CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053861_P005	Maize	plastid	96.14	96.28
HORVU6Hr1G025120.1	Barley	cytosol	14.56	90.74
TraesCS6B01G159200.1	Wheat	plastid	88.41	88.81
TraesCS6D01G120800.1	Wheat	plastid	88.26	88.66
TraesCS6A01G130900.1	Wheat	plastid	87.82	88.21
GSMUA_Achr3P07220_001	Banana	cytosol, nucleus, plastid	73.4	87.59
HORVU6Hr1G025110.1	Barley	plastid	66.72	84.08
VIT_07s0031g03050.t01	Wine grape	plastid	81.72	80.88
KRH63332	Soybean	cytosol	31.8	78.97
PGSC0003DMT400070154	Potato	plastid	79.64	78.59
Solyc04g015450.2.1	Tomato	nucleus	79.49	78.56
CDY44781	Canola	plastid	78.6	78.37
KRH53996	Soybean	plasma membrane	79.94	78.31
AT5G08650.1	Thale cress	plastid	78.9	77.97
CDY40739	Canola	plastid	78.6	77.34
Bra028651.1-P	Field mustard	plastid	78.45	77.19
KRH63330	Soybean	cytosol, plasma membrane	29.57	73.98
KRH63943	Soybean	plastid	79.35	71.2
EER89181	Sorghum	mitochondrion	46.81	47.37
EES01486	Sorghum	mitochondrion	23.33	23.33
KXG30054	Sorghum	mitochondrion, plastid	23.03	23.1
OQU84528	Sorghum	cytosol	8.02	19.93
OQU75622	Sorghum	cytosol	9.51	18.88
EER90530	Sorghum	mitochondrion, plastid	19.17	17.02
EES12566	Sorghum	plastid	18.13	15.74
KXG37185	Sorghum	cytosol	18.87	15.07
KXG37183	Sorghum	cytosol	18.87	15.07
EES03541	Sorghum	mitochondrion	18.87	15.07
EES01455	Sorghum	cytosol	18.72	14.95
KXG37923	Sorghum	cytosol	18.13	11.67
EER90029	Sorghum	cytosol	16.79	11.36
KXG30393	Sorghum	nucleus	8.47	6.46

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.30.70.2570	Gene3D:3.30.70.3380	Gene3D:3.30.70.870	Gene3D:3.40.50.300	MapMan:35.1
UniProt:A0A194YMQ2	ncoils:Coil	InterPro:EF-4	InterPro:EFG_III/V	InterPro:EFG_V-like	InterPro:EFTu-like_2
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0045727	InterPro:GUFP	InterPro:G_TR_CS	InterPro:IPR000795	InterPro:IPR038363
ProteinID:KXG29508.1	InterPro:LepA_CTD	InterPro:LepA_C_sf	InterPro:LepA_IV	HAMAP:MF_00071	HAMAP:MF_03138
EnsemblPlants:OQU84405	ProteinID:OQU84405	ProteinID:OQU84405.1	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF00679
PFAM:PF03144	PFAM:PF06421	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR43512
PANTHER:PTHR43512:SF1	SMART:SM00838	EnsemblPlantsGene:SORBI_3004G046500	SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54980
InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR01393	InterPro:Transl_B-barrel_sf	UniParc:UPI0003C64E93
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:3781282..3790469

Molecular Weight (calculated)

74382.3 Da

IEP (calculated)

6.774

GRAVY (calculated)

-0.180

Length

673 amino acids

Sequence
(BLAST)

001: MATGATASRL AVLAPRPLAP APGRRRHAPA PGCGPSRPRG LHAAPRGRVL CLAAPAPAAP STTDAGQDRL RKVPISNIRN FCIIAHIDHG KSTLADKLLE
101: LTGTVQKREM KEQFLDNMDL ERERGITIKL QAARMRYVMN NEPYCLNLID TPGHVDFSYE VSRSLAACEG ALLVVDASQG VEAQTLANVY LALENNLEII
201: PVLNKIDLPG AEPDRVAQEI EEIIGLDCSD AIRCSAKEGI GITEILDALV TKIPPPKDTA KDPLRALIFD SYYDPYRGVI VYFRVIDGSI KKGDKICFMA
301: NGKEYVADEI GVLSPNQMQV DELYAGEVGY LSASIRSVAD ARVGDTITHY SKKADHALPG YSQATPMVFC GLFPIDADQF EELREALEKL QLNDAALKFE
401: PESSSAMGFG FRCGFLGLLH MEIVQERLER EYNLNLIITA PSVVYRVNCV DGETVECSNP SLLPEPGKRR SIEEPYVKIE MLTPKDYIGS IMDLAQDRRG
501: EFKEMNFITE SRAKLIYELP LAEMVGDFFD QLKSRSKGYA SMEYSLIGYR ESQLVKLDIQ INGDPVEALS TIVHRDKAYA VGRALTQKLK ELIPRQMFKV
601: PIQACIGTKV IASEALSAIR KDVLSKCYGG DITRKKKLLK KQAEGKKRMK AIGRVDVPQE AFMAVLKLEK EVL

Best Arabidopsis Sequence Match ( AT5G08650.1 )
(BLAST)

001: MAMASAMDLS SPPTFFLSGT STSSPSLRRL SSISVSGFRR HSNRKLQILC QATAGTEPQS GLSVSGSKLA ARSGQDRLLK VPISNIRNFS IIAHIDHGKS
101: TLADKLLQVT GTVQNRDMKE QFLDNMDLER ERGITIKLQA ARMRYVYEDT PFCLNLIDTP GHVDFSYEVS RSLAACEGAL LVVDASQGVE AQTLANVYLA
201: LENNLEIIPV LNKIDLPGAE PEKVLREIEE VIGLDCSKAI FCSAKEGIGI TEILDAIVQR IPAPLDTAGK PLRALIFDSY YDPYRGVIVY FRVIDGKVKK
301: GDRIFFMASG KDYFADEVGV LSPNQIQVDE LYAGEVGYIA ASVRSVADAR VGDTITHYSR KAESSLPGYE EATPMVFCGL FPVDADQFPD LRDALEKLQL
401: NDAALKFEPE TSSAMGFGFR CGFLGLLHME IVQERLEREY NLNLITTAPS VVYRVNSVNG DTTLCSNPSR LPDPGQRKSV EEPYVKIELL TPKDYIGALM
501: ELAQERRGEF KEMKYIAENR ASILYELPLA EMVGDFFDQL KSRTKGYASM EYSVIGYRES DLIKLDILIN AEMVEPLSTI VHRDKAYSVG RALTQKLKEL
601: IPRQMFKVPI QACIGSKVIA SEALSAIRKD VLAKCYGGDI SRKKKLLKKQ AAGKKRMKAI GRVDVPQEAF MAVLKLEREV L

Arabidopsis Description

Translation factor GUF1 homolog, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A178USI8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.