CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002822_P001	Maize	plastid	96.39	97.14
Zm00001d025948_P001	Maize	plastid	95.61	96.48
Os04t0538100-01	Rice	plasma membrane	47.35	95.08
TraesCS2A01G387000.1	Wheat	mitochondrion, plastid	91.23	92.06
TraesCS2D01G383800.1	Wheat	mitochondrion, plastid	91.1	91.93
TraesCS2B01G404600.1	Wheat	plastid	91.1	91.93
Os04t0538166-00	Rice	cytosol, mitochondrion, peroxisome	16.65	91.49
HORVU2Hr1G092180.1	Barley	plastid	88.13	89.52
VIT_00s1286g00020.t01	Wine grape	cytosol, mitochondrion	23.35	85.78
VIT_00s0323g00080.t01	Wine grape	plastid	81.55	81.55
GSMUA_Achr5P13570_001	Banana	mitochondrion	76.0	81.35
KRH57341	Soybean	nucleus, plastid	81.68	81.15
CDY31838	Canola	plastid	80.26	80.26
CDY46917	Canola	plastid	80.26	80.26
Bra027021.1-P	Field mustard	plastid	80.13	80.13
KRH04069	Soybean	nucleus, plastid	81.29	80.05
AT1G62750.1	Thale cress	plastid	79.87	79.05
PGSC0003DMT400012076	Potato	cytosol, plastid	80.26	79.03
Solyc08g079180.2.1	Tomato	plastid	80.13	78.91
EER90530	Sorghum	mitochondrion, plastid	41.16	42.08
OQU75622	Sorghum	cytosol	9.42	21.53
OQU84528	Sorghum	cytosol	7.35	21.03
KXG37185	Sorghum	cytosol	22.71	20.88
EES01455	Sorghum	cytosol	22.71	20.88
KXG37183	Sorghum	cytosol	22.71	20.88
EES03541	Sorghum	mitochondrion	22.32	20.52
EES01486	Sorghum	mitochondrion	16.26	18.72
EER89181	Sorghum	mitochondrion	15.61	18.2
OQU84405	Sorghum	plastid	15.74	18.13
KXG30054	Sorghum	mitochondrion, plastid	15.48	17.88
EER90029	Sorghum	cytosol	20.9	16.28
KXG37923	Sorghum	cytosol	20.0	14.83
KXG30393	Sorghum	nucleus	13.68	12.02

Protein Annotations

MapMan:17.7.4.3	Gene3D:2.40.30.10	Gene3D:3.30.230.10	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300
EntrezGene:8083327	UniProt:C5YCZ2	EnsemblPlants:EES12566	ProteinID:EES12566	ProteinID:EES12566.1	InterPro:EFG_III
InterPro:EFG_III/V	InterPro:EFG_V	InterPro:EFG_V-like	InterPro:EFTu-like_2	InterPro:EF_G_plantC	GO:GO:0000166
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003746	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005524	GO:GO:0005525	GO:GO:0005575	GO:GO:0005576	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006412	GO:GO:0006414	GO:GO:0007275
GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009570	GO:GO:0009658	GO:GO:0009791	GO:GO:0009845	GO:GO:0009941	GO:GO:0009987
GO:GO:0016043	GO:GO:0016787	GO:GO:0019538	GO:GO:0048046	InterPro:G_TR_CS	InterPro:IPR000795
InterPro:IPR014721	HAMAP:MF_00054_B	HAMAP:MF_03063	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF00679
PFAM:PF03144	PFAM:PF03764	PFAM:PF14492	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722
PANTHER:PTHR43261	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	SMART:SM00838	SMART:SM00889	EnsemblPlantsGene:SORBI_3006G161500
SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF54980	unigene:Sbi.1293	InterPro:Small_GTP-bd_dom
InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR00484	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EFG/EF2	InterPro:Transl_elong_EFG/EF2_IV
UniParc:UPI0001A8744F	RefSeq:XP_002448238.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:51932254..51936442

Molecular Weight (calculated)

85169.2 Da

IEP (calculated)

5.278

GRAVY (calculated)

