Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49974 | Canola | nucleus | 96.47 | 96.47 |
| CDY54261 | Canola | nucleus | 95.29 | 35.22 |
| CDY70516 | Canola | cytosol | 97.65 | 16.31 |
| CDY32072 | Canola | cytosol | 100.0 | 13.14 |
| CDY05533 | Canola | cytosol | 98.82 | 12.86 |
| HORVU5Hr1G116710.1 | Barley | cytosol | 88.24 | 12.78 |
| TraesCS4A01G363900.1 | Wheat | plastid | 83.53 | 10.81 |
| CDX90241 | Canola | cytosol, extracellular | 97.65 | 10.49 |
| AT3G12915.2 | Thale cress | cytosol | 92.94 | 10.03 |
| CDY24982 | Canola | endoplasmic reticulum, vacuole | 97.65 | 9.9 |
| GSMUA_Achr10P... | Banana | cytosol | 89.41 | 9.86 |
| AT1G56070.2 | Thale cress | cytosol | 92.94 | 9.37 |
| Solyc08g062920.2.1 | Tomato | nucleus, plastid | 89.41 | 9.18 |
| TraesCS5D01G509700.1 | Wheat | cytosol | 88.24 | 9.09 |
| CDY32225 | Canola | nucleus | 37.65 | 9.04 |
| Zm00001d020342_P001 | Maize | mitochondrion | 42.35 | 9.02 |
| EES01455 | Sorghum | cytosol | 89.41 | 9.02 |
| KXG37185 | Sorghum | cytosol | 89.41 | 9.02 |
| KXG37183 | Sorghum | cytosol | 89.41 | 9.02 |
| KRH43759 | Soybean | nucleus | 89.41 | 9.02 |
| KRH13696 | Soybean | nucleus | 89.41 | 9.02 |
| Zm00001d012770_P001 | Maize | plastid | 88.24 | 8.9 |
| Zm00001d034776_P001 | Maize | cytosol | 88.24 | 8.9 |
| Zm00001d034773_P001 | Maize | cytosol | 88.24 | 8.9 |
| HORVU3Hr1G057880.1 | Barley | cytosol | 88.24 | 8.9 |
| HORVU3Hr1G057890.1 | Barley | cytosol | 88.24 | 8.9 |
| HORVU5Hr1G116580.1 | Barley | cytosol, plasma membrane | 88.24 | 8.9 |
| TraesCS5D01G509600.1 | Wheat | cytosol | 88.24 | 8.9 |
| TraesCS4A01G363800.1 | Wheat | cytosol, nucleus, plastid | 88.24 | 8.9 |
| TraesCS5B01G509500.1 | Wheat | cytosol, golgi, nucleus | 88.24 | 8.9 |
| TraesCS5B01G509600.1 | Wheat | cytosol, golgi | 88.24 | 8.9 |
| TraesCS3A01G232300.1 | Wheat | cytosol, golgi | 87.06 | 8.78 |
| Zm00001d034771_P002 | Maize | cytosol | 87.06 | 8.78 |
| TraesCS3B01G261500.1 | Wheat | cytosol | 87.06 | 8.78 |
| TraesCS3D01G220900.1 | Wheat | golgi | 87.06 | 8.78 |
| TraesCS1B01G033500.1 | Wheat | cytosol | 41.18 | 8.68 |
| VIT_19s0027g00760.t01 | Wine grape | cytosol | 87.06 | 8.68 |
| TraesCS7B01G362600.1 | Wheat | cytosol | 84.71 | 8.54 |
| TraesCS7D01G449300.1 | Wheat | cytosol | 84.71 | 8.54 |
| GSMUA_Achr4P01020_001 | Banana | cytosol | 87.06 | 8.52 |
| TraesCS5B01G509700.1 | Wheat | cytosol, golgi | 83.53 | 8.42 |
| TraesCS7A01G461100.1 | Wheat | cytosol, nucleus, unclear | 83.53 | 8.42 |
| TraesCS4A01G363700.1 | Wheat | cytosol, golgi, unclear | 83.53 | 8.42 |
