CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41342	Soybean	nucleus	88.55	73.87
VIT_02s0025g01700.t01	Wine grape	nucleus	63.86	56.68
Os01t0706000-01	Rice	nucleus	55.42	50.0
GSMUA_Achr8P05370_001	Banana	nucleus	50.0	48.82
KXG33215	Sorghum	nucleus	51.2	46.45
TraesCS3B01G284700.1	Wheat	nucleus	51.2	44.5
TraesCS3D01G253600.1	Wheat	nucleus	51.2	44.5
TraesCS3A01G256000.1	Wheat	nucleus	50.6	44.21
TraesCS3B01G288800.1	Wheat	nucleus	50.6	44.21
Zm00001d011680_P002	Maize	cytosol	50.0	39.71
KRH53937	Soybean	nucleus	18.67	29.52
HORVU3Hr1G066410.6	Barley	cytosol	28.92	25.4
KRH64003	Soybean	nucleus	16.27	23.48
Zm00001d043705_P005	Maize	nucleus	48.8	20.2
KRH68921	Soybean	nucleus	48.19	14.34
KRG97195	Soybean	endoplasmic reticulum, golgi, vacuole	44.58	13.5

Protein Annotations

Gene3D:2.30.31.10	MapMan:35.1	UniProt:A0A0R0JZJ8	EMBL:ACUP02003347	ncoils:Coil	InterPro:DEK_C
EnsemblPlantsGene:GLYMA_05G218100	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003713	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR009044	InterPro:KELP	EnsemblPlants:KRH60062	ProteinID:KRH60062	ProteinID:KRH60062.1	InterPro:PC4
PFAM:PF02229	PFAM:PF08766	PIRSF:PIRSF038156	PANTHER:PTHR13215	PANTHER:PTHR13215:SF6	SUPFAM:SSF109715
SUPFAM:SSF54447	UniParc:UPI00023C4F91	SEG:seg	InterPro:ssDNA-bd_transcriptional_reg	:	:

Description

hypothetical protein

Coordinates

chr5:+:39807065..39809297

Molecular Weight (calculated)

19263.4 Da

IEP (calculated)

4.553

GRAVY (calculated)

-1.164

Length

166 amino acids

Sequence
(BLAST)

001: MDDAETKGRI EETVRRVLQE SDMDEVTESK IRKQASEQLG LDLSQPHFKA FVKQVVKAFL QEEEQRQQQQ QQDEDDDDEE EEQGGVSKGK EYDDEGDLII
101: CRLSDKRRVT IQDFRGKTLV SIREYYKKDG KELPTSKGIS LTEEQWSTFK KNVPAIEKAI KKMESS

Best Arabidopsis Sequence Match ( AT4G10920.2 )
(BLAST)

001: MEKETKEKIE KTVIEILSES DMKEITEFKV RKLASEKLAI DLSEKSHKAF VRSVVEKFLD EERAREYENS QVNKEEEDGD KDCGKGNKEF DDDGDLIICR
101: LSDKRRVTIQ EFKGKSLVSI REYYKKDGKE LPTSKGISLT DEQWSTFKKN MPAIENAVKK MESRV

Arabidopsis Description

KELPUncharacterized protein At4g10920 [Source:UniProtKB/TrEMBL;Acc:Q0WP62]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.