CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37183	Sorghum	cytosol	99.76	99.76
KXG37185	Sorghum	cytosol	99.76	99.76
OQU75622	Sorghum	cytosol	39.98	99.41
GSMUA_Achr10P...	Banana	cytosol	86.71	94.81
Solyc08g062920.2.1	Tomato	nucleus, plastid	91.93	93.6
KRH43759	Soybean	nucleus	93.59	93.59
Solyc08g062910.2.1	Tomato	cytosol, extracellular, nucleus, unclear	85.41	93.51
KRH13696	Soybean	nucleus	93.48	93.48
CDY49975	Canola	cytosol	43.89	92.73
VIT_19s0027g00760.t01	Wine grape	cytosol	93.71	92.61
CDX90241	Canola	cytosol, extracellular	86.71	92.41
Bra010782.1-P	Field mustard	cytosol	92.05	92.05
AT1G56070.2	Thale cress	cytosol	91.81	91.81
CDY70516	Canola	cytosol	55.4	91.75
GSMUA_Achr4P01020_001	Banana	cytosol	94.31	91.48
CDY05533	Canola	cytosol	70.82	91.42
Os01t0742200-01	Rice	cytosol, nucleus	89.32	91.16
Bra010781.1-P	Field mustard	cytosol	59.67	91.12
CDY32072	Canola	cytosol	69.87	91.04
CDY49974	Canola	nucleus	9.13	90.59
CDY70526	Canola	nucleus	9.02	89.41
AT3G12915.2	Thale cress	cytosol	83.27	89.09
CDY24982	Canola	endoplasmic reticulum, vacuole	87.78	88.31
Bra017279.1-P	Field mustard	cytosol	91.93	88.27
CDY40423	Canola	cytosol	82.33	88.18
Bra020542.1-P	Field mustard	cytosol	91.81	81.9
EES03541	Sorghum	mitochondrion	77.82	77.82
KRH43761	Soybean	cytosol, nucleus, plastid	18.27	77.0
GSMUA_Achr6P22520_001	Banana	endoplasmic reticulum, extracellular, vacuole	39.98	76.94
KRH13693	Soybean	mitochondrion	75.44	76.9
KRH13692	Soybean	cytosol, mitochondrion	60.74	71.61
CDY54261	Canola	nucleus	18.03	66.09
OQU84528	Sorghum	cytosol	10.68	33.21
EER90029	Sorghum	cytosol	38.91	32.96
KXG37923	Sorghum	cytosol	34.52	27.85
KXG30393	Sorghum	nucleus	25.39	24.26
EES12566	Sorghum	plastid	20.88	22.71
EER90530	Sorghum	mitochondrion, plastid	18.98	21.11
EES01486	Sorghum	mitochondrion	16.73	20.95
EER89181	Sorghum	mitochondrion	15.07	19.1
KXG30054	Sorghum	mitochondrion, plastid	14.95	18.78
OQU84405	Sorghum	plastid	14.95	18.72

Protein Annotations

MapMan:17.5.2.1	Gene3D:2.40.30.10	Gene3D:3.30.230.10	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300
Gene3D:3.90.1430.10	EntrezGene:8075554	UniProt:C5XJZ3	EnsemblPlants:EES01455	ProteinID:EES01455	ProteinID:EES01455.1
InterPro:EFG_III/V	InterPro:EFG_V-like	InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_TR_CS	InterPro:IPR000795
InterPro:IPR014721	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF00679	PFAM:PF03144	PFAM:PF03764
PFAM:PF14492	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR42908	PANTHER:PTHR42908:SF11
InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	SMART:SM00838	SMART:SM00889	EnsemblPlantsGene:SORBI_3003G291500	SUPFAM:SSF50447
SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF54980	unigene:Sbi.14135	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom
TIGRFAMs:TIGR00231	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EFG/EF2_IV	UniParc:UPI0001A84931	RefSeq:XP_002456335.1	:

Description

hypothetical protein

Coordinates

chr3:+:62409172..62412403

Molecular Weight (calculated)

93895.8 Da

IEP (calculated)

6.156

GRAVY (calculated)

-0.210

Length

843 amino acids

Sequence
(BLAST)

