Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH60062 | Soybean | nucleus | 73.87 | 88.55 |
| VIT_02s0025g01700.t01 | Wine grape | nucleus | 54.27 | 57.75 |
| Os01t0706000-01 | Rice | nucleus | 47.24 | 51.09 |
| GSMUA_Achr8P05370_001 | Banana | nucleus | 41.71 | 48.82 |
| KXG33215 | Sorghum | nucleus | 44.72 | 48.63 |
| TraesCS3B01G284700.1 | Wheat | nucleus | 44.22 | 46.07 |
| TraesCS3D01G253600.1 | Wheat | nucleus | 44.22 | 46.07 |
| TraesCS3A01G256000.1 | Wheat | nucleus | 43.72 | 45.79 |
| TraesCS3B01G288800.1 | Wheat | nucleus | 43.72 | 45.79 |
| Zm00001d011680_P002 | Maize | cytosol | 43.72 | 41.63 |
| KRH53937 | Soybean | nucleus | 15.58 | 29.52 |
| HORVU3Hr1G066410.6 | Barley | cytosol | 24.62 | 25.93 |
| KRH64003 | Soybean | nucleus | 13.57 | 23.48 |
| Zm00001d043705_P005 | Maize | nucleus | 42.71 | 21.2 |
| KRH68921 | Soybean | nucleus | 40.2 | 14.34 |
| KRG97195 | Soybean | endoplasmic reticulum, golgi, vacuole | 37.69 | 13.69 |
Protein Annotations
| Gene3D:2.30.31.10 | MapMan:35.1 | UniProt:A0A0R0IFS8 | EMBL:ACUP02004760 | ncoils:Coil | InterPro:DEK_C |
| EnsemblPlantsGene:GLYMA_08G024200 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003713 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005667 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0060261 | InterPro:IPR009044 | InterPro:KELP | EnsemblPlants:KRH41342 | ProteinID:KRH41342 | ProteinID:KRH41342.1 |
| InterPro:PC4 | PFAM:PF02229 | PFAM:PF08766 | PIRSF:PIRSF038156 | PANTHER:PTHR13215 | PANTHER:PTHR13215:SF6 |
| SUPFAM:SSF109715 | SUPFAM:SSF54447 | UniParc:UPI0006ED8449 | SEG:seg | InterPro:ssDNA-bd_transcriptional_reg | : |
Description
hypothetical protein
Coordinates
chr8:+:1930383..1934625
Molecular Weight (calculated)
22981.1 Da
IEP (calculated)
4.734
GRAVY (calculated)
-0.932
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIYEKNLDP PSDIPVSGSL RNFLDCFCVR EISATKMDDT ETKGRIEETV RRILQESDMD EVTESKIRKQ ASEHLGLDLS QPYFKAFVKQ VVKAFLQEEE
101: QRQKQQQQDE DEEEELGGGS KGKEYDDEGD LIICRLSDKR RVTIQDFRGK TLVSIREYYK KDGKELPTSK GISLTEEQWS AFKKNVPAIE KAIKKMESS
101: QRQKQQQQDE DEEEELGGGS KGKEYDDEGD LIICRLSDKR RVTIQDFRGK TLVSIREYYK KDGKELPTSK GISLTEEQWS AFKKNVPAIE KAIKKMESS
001: MEKETKEKIE KTVIEILSES DMKEITEFKV RKLASEKLAI DLSEKSHKAF VRSVVEKFLD EERAREYENS QVNKEEEDGD KDCGKGNKEF DDDGDLIICR
101: LSDKRRVTIQ EFKGKSLVSI REYYKKDGKE LPTSKGISLT DEQWSTFKKN MPAIENAVKK MESRV
101: LSDKRRVTIQ EFKGKSLVSI REYYKKDGKE LPTSKGISLT DEQWSTFKKN MPAIENAVKK MESRV
Arabidopsis Description
KELPUncharacterized protein At4g10920 [Source:UniProtKB/TrEMBL;Acc:Q0WP62]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.