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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • mitochondrion 2
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX68863
CDX75256
CDX83601
CDX92171
CDX93081
CDX95810
CDY05010
CDY14061
CDY15046
CDY23332
CDY30950
CDY51673

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G14070.1 CDX93081 AT2G05230.1 21798944
AT5G14070.1 CDY15046 AT2G05230.1 21798944
AT5G14070.1 CDX93081 AT2G05250.1 21798944
AT5G14070.1 CDY15046 AT2G05250.1 21798944
AT5G14070.1 CDX92171 AT3G17860.1 21798944
AT5G14070.1 CDX95810 AT3G17860.1 21798944
AT5G14070.1 CDX68863 AT4G32570.1 21798944
AT5G14070.1 CDX75256 AT4G32570.1 21798944
AT5G14070.1 CDX83601 AT4G32570.1 21798944
AT5G14070.1 CDY23332 AT4G32570.1 21798944
AT5G14070.1 CDY30950 AT4G32570.1 21798944
AT5G14070.1 CDY51673 AT4G32570.1 21798944
AT5G14070.1 CDY05010 AT5G06960.1 21798944
AT5G14070.1 CDY14061 AT5G06960.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008782.1-P Field mustard cytosol 73.27 55.22
CDX70540 Canola cytosol 69.31 51.09
CDX78558 Canola cytosol 69.31 51.09
AT5G14070.1 Thale cress cytosol 69.31 50.0
CDX85614 Canola cytosol 67.33 49.63
CDX91084 Canola cytosol 66.34 48.91
CDX91918 Canola cytosol 62.38 47.01
CDX74327 Canola cytosol 63.37 46.72
CDY32430 Canola cytosol, plastid 41.58 41.18
CDY48890 Canola cytosol, plastid 40.59 40.2
CDY32431 Canola cytosol 39.6 39.22
CDY48891 Canola cytosol 39.6 39.22
PGSC0003DMT400013435 Potato cytosol, plastid 46.53 39.17
Solyc05g015910.1.1 Tomato cytosol 50.49 38.93
EES05136 Sorghum cytosol 49.51 38.76
Solyc01g009910.1.1 Tomato mitochondrion, plastid 45.54 38.33
Solyc01g009900.2.1 Tomato cytosol, plastid 45.54 38.33
PGSC0003DMT400013427 Potato mitochondrion, plastid 45.54 38.33
KRG94592 Soybean plastid 49.51 37.88
GSMUA_AchrUn_... Banana cytosol 48.51 37.69
KRH06898 Soybean plastid 49.51 37.31
CDY68328 Canola cytosol 37.62 37.25
CDX92597 Canola cytosol 37.62 37.25
CDY37292 Canola cytosol, plastid 37.62 37.25
CDX70828 Canola cytosol 37.62 37.25
CDY19270 Canola cytosol, plastid 37.62 37.25
CDY13904 Canola cytosol 37.62 37.25
Os04t0393500-01 Rice cytosol 49.51 37.04
Zm00001d016593_P001 Maize cytosol 47.52 36.92
KRH70543 Soybean cytosol 48.51 36.84
GSMUA_Achr3P18710_001 Banana cytosol 48.51 36.84
TraesCS2D01G284300.1 Wheat cytosol, extracellular 48.51 36.57
TraesCS2B01G302700.1 Wheat cytosol, extracellular 48.51 36.57
TraesCS2A01G285600.1 Wheat cytosol, extracellular 48.51 36.57
HORVU0Hr1G003840.1 Barley extracellular 48.51 36.57
PGSC0003DMT400006076 Potato plastid 48.51 36.57
EES10652 Sorghum cytosol 49.51 36.5
GSMUA_Achr10P... Banana cytosol 48.51 36.3
Os02t0512400-01 Rice cytosol 48.51 36.3
CDY66333 Canola cytosol 36.63 36.27
CDX88929 Canola cytosol 36.63 36.27
CDY02610 Canola cytosol 36.63 36.27
GSMUA_Achr6P23860_001 Banana plastid 48.51 36.03
PGSC0003DMT400013430 Potato cytosol 45.54 35.38
Solyc01g009890.1.1 Tomato cytosol, plastid 45.54 35.38
CDY58422 Canola cytosol 58.42 35.12
