Factsheet for TraesCS3B01G506200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G284200.2
TraesCS2A01G504600.1
TraesCS2B01G301100.1
TraesCS2D01G283100.2
TraesCS2D01G505300.1
TraesCS3A01G435100.1
TraesCS3A01G536400.1
TraesCS3B01G470100.1
TraesCS3B01G607500.1
TraesCS3D01G541800.1
TraesCS4B01G319100.1
TraesCS4D01G315600.1
TraesCS5A01G493100.1
TraesCS6A01G274500.1
TraesCS6A01G324500.1
TraesCS6A01G412800.1
TraesCS6B01G302000.1
TraesCS6B01G354900.3
TraesCS6B01G462100.1
TraesCS6D01G254800.1
TraesCS6D01G304300.1
TraesCS6D01G397000.1
TraesCS7A01G167900.1
TraesCS7B01G072700.1
TraesCS7D01G168700.1
TraesCSU01G150000.1
TraesCSU01G244000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30540.1	TraesCS6A01G274500.1	AT3G27960.1	21798944
AT2G30540.1	TraesCS6B01G302000.1	AT3G27960.1	21798944
AT2G30540.1	TraesCS6D01G254800.1	AT3G27960.1	21798944
AT4G15700.1	TraesCS2A01G504600.1	AT1G22920.1	21798944
AT4G15700.1	TraesCS2D01G505300.1	AT1G22920.1	21798944
AT4G15700.1	TraesCS6A01G324500.1	AT1G73360.1	21798944
AT4G15700.1	TraesCS6B01G354900.3	AT1G73360.1	21798944
AT4G15700.1	TraesCS6D01G304300.1	AT1G73360.1	21798944
AT4G15700.1	TraesCS7A01G167900.1	AT1G73360.1	21798944
AT4G15700.1	TraesCS7B01G072700.1	AT1G73360.1	21798944
AT4G15700.1	TraesCS7D01G168700.1	AT1G73360.1	21798944
AT4G15700.1	TraesCSU01G150000.1	AT1G73360.1	21798944
AT4G15700.1	TraesCSU01G244000.1	AT1G73360.1	21798944
AT4G15700.1	TraesCS2A01G284200.2	AT2G05230.1	21798944
AT4G15700.1	TraesCS2B01G301100.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS2D01G283100.2	AT2G05230.1	21798944
AT4G15700.1	TraesCS3A01G435100.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS3A01G536400.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS3B01G470100.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS3B01G607500.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS3D01G541800.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS4B01G319100.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS4D01G315600.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS5A01G493100.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS2A01G284200.2	AT2G05250.1	21798944
AT4G15700.1	TraesCS2B01G301100.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS2D01G283100.2	AT2G05250.1	21798944
AT4G15700.1	TraesCS3A01G435100.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS3A01G536400.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS3B01G470100.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS3B01G607500.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS3D01G541800.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS4B01G319100.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS4D01G315600.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS5A01G493100.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS6A01G412800.1	AT5G08330.1	21798944
AT4G15700.1	TraesCS6B01G462100.1	AT5G08330.1	21798944
AT4G15700.1	TraesCS6D01G397000.1	AT5G08330.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G463000.1	Wheat	cytosol	95.19	95.19
TraesCS3D01G456900.1	Wheat	cytosol	95.19	95.19