| HORVU7Hr1G106150.1 | Barley | cytosol | 83.53 | 8.42 |
| Solyc08g062910.2.1 | Tomato | cytosol, extracellular, nucleus, unclear | 75.29 | 8.31 |
| CDY70689 | Canola | cytosol | 44.71 | 7.02 |
| KRH13692 | Soybean | cytosol, mitochondrion | 58.82 | 6.99 |
| CDY71233 | Canola | mitochondrion, nucleus | 44.71 | 6.81 |
| KRH13693 | Soybean | mitochondrion | 64.71 | 6.65 |
| Os01t0742200-01 | Rice | cytosol, nucleus | 60.0 | 6.17 |
| CDY23967 | Canola | cytosol | 8.24 | 6.03 |
| TraesCS1D01G026800.1 | Wheat | cytosol | 40.0 | 4.89 |
| TraesCS1D01G023700.1 | Wheat | cytosol | 48.24 | 4.88 |
| CDY15566 | Canola | cytosol | 44.71 | 4.56 |
| TraesCSU01G002600.1 | Wheat | cytosol | 41.18 | 4.06 |
| TraesCS1A01G027600.1 | Wheat | cytosol | 38.82 | 3.91 |
| CDY09982 | Canola | nucleus | 44.71 | 3.84 |
| CDY10688 | Canola | cytosol | 37.65 | 3.67 |
| HORVU1Hr1G003960.9 | Barley | cytosol | 30.59 | 2.82 |
| CDY46917 | Canola | plastid | 16.47 | 1.81 |
| CDY31838 | Canola | plastid | 16.47 | 1.81 |
| CDY40423 | Canola | cytosol | 14.12 | 1.52 |
| GSMUA_Achr6P22520_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 7.06 | 1.37 |
| CDX74705 | Canola | plastid | 11.76 | 1.32 |
| CDY18957 | Canola | plastid | 11.76 | 1.32 |
| CDX84803 | Canola | mitochondrion | 8.24 | 1.12 |
| KRH43761 | Soybean | cytosol, nucleus, plastid | 2.35 | 1.0 |
| CDY19061 | Canola | mitochondrion | 7.06 | 0.9 |
| CDY54484 | Canola | mitochondrion | 7.06 | 0.9 |
| CDX91105 | Canola | plastid | 7.06 | 0.89 |
| CDY65992 | Canola | plastid | 7.06 | 0.89 |
| CDY09816 | Canola | plastid | 7.06 | 0.89 |
| CDX85635 | Canola | plastid | 7.06 | 0.85 |
| CDY44781 | Canola | plastid | 5.88 | 0.74 |
| CDY40739 | Canola | plastid | 5.88 | 0.73 |
| CDX67441 | Canola | plastid | 4.71 | 0.58 |
| CDY65319 | Canola | endoplasmic reticulum, plastid, vacuole | 4.71 | 0.58 |
| CDX78349 | Canola | cytosol | 1.18 | 0.43 |
| CDY10337 | Canola | cytosol | 1.18 | 0.21 |
| CDY32224 | Canola | cytosol | 1.18 | 0.19 |
| OQU75622 | Sorghum | cytosol | 0.0 | 0.0 |
| Os05t0467501-00 | Rice | cytosol | 0.0 | 0.0 |
| TraesCS7A01G288600.1 | Wheat | cytosol | 0.0 | 0.0 |
| CDY49975 | Canola | cytosol | 0.0 | 0.0 |
| TraesCS6A01G189500.1 | Wheat | cytosol, nucleus, plastid | 0.0 | 0.0 |
| CDY69302 | Canola | cytosol | 0.0 | 0.0 |
| TraesCS5D01G509800.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS2A01G234500.1 | Wheat | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY70526 | EnsemblPlantsGene:GSBRNA2T00004148001 | Gene3D:3.30.70.240 | InterPro:EFG_III/V | InterPro:EFG_V-like | PANTHER:PTHR42908 |