Zm00001d003927_P001 Maize cytosol 47.52 35.04
KRH01571 Soybean cytosol 48.51 34.51
CDX95739 Canola cytosol 34.65 34.31
CDY22746 Canola cytosol 33.66 33.33
CDX80139 Canola cytosol 33.66 33.33
CDX90576 Canola cytosol 33.66 33.33
CDY09747 Canola cytosol 33.66 33.33
CDY53024 Canola cytosol 33.66 33.33
CDY66332 Canola cytosol 33.66 33.33
CDY54296 Canola cytosol 33.66 33.33
CDY54881 Canola cytosol 32.67 33.33
VIT_01s0146g00220.t01 Wine grape cytosol 50.49 32.69
CDY22745 Canola cytosol, extracellular 32.67 32.67
CDY09078 Canola cytosol, extracellular 32.67 32.67
CDY55528 Canola cytosol 33.66 32.38
CDY09079 Canola cytosol 32.67 32.35
CDY23990 Canola cytosol 32.67 32.35
CDY54294 Canola cytosol 32.67 32.35
CDY06230 Canola cytosol 31.68 32.32
CDY09953 Canola cytosol 31.68 32.32
CDY53023 Canola cytosol 32.67 32.04
CDX89161 Canola cytosol 32.67 32.04
CDY27469 Canola cytosol 32.67 31.43
CDY52638 Canola cytosol 31.68 31.37
CDX84825 Canola cytosol 31.68 31.37
CDY29666 Canola cytosol 31.68 31.37
CDX97824 Canola cytosol 31.68 31.37
CDY10745 Canola cytosol 31.68 31.37
CDY10229 Canola cytosol 30.69 31.31
CDY11464 Canola cytosol 31.68 31.07
CDX76677 Canola cytosol 31.68 31.07
CDY11465 Canola cytosol 31.68 31.07
CDX80138 Canola cytosol 31.68 31.07
CDX76678 Canola cytosol 30.69 30.39
CDY69190 Canola cytosol 30.69 29.81
CDY68061 Canola cytosol 29.7 29.41
CDX89162 Canola cytosol 29.7 29.41
CDY11466 Canola cytosol 29.7 29.41
CDX67910 Canola cytosol 26.73 26.47
CDY25124 Canola cytosol 26.73 26.47
CDY18141 Canola cytosol 25.74 25.49
CDX89159 Canola cytosol 25.74 25.49
CDX76675 Canola cytosol 25.74 25.49
CDY11462 Canola cytosol 25.74 25.49
CDX93949 Canola cytosol 25.74 25.49
CDX89921 Canola cytosol 25.74 25.49
CDY32493 Canola cytosol 24.75 24.51
CDX97821 Canola mitochondrion 30.69 23.31
CDY71728 Canola cytosol 21.78 15.49
Protein Annotations
MapMan:18.8.2Gene3D:3.40.30.10GO:A0A078C0D9EnsemblPlants:CDX69609ProteinID:CDX69609ProteinID:CDX69609.1
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623GO:GO:0008150GO:GO:0009055
GO:GO:0009987GO:GO:0015035GO:GO:0019725GO:GO:0045454EnsemblPlantsGene:GSBRNA2T00135623001InterPro:Glutaredoxin
InterPro:IPR002109PFscan:PS51354PANTHER:PTHR10168PANTHER:PTHR10168:SF128SUPFAM:SSF52833TMHMM:TMhelix
InterPro:Thioredoxin-like_sfUniParc:UPI0004EF05ED::::
Description
BnaA10g19580D
Coordinates
chrLK031790:-:990554..991519
Molecular Weight (calculated)
10965.7 Da
IEP (calculated)
9.198
GRAVY (calculated)
0.401
Length
101 amino acids
Sequence
(BLAST)
001: MENHRPYLKH STSSQCYYLL NAHIMLAASK FLFGALDLLP YGVDIHRALL RLLGCSSPTS PGALPVVFIG GKMLGSMERV MASHINGSLV PLLKDAGALW
101: L
Best Arabidopsis Sequence Match ( AT5G14070.1 )
(BLAST)
001: MQYKTETRGS LSYNNNSKVM NNMNVFPSET LAKIESMAAE NAVVIFSVST CCMCHAIKRL FRGMGVSPAV HELDLLPYGV EIHRALLRLL GCSSGGATSP
101: GALPVVFIGG KMVGAMERVM ASHINGSLVP LLKDAGALWL
Arabidopsis Description
GRXC8Glutaredoxin-C8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LF89]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.