TraesCS3B01G504700.1	Wheat	cytosol	86.54	86.54
TraesCS3B01G506500.1	Wheat	cytosol	86.54	86.54
TraesCS3B01G505300.1	Wheat	cytosol	85.58	85.58
TraesCS3B01G506400.1	Wheat	cytosol	84.62	84.62
TraesCS3B01G506000.1	Wheat	mitochondrion	63.46	80.49
EES02025	Sorghum	cytosol	79.81	77.57
Zm00001d042187_P001	Maize	cytosol	77.88	72.97
GSMUA_Achr8P09970_001	Banana	cytosol	70.19	70.87
Os01t0936000-00	Rice	cytosol	81.73	68.0
TraesCS5B01G049100.1	Wheat	cytosol	67.31	67.96
GSMUA_Achr11P...	Banana	cytosol, extracellular	66.35	66.99
TraesCS5B01G048300.1	Wheat	cytosol	66.35	66.99
TraesCS5B01G048400.1	Wheat	cytosol	65.38	66.02
TraesCS5B01G048900.1	Wheat	cytosol	65.38	66.02
TraesCS5B01G049200.1	Wheat	cytosol	65.38	66.02
TraesCS5B01G049000.1	Wheat	cytosol	53.85	65.12
TraesCS5B01G048600.1	Wheat	cytosol	64.42	65.05
TraesCS5B01G101000.1	Wheat	cytosol	64.42	65.05
TraesCS5B01G101600.1	Wheat	cytosol, extracellular	63.46	64.08
TraesCS5B01G101100.1	Wheat	cytosol, extracellular	62.5	63.11
TraesCS5B01G100600.1	Wheat	cytosol	62.5	62.5
TraesCS5B01G100700.1	Wheat	cytosol	61.54	61.54
TraesCS5B01G100900.1	Wheat	cytosol	59.62	60.19
AT3G21460.1	Thale cress	mitochondrion	56.73	57.84
CDY32430	Canola	cytosol, plastid	56.73	57.84
KRH11237	Soybean	cytosol	56.73	57.84
Solyc01g067440.2.1	Tomato	cytosol	56.73	57.84
VIT_05s0020g01760.t01	Wine grape	cytosol	56.73	57.84
Bra001830.1-P	Field mustard	cytosol, plastid	55.77	56.86
Bra001831.1-P	Field mustard	cytosol	55.77	56.86
CDY32431	Canola	cytosol	55.77	56.86
CDY48890	Canola	cytosol, plastid	55.77	56.86
CDY48891	Canola	cytosol	55.77	56.86
KRH11238	Soybean	cytosol	55.77	56.86
KRH21035	Soybean	cytosol	55.77	56.86
PGSC0003DMT400058325	Potato	cytosol	55.77	56.86
KRH02215	Soybean	cytosol	54.81	55.88
KRH21036	Soybean	cytosol	54.81	55.88
KRH50911	Soybean	cytosol	54.81	55.88
KRH50912	Soybean	cytosol	54.81	55.88
VIT_05s0020g01750.t01	Wine grape	cytosol	54.81	55.34
Bra023883.1-P	Field mustard	cytosol, plastid	53.85	54.9
CDY19270	Canola	cytosol, plastid	53.85	54.9
CDY37292	Canola	cytosol, plastid	53.85	54.9
KRH31919	Soybean	cytosol, plasma membrane	52.88	54.46
KRH71536	Soybean	extracellular	52.88	54.46
CDY68328	Canola	cytosol	52.88	53.92
VIT_07s0104g01390.t01	Wine grape	plasma membrane	52.88	53.92
KRH68125	Soybean	cytosol	51.92	53.47
Bra007717.1-P	Field mustard	cytosol	39.42	53.25
AT4G15700.1	Thale cress	cytosol	51.92	52.94
Bra006467.1-P	Field mustard	cytosol	51.92	52.94
Bra023688.1-P	Field mustard	cytosol	51.92	52.94
CDX70828	Canola	cytosol	51.92	52.94
CDX88929	Canola	cytosol	51.92	52.94
CDY02610	Canola	cytosol	51.92	52.94
KRG96386	Soybean	cytosol	50.96	52.48
AT2G47870.1	Thale cress	cytosol	51.92	52.43
Bra004426.1-P	Field mustard	cytosol	51.92	52.43
CDX80138	Canola	cytosol	51.92	52.43
Bra002171.1-P	Field mustard	cytosol	50.96	51.96
CDX92597	Canola	cytosol	50.96	51.96
PGSC0003DMT400029525	Potato	cytosol	50.96	51.96
Solyc01g067460.1.1	Tomato	cytosol	50.96	51.96
Solyc09g074590.1.1	Tomato	cytosol	50.96	51.96
Solyc06g008760.1.1	Tomato	cytosol	50.0	51.49
CDY53023	Canola	cytosol	50.96	51.46
Bra033504.1-P	Field mustard	cytosol	47.12	51.04