| PANTHER:PTHR42908:SF11 | PFAM:PF00679 | ProteinID:CDY70526 | ProteinID:CDY70526.1 | SUPFAM:SSF54980 | UniParc:UPI0004EF0853 |
| UniProt:A0A078JYF8 | MapMan:35.1 | : | : | : | : |
Description
BnaAnng34020DBnaAnng34020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JYF8]
Coordinates
chrLK042394:+:380..943
Molecular Weight (calculated)
9531.4 Da
IEP (calculated)
5.795
GRAVY (calculated)
-0.433
Length
85 amino acids
Sequence
(BLAST)
(BLAST)
1: MQRPGTPLYN IKAYLPVVES FGFSSQLRAA TSGQAFPQCV FDHWEMMSSD PLETGSQAST LVADIRKRKG MKEQMTPLSD FEDKL
001: MVKFTADELR RIMDYKHNIR NMSVIAHVDH GKSTLTDSLV AAAGIIAQEV AGDVRMTDTR ADEAERGITI KSTGISLYYE MTDESLKSFT GARDGNEYLI
101: NLIDSPGHVD FSSEVTAALR ITDGALVVVD CIEGVCVQTE TVLRQALGER IRPVLTVNKM DRCFLELQVD GEEAYQTFSR VIENANVIMA TYEDPLLGDV
201: QVYPEKGTVA FSAGLHGWAF TLTNFAKMYA SKFGVVESKM MERLWGENFF DPATRKWSGK NTGSPTCKRG FVQFCYEPIK QIIATCMNDQ KDKLWPMLAK
301: LGVSMKNDEK ELMGKPLMKR VMQTWLPAST ALLEMMIFHL PSPHTAQRYR VENLYEGPLD DQYANAIRNC DPNGPLMLYV SKMIPASDKG RFFAFGRVFA
401: GKVSTGMKVR IMGPNYIPGE KKDLYTKSVQ RTVIWMGKRQ ETVEDVPCGN TVAMVGLDQF ITKNATLTNE KEVDAHPIRA MKFSVSPVVR VAVQCKVASD
501: LPKLVEGLKR LAKSDPMVVC TMEESGEHIV AGAGELHLEI CLKDLQDDFM GGAEIIKSDP VVSFRETVCD RSTRTVMSKS PNKHNRLYME ARPMEEGLAE
601: AIDDGRIGPR DDPKIRSKIL AEEFGWDKDL AKKIWAFGPE TTGPNMVVDM CKGVQYLNEI KDSVVAGFQW ASKEGPLAEE NMRGICFEVC DVVLHSDAIH
701: RGGGQVIPTA RRVIYASQIT AKPRLLEPVY MVEIQAPEGA LGGIYSVLNQ KRGHVFEEMQ RPGTPLYNIK AYLPVVESFG FSSQLRAATS GQAFPQCVFD
801: HWEMMSSDPL EPGTQASVLV ADIRKRKGLK EAMTPLSEFE DKL
101: NLIDSPGHVD FSSEVTAALR ITDGALVVVD CIEGVCVQTE TVLRQALGER IRPVLTVNKM DRCFLELQVD GEEAYQTFSR VIENANVIMA TYEDPLLGDV
201: QVYPEKGTVA FSAGLHGWAF TLTNFAKMYA SKFGVVESKM MERLWGENFF DPATRKWSGK NTGSPTCKRG FVQFCYEPIK QIIATCMNDQ KDKLWPMLAK
301: LGVSMKNDEK ELMGKPLMKR VMQTWLPAST ALLEMMIFHL PSPHTAQRYR VENLYEGPLD DQYANAIRNC DPNGPLMLYV SKMIPASDKG RFFAFGRVFA
401: GKVSTGMKVR IMGPNYIPGE KKDLYTKSVQ RTVIWMGKRQ ETVEDVPCGN TVAMVGLDQF ITKNATLTNE KEVDAHPIRA MKFSVSPVVR VAVQCKVASD
501: LPKLVEGLKR LAKSDPMVVC TMEESGEHIV AGAGELHLEI CLKDLQDDFM GGAEIIKSDP VVSFRETVCD RSTRTVMSKS PNKHNRLYME ARPMEEGLAE
601: AIDDGRIGPR DDPKIRSKIL AEEFGWDKDL AKKIWAFGPE TTGPNMVVDM CKGVQYLNEI KDSVVAGFQW ASKEGPLAEE NMRGICFEVC DVVLHSDAIH
701: RGGGQVIPTA RRVIYASQIT AKPRLLEPVY MVEIQAPEGA LGGIYSVLNQ KRGHVFEEMQ RPGTPLYNIK AYLPVVESFG FSSQLRAATS GQAFPQCVFD
801: HWEMMSSDPL EPGTQASVLV ADIRKRKGLK EAMTPLSEFE DKL
Arabidopsis Description
LOS1Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASR1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.