-0.211

Length

775 amino acids

Sequence
(BLAST)

001: MAAEVPVRAP AAAARSARSR PAAAAAVVSA SSASRLLLGY RPFHAPRFAA GRAAVAGPVA GLRPRSRRPR LSVVAMAGSD RQVPLHDYRN IGIMAHIDAG
101: KTTTTERILY YTGRNYKIGE VHEGTATMDW MEQEQERGIT ITSAATTAFW NKHRINIIDT PGHVDFTLEV ERALRVLDGA ICLFDSVAGV EPQSETVWRQ
201: ADKYGVPRIC FVNKMDRLGA NFFRTRDMIV ANLGAKPLVI QLPIGSEDNF QGVIDLVRMK AIVWTGEELG AKFEYKDIPD DLQELAQDYR VQMLETIIEL
301: DDEVMENYLE GTEPDEETVK KLIRKGTISA SFVPVLCGSA FKNKGVQPLL DAVVDYLPSP LDLPSMKGTD PEDPEIIFER QPSDDEPFSG LAFKIMTDPF
401: VGSLTFVRIY SGKLVAGSYV LNANKDKKER IGRLLEMHAN SKEDIPVAVT GDIVALAGLK DTITGETLCD PDKPVVLERM EFPDPVIKVA IEPKTKADAD
501: KMANGLIKLA QEDPSFHFSR DEETNQTVIE GMGELHLDII VDRLKREFKV EANVGAPQVN YRESISKVAE IQYVHKKQSG GSGQFADIIV RFEPLEAGSG
601: YEFKSEIKGG AVPKEYVPGV MKGLEESLPN GVLAGYPVVD FRAVLVDGSY HDVDSSVLAF QIAARGAFRE GMRKAGPRLL EPIMRVEVIT PEEHLGDVIG
701: DLNSRRGQVN SFGDKPGGLK VVDAFVPLAE MFQYVSTLRG MTKGRASYTM QLAKFDVVPQ HIQNQLSTKT EEATA

Best Arabidopsis Sequence Match ( AT1G62750.1 )
(BLAST)

001: MAADALRISS SSSGSLVCNL NGSQRRPVLL PLSHRATFLG LPPRASSSSI SSSIPQFLGT SRIGLGSSKL SQKKKQFSVF AAAEAEAKRA VPLKDYRNIG
101: IMAHIDAGKT TTTERILYYT GRNYKIGEVH EGTATMDWME QEQERGITIT SAATTTFWDK HRINIIDTPG HVDFTLEVER ALRVLDGAIC LFDSVAGVEP
201: QSETVWRQAD KYGVPRICFV NKMDRLGANF FRTRDMIVTN LGAKPLVLQI PIGAEDVFKG VVDLVRMKAI VWSGEELGAK FSYEDIPEDL EDLAQEYRAA
301: MMELIVDLDD EVMENYLEGV EPDEATVKRL VRKGTITGKF VPILCGSAFK NKGVQPLLDA VVDYLPSPVE VPPMNGTDPE NPEITIIRKP DDDEPFAGLA
401: FKIMSDPFVG SLTFVRVYSG KISAGSYVLN ANKGKKERIG RLLEMHANSR EDVKVALTGD IIALAGLKDT ITGETLSDPE NPVVLERMDF PDPVIKVAIE
501: PKTKADIDKM ATGLIKLAQE DPSFHFSRDE EMNQTVIEGM GELHLEIIVD RLKREFKVEA NVGAPQVNYR ESISKIAEVK YTHKKQSGGQ GQFADITVRF
601: EPLEAGSGYE FKSEIKGGAV PREYIPGVMK GLEECMSTGV LAGFPVVDVR ACLVDGSYHD VDSSVLAFQL AARGAFREGM RKAGPRMLEP IMRVEVVTPE
701: EHLGDVIGDL NSRRGQINSF GDKPGGLKVV DSLVPLAEMF QYVSTLRGMT KGRASYTMQL AKFDVVPQHI QNQLSSKDQE VAA

Arabidopsis Description

CPEFGElongation factor G, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SI75]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.