AT4G15660.1	Thale cress	cytosol, extracellular	50.0	50.98
Bra033503.1-P	Field mustard	cytosol	50.0	50.98
CDY13904	Canola	cytosol	50.0	50.98
CDY66333	Canola	cytosol	50.0	50.98
KRG96387	Soybean	cytosol	50.0	50.98
KRH68127	Soybean	cytosol	50.0	50.98
PGSC0003DMT400029597	Potato	cytosol	50.0	50.98
PGSC0003DMT400058374	Potato	cytosol	50.0	50.98
Solyc09g074600.1.1	Tomato	cytosol	50.0	50.98
AT4G15670.1	Thale cress	cytosol	49.04	50.0
AT4G15680.1	Thale cress	cytosol	49.04	50.0
AT4G15690.1	Thale cress	cytosol	49.04	50.0
Bra012773.1-P	Field mustard	cytosol	49.04	50.0
CDX90576	Canola	cytosol	49.04	50.0
CDY09079	Canola	cytosol	49.04	50.0
CDY09747	Canola	cytosol	49.04	50.0
CDY22746	Canola	cytosol	49.04	50.0
CDY54294	Canola	cytosol	49.04	50.0
CDY54296	Canola	cytosol	49.04	50.0
CDY66332	Canola	cytosol	49.04	50.0
PGSC0003DMT400029596	Potato	cytosol	49.04	50.0
AT3G62950.1	Thale cress	cytosol	49.04	49.51
Bra014380.1-P	Field mustard	cytosol	49.04	49.51
CDX89161	Canola	cytosol	49.04	49.51
Bra031540.1-P	Field mustard	cytosol	47.12	49.49
CDY06230	Canola	cytosol	47.12	49.49
CDY09953	Canola	cytosol	47.12	49.49
AT2G30540.1	Thale cress	cytosol	48.08	49.02
AT5G18600.1	Thale cress	cytosol	48.08	49.02
Bra033501.1-P	Field mustard	cytosol	48.08	49.02
Bra038075.1-P	Field mustard	cytosol	48.08	49.02
KRH31918	Soybean	cytosol	48.08	49.02
KRH71537	Soybean	cytosol	48.08	49.02
Solyc09g074580.1.1	Tomato	cytosol	48.08	49.02
CDX76677	Canola	cytosol	48.08	48.54
CDY11464	Canola	cytosol	48.08	48.54
CDY11465	Canola	cytosol	48.08	48.54
Bra038076.1-P	Field mustard	cytosol, extracellular	47.12	48.51
CDY09078	Canola	cytosol, extracellular	47.12	48.51
CDY22745	Canola	cytosol, extracellular	47.12	48.51
CDY10229	Canola	cytosol	46.15	48.48
CDY54881	Canola	cytosol	46.15	48.48
Bra004424.1-P	Field mustard	cytosol	47.12	48.04
Bra018307.1-P	Field mustard	cytosol	47.12	48.04
Bra021641.1-P	Field mustard	cytosol	47.12	48.04
CDX80139	Canola	cytosol	47.12	48.04
CDY10745	Canola	cytosol	47.12	48.04
CDY23990	Canola	cytosol	47.12	48.04
CDY29666	Canola	cytosol	47.12	48.04
CDY52638	Canola	cytosol	47.12	48.04
CDY53024	Canola	cytosol	47.12	48.04
VIT_07s0104g01400.t01	Wine grape	cytosol	47.12	48.04
AT1G06830.1	Thale cress	cytosol	45.19	47.47
PGSC0003DMT400079099	Potato	cytosol	44.23	47.42
CDX84825	Canola	cytosol	46.15	47.06
CDX95739	Canola	cytosol	46.15	47.06
CDX97824	Canola	cytosol	46.15	47.06
Solyc06g008750.1.1	Tomato	cytosol	46.15	47.06
TraesCS2B01G302700.1	Wheat	cytosol, extracellular	60.58	47.01
Bra033499.1-P	Field mustard	cytosol	44.23	46.94
Solyc06g054570.1.1	Tomato	cytosol	46.15	46.6
CDY69190	Canola	cytosol	46.15	46.15
AT2G47880.1	Thale cress	cytosol	45.19	46.08
Bra014382.1-P	Field mustard	cytosol	45.19	46.08
CDX89159	Canola	cytosol	45.19	46.08
CDX93949	Canola	cytosol	45.19	46.08
PGSC0003DMT400013649	Potato	cytosol	45.19	46.08
PGSC0003DMT400041381	Potato	cytosol, plastid	45.19	46.08
CDY55528	Canola	cytosol	46.15	45.71
AT3G62960.1	Thale cress	cytosol	44.23	45.1
Bra007714.1-P	Field mustard	cytosol	44.23	45.1
Bra007718.1-P	Field mustard	cytosol	44.23	45.1
CDX76675	Canola	cytosol	44.23	45.1
