	51.46	50.48
EES16092	Sorghum	cytosol	50.49	49.52
TraesCS5A01G044900.1	Wheat	cytosol	49.51	49.51
TraesCS5A01G045000.1	Wheat	cytosol	49.51	49.51
TraesCS5D01G054200.1	Wheat	cytosol	49.51	49.51
TraesCS5D01G054900.1	Wheat	cytosol	49.51	49.51
TraesCS5D01G055000.1	Wheat	cytosol	49.51	49.51
EES17138	Sorghum	cytosol	50.49	49.06
Solyc06g008750.1.1	Tomato	cytosol	48.54	49.02
GSMUA_Achr11P...	Banana	cytosol, extracellular	48.54	48.54
GSMUA_Achr7P03690_001	Banana	cytosol	48.54	48.54
HORVU5Hr1G010950.1	Barley	cytosol	48.54	48.54
Solyc05g051730.1.1	Tomato	cytosol	48.54	48.54
TraesCS5A01G044800.1	Wheat	cytosol	48.54	48.54
TraesCS5B01G048600.1	Wheat	cytosol	48.54	48.54
HORVU5Hr1G025690.1	Barley	cytosol	52.43	48.21
Solyc05g051720.1.1	Tomato	cytosol	48.54	48.08
Solyc04g011790.1.1	Tomato	cytosol, plastid	47.57	48.04
Solyc04g011800.1.1	Tomato	cytosol, plastid	47.57	48.04
Solyc04g011810.1.1	Tomato	cytosol, plastid	47.57	48.04
Solyc04g011830.1.1	Tomato	cytosol, plastid	47.57	48.04
Solyc04g011840.1.1	Tomato	cytosol	47.57	48.04
Solyc09g074580.1.1	Tomato	cytosol	47.57	48.04
TraesCS5D01G054400.1	Wheat	cytosol	47.57	47.57
Solyc04g011820.1.1	Tomato	cytosol	43.69	47.37
Os11t0655900-01	Rice	extracellular	49.51	47.22
Solyc04g011850.1.1	Tomato	cytosol	46.6	47.06
Solyc04g011870.1.1	Tomato	cytosol, plastid	46.6	47.06
Solyc04g011880.1.1	Tomato	cytosol, plastid	46.6	47.06
EES08919	Sorghum	cytosol	49.51	46.79
EES02025	Sorghum	cytosol	48.54	46.73
OQU79243	Sorghum	cytosol	48.54	46.73
HORVU5Hr1G010870.1	Barley	cytosol	46.6	46.6
Solyc06g008760.1.1	Tomato	cytosol	45.63	46.53
TraesCS3A01G463000.1	Wheat	cytosol	46.6	46.15
TraesCS3B01G506200.1	Wheat	cytosol	46.6	46.15
TraesCS3D01G456900.1	Wheat	cytosol	46.6	46.15
Solyc04g011860.1.1	Tomato	cytosol, plastid	45.63	46.08
Zm00001d048720_P001	Maize	cytosol	49.51	45.95
EES16097	Sorghum	cytosol	47.57	45.79
EES08918	Sorghum	cytosol, plastid	46.6	45.71
Zm00001d048719_P001	Maize	cytosol	48.54	45.45
TraesCS3A01G461900.1	Wheat	cytosol, mitochondrion	45.63	45.19
TraesCS3A01G462200.1	Wheat	cytosol	45.63	45.19
TraesCS3A01G463200.1	Wheat	cytosol	45.63	45.19
TraesCS3B01G504700.1	Wheat	cytosol	45.63	45.19
TraesCS3D01G455600.1	Wheat	cytosol, mitochondrion	45.63	45.19
Os11t0656000-00	Rice	cytosol, plastid	47.57	44.95
Os11t0656400-00	Rice	cytosol, plastid	47.57	44.95
HORVU3Hr1G099090.1	Barley	cytosol	44.66	44.23
TraesCS3B01G506400.1	Wheat	cytosol	44.66	44.23
TraesCS3B01G506500.1	Wheat	cytosol	44.66	44.23
TraesCS3D01G456000.1	Wheat	cytosol, mitochondrion	44.66	44.23
TraesCS3D01G457200.1	Wheat	cytosol	44.66	44.23
Solyc04g011780.1.1	Tomato	extracellular	43.69	44.12
Os11t0656700-00	Rice	cytosol, plastid	46.6	44.04
Zm00001d023872_P001	Maize	cytosol, mitochondrion	44.66	43.81
TraesCS3A01G462900.1	Wheat	cytosol, extracellular	43.69	43.27
TraesCS3B01G505300.1	Wheat	cytosol	43.69	43.27
Zm00001d042187_P001	Maize	cytosol	46.6	43.24
Os05t0149950-00	Rice	cytosol, mitochondrion	47.57	42.98
Solyc09g074570.1.1	Tomato	cytosol	43.69	42.45
EES16096	Sorghum	cytosol	40.78	40.0
Solyc01g009910.1.1	Tomato	mitochondrion, plastid	46.6	40.0
HORVU3Hr1G099050.2	Barley	cytosol	41.75	39.81
HORVU5Hr1G025560.1	Barley	cytosol	51.46	38.97
Solyc01g009900.2.1	Tomato	cytosol, plastid	44.66	38.33
TraesCS3A01G462800.1	Wheat	extracellular	30.1	37.8
TraesCS3B01G506000.1	Wheat	mitochondrion	30.1	37.8
Os01t0936000-00	Rice	cytosol	45.63	37.6
Solyc01g009890.1.1	Tomato	cytosol, plastid	45.63	36.15
HORVU3Hr1G099150.1	Barley	cytosol, extracellular	22.33	35.38
Solyc05g015910.1.1	Tomato	cytosol	44.66	35.11
Solyc08g036570.1.1	Tomato	cytosol	42.72	34.92
HORVU0Hr1G010190.2	Barley	cytosol	34.95	34.29

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin
InterPro:Glutaredoxin_subgr	InterPro:IPR002109	UniProt:K4C6E3	PFAM:PF00462	PRINTS:PR00160	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF115	SUPFAM:SSF52833	EnsemblPlantsGene:Solyc06g054570.1	EnsemblPlants:Solyc06g054570.1.1	TIGRFAMs:TIGR02189
InterPro:Thioredoxin-like_sf	UniParc:UPI0002765B86	:	:	:	:

Description

No Description!

Coordinates

chr6:+:37316715..37317026

Molecular Weight (calculated)

11106.7 Da

IEP (calculated)

7.347

GRAVY (calculated)

0.207

Length

103 amino acids

Sequence
(BLAST)

001: MDKLSKMVTE KPVVIFSKTG CCMSHSIKSF FSDLGVNTAV YELDEMLRTG REIETVLSNL GCNPTVPAVF IGGQMVGGES EVMSLHLQGA LKPKLKTAGA
101: LWV

Best Arabidopsis Sequence Match ( AT5G18600.1 )
(BLAST)

001: MDMITKMVME RPVVIYSKSS CCMSHTIKTL LCDFGANPAV YELDEISRGR EIEQALLRLG CSPAVPGVFI GGELVGGANE VMSLHLNGSL IPMLKRAGAL
101: WV

Arabidopsis Description

GRXS2Monothiol glutaredoxin-S2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Z8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.