001: MVKFTAEELR GIMDKKNNIR NMSVIAHVDH GKSTLTDSLV AAAGIIAQEV AGDVRMTDTR ADEAERGITI KSTGISLYYE MTDESLKNYK GERDGNQYLI
101: NLIDSPGHVD FSSEVTAALR ITDGALVVVD CIEGVCVQTE TVLRQALGER IRPVLTVNKM DRCFLELQVE GEEAYQTFSR VIENANVIMA TYEDKLLGDV
201: QVYPEKGTVA FSAGLHGWAF TLTNFAKMYA SKFGVDESKM MERLWGENFF DPATKKWTTK NTGSPTCKRG FVQFCYEPIK QIINTCMNDQ KEKLWPMLQK
301: LNVTMKADEK ELIGKALMKR VMQTWLPAST ALLEMMIFHL PSPAKAQKYR VENLYEGPLD DVYATAIRNC DPEGPLMLYV SKMIPASDKG RFFAFGRVFS
401: GKVATGMKVR IMGPNYVPGQ KKDLYVKSVQ RTVIWMGKKQ ESVEDVPCGN TVAMVGLDQF ITKNATLTNE KEVDACPIRA MKFSVSPVVR VAVQCKVASD
501: LPKLVEGLKR LAKSDPMVLC TIEESGEHII AGAGELHLEI CLKDLQEDFM GGAEIIVSPP VVSFRETVLE KSCRTVMSKS PNKHNRLYME ARPLEEGLAE
601: AIDEGRIGPR DDPKVRSQIL SQEFGWDKDL AKKIWCFGPE TTGPNMVVDM CKGVQYLNEI KDSVVAGFQW ASKEGALAEE NMRGICFEVC DVVLHADAIH
701: RGGGQVIPTA RRVIYASQLT AKPRLLEPVY LVEIQAPENA LGGIYGVLNQ KRGHVFEEMQ RPGTPLYNIK AYLPVIESFG FSSQLRAATS GQAFPQCVFD
801: HWDMMGSDPL EAGSQAAQLV LDIRKRKGLK EQMTPLSEFE DKL

Best Arabidopsis Sequence Match ( AT1G56070.1 )
(BLAST)

001: MVKFTADELR RIMDYKHNIR NMSVIAHVDH GKSTLTDSLV AAAGIIAQEV AGDVRMTDTR ADEAERGITI KSTGISLYYE MTDESLKSFT GARDGNEYLI
101: NLIDSPGHVD FSSEVTAALR ITDGALVVVD CIEGVCVQTE TVLRQALGER IRPVLTVNKM DRCFLELQVD GEEAYQTFSR VIENANVIMA TYEDPLLGDV
201: QVYPEKGTVA FSAGLHGWAF TLTNFAKMYA SKFGVVESKM MERLWGENFF DPATRKWSGK NTGSPTCKRG FVQFCYEPIK QIIATCMNDQ KDKLWPMLAK
301: LGVSMKNDEK ELMGKPLMKR VMQTWLPAST ALLEMMIFHL PSPHTAQRYR VENLYEGPLD DQYANAIRNC DPNGPLMLYV SKMIPASDKG RFFAFGRVFA
401: GKVSTGMKVR IMGPNYIPGE KKDLYTKSVQ RTVIWMGKRQ ETVEDVPCGN TVAMVGLDQF ITKNATLTNE KEVDAHPIRA MKFSVSPVVR VAVQCKVASD
501: LPKLVEGLKR LAKSDPMVVC TMEESGEHIV AGAGELHLEI CLKDLQDDFM GGAEIIKSDP VVSFRETVCD RSTRTVMSKS PNKHNRLYME ARPMEEGLAE
601: AIDDGRIGPR DDPKIRSKIL AEEFGWDKDL AKKIWAFGPE TTGPNMVVDM CKGVQYLNEI KDSVVAGFQW ASKEGPLAEE NMRGICFEVC DVVLHSDAIH
701: RGGGQVIPTA RRVIYASQIT AKPRLLEPVY MVEIQAPEGA LGGIYSVLNQ KRGHVFEEMQ RPGTPLYNIK AYLPVVESFG FSSQLRAATS GQAFPQCVFD
801: HWEMMSSDPL EPGTQASVLV ADIRKRKGLK EAMTPLSEFE DKL

Arabidopsis Description

LOS1Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.