CDX76678	Canola	cytosol	44.23	45.1
CDY11462	Canola	cytosol	44.23	45.1
CDY11466	Canola	cytosol	44.23	45.1
Bra021444.1-P	Field mustard	cytosol	45.19	44.76
CDY27469	Canola	cytosol	45.19	44.76
PGSC0003DMT400042706	Potato	cytosol	44.23	44.66
AT3G62930.1	Thale cress	cytosol	43.27	44.12
Bra003515.1-P	Field mustard	cytosol	43.27	44.12
Bra003517.1-P	Field mustard	cytosol, extracellular	43.27	44.12
Bra014379.1-P	Field mustard	cytosol	43.27	44.12
CDX67910	Canola	cytosol	43.27	44.12
CDX89162	Canola	cytosol	43.27	44.12
CDY25124	Canola	cytosol	43.27	44.12
CDY68061	Canola	cytosol	43.27	44.12
PGSC0003DMT400041378	Potato	cytosol, plastid	43.27	44.12
Solyc04g011790.1.1	Tomato	cytosol, plastid	43.27	44.12
AT1G03020.1	Thale cress	cytosol	42.31	43.14
KRH68129	Soybean	cytosol	42.31	43.14
PGSC0003DMT400041380	Potato	cytosol, plastid	42.31	43.14
Solyc04g011870.1.1	Tomato	cytosol, plastid	42.31	43.14
KRH68130	Soybean	cytosol, plastid	43.27	42.86
Bra032563.1-P	Field mustard	cytosol	41.35	42.16
Bra033366.1-P	Field mustard	cytosol	41.35	42.16
CDX89921	Canola	cytosol	41.35	42.16
CDY18141	Canola	cytosol	41.35	42.16
CDY32493	Canola	cytosol	41.35	42.16
KRG96389	Soybean	cytosol	41.35	42.16
KRH31917	Soybean	cytosol	41.35	42.16
PGSC0003DMT400027946	Potato	cytosol, plastid	41.35	42.16
PGSC0003DMT400041382	Potato	cytosol	41.35	42.16
Solyc04g011830.1.1	Tomato	cytosol, plastid	41.35	42.16
Solyc04g011840.1.1	Tomato	cytosol	41.35	42.16
Solyc04g011850.1.1	Tomato	cytosol	41.35	42.16
PGSC0003DMT400041379	Potato	cytosol, plastid	38.46	42.11
KRG96390	Soybean	cytosol, plastid	42.31	41.9
PGSC0003DMT400027953	Potato	cytosol, plastid	40.38	41.58
PGSC0003DMT400029673	Potato	cytosol	42.31	41.51
KRH71538	Soybean	cytosol	40.38	41.18
PGSC0003DMT400027948	Potato	cytosol, plastid	40.38	41.18
PGSC0003DMT400027950	Potato	cytosol, plastid	40.38	41.18
PGSC0003DMT400027951	Potato	cytosol, plastid	40.38	41.18
Solyc04g011810.1.1	Tomato	cytosol, plastid	40.38	41.18
Solyc04g011860.1.1	Tomato	cytosol, plastid	40.38	41.18
Solyc04g011880.1.1	Tomato	cytosol, plastid	40.38	41.18
Solyc04g053110.1.1	Tomato	cytosol	40.38	41.18
KRH31916	Soybean	cytosol	37.5	41.05
PGSC0003DMT400027952	Potato	cytosol	37.5	41.05
Solyc04g011820.1.1	Tomato	cytosol	37.5	41.05
Solyc09g074570.1.1	Tomato	cytosol	41.35	40.57
VIT_07s0104g01420.t01	Wine grape	cytosol	41.35	40.57
PGSC0003DMT400027947	Potato	cytosol, plastid	39.42	40.2
PGSC0003DMT400027949	Potato	cytosol, plastid	39.42	40.2
PGSC0003DMT400027954	Potato	cytosol, plastid	39.42	40.2
PGSC0003DMT400042707	Potato	cytosol	39.42	40.2
Solyc04g011800.1.1	Tomato	cytosol, plastid	39.42	40.2
TraesCS2B01G271600.1	Wheat	cytosol	52.88	40.15
Solyc05g051730.1.1	Tomato	cytosol	39.42	39.81
Solyc04g011780.1.1	Tomato	extracellular	38.46	39.22
KRH31915	Soybean	cytosol, plastid	39.42	39.05
PGSC0003DMT400077393	Potato	cytosol	38.46	38.84
PGSC0003DMT400077394	Potato	cytosol	38.46	38.46
Solyc05g051720.1.1	Tomato	cytosol	38.46	38.46
Bra015532.1-P	Field mustard	cytosol	42.31	30.34
CDX97821	Canola	mitochondrion	35.58	27.82
CDY71728	Canola	cytosol	37.5	27.46
PGSC0003DMT400013650	Potato	cytosol	41.35	14.58

Protein Annotations

EnsemblPlants:TraesCS3B01G506200.1	EnsemblPlantsGene:TraesCS3B01G506200	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	InterPro:GlrX-like_pln_2
InterPro:Glutaredoxin	InterPro:IPR002109	InterPro:Thioredoxin-like_sf	PANTHER:PTHR10168	PANTHER:PTHR10168:SF62	PFAM:PF00462
PFscan:PS51354	SUPFAM:SSF52833	TIGR:cd03419	TIGRFAMs:TIGR02189	MapMan:18.8.2	:

Description

No Description!

Coordinates

chr3B:+:749864112..749864426

Molecular Weight (calculated)

11280.1 Da

IEP (calculated)

9.606

GRAVY (calculated)

0.336

Length

104 amino acids

Sequence
(BLAST)

001: MAETVTKLVS QRAVVIFGAS NCCMCHAVKT LFTELGVSWV VHELDKDPRG KDVERALASM VRRSPPVPAV FIGGRLVGPT DKVMTLHLSG QLVPLLRQAG
101: ALWL

Best Arabidopsis Sequence Match ( AT2G47870.1 )
(BLAST)

001: MERVRDLASE KAAVIFTKSS CCMCHSIKTL FYELGASPAI HELDKDPQGP DMERALFRVF GSNPAVPAVF VGGRYVGSAK DVISFHVDGS LKQMLKASNA
101: IWL

Arabidopsis Description

GRXC12Putative glutaredoxin-C12 [Source:UniProtKB/Swiss-Prot;Acc:O82254]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.