CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, vacuole

Predictor Summary:

plastid 3
mitochondrion 3
endoplasmic reticulum 2
extracellular 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plastid, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028444.1-P	Field mustard	mitochondrion	94.19	98.03
CDX67441	Canola	plastid	96.51	96.79
AT5G39900.1	Thale cress	mitochondrion	90.84	94.27
KRH40434	Soybean	mitochondrion	75.58	77.04
PGSC0003DMT400034344	Potato	mitochondrion	73.4	76.63
Solyc03g058880.2.1	Tomato	mitochondrion	73.4	76.52
VIT_14s0108g00130.t01	Wine grape	mitochondrion, plastid	75.29	76.06
GSMUA_Achr10P...	Banana	mitochondrion	73.11	74.52
EER89181	Sorghum	mitochondrion	71.8	74.29
Os06t0144800-01	Rice	mitochondrion	71.51	74.21
TraesCS4A01G386100.3	Wheat	mitochondrion	71.51	73.87
HORVU7Hr1G019550.9	Barley	mitochondrion	71.66	73.8
TraesCS7D01G081700.2	Wheat	mitochondrion	71.37	73.72
TraesCS7A01G087200.1	Wheat	mitochondrion	71.22	73.57
Zm00001d000213_P001	Maize	mitochondrion	71.66	72.5
KRH00796	Soybean	nucleus	48.4	50.68
CDY44781	Canola	plastid	46.08	46.96
CDY40739	Canola	plastid	45.78	46.05
CDX78349	Canola	cytosol	15.41	45.89
CDY54484	Canola	mitochondrion	22.67	23.32
CDX84803	Canola	mitochondrion	20.93	23.08
CDY19061	Canola	mitochondrion	22.38	23.02
CDY65992	Canola	plastid	22.24	22.7
CDY09816	Canola	plastid	22.24	22.67
CDX91105	Canola	plastid	21.95	22.4
CDX85635	Canola	plastid	22.24	21.61
CDY10337	Canola	cytosol	13.81	20.04
CDY69302	Canola	cytosol	9.01	19.44
CDY49975	Canola	cytosol	10.76	18.55
CDX74705	Canola	plastid	17.73	16.16
CDY18957	Canola	plastid	17.59	16.01
CDY40423	Canola	cytosol	17.15	14.99
CDY32224	Canola	cytosol	11.19	14.95
CDY46917	Canola	plastid	16.72	14.84
CDX90241	Canola	cytosol, extracellular	17.01	14.79
CDY31838	Canola	plastid	16.57	14.71
CDY24982	Canola	endoplasmic reticulum, vacuole	17.88	14.68
CDY10688	Canola	cytosol	18.46	14.56
CDY23967	Canola	cytosol	2.18	12.93
CDY15566	Canola	cytosol	15.26	12.61
CDY09982	Canola	nucleus	17.73	12.34
CDY70516	Canola	cytosol	8.43	11.39
CDY70689	Canola	cytosol	8.14	10.35
CDY71233	Canola	mitochondrion, nucleus	8.14	10.04
CDY32072	Canola	cytosol	9.16	9.74
CDY05533	Canola	cytosol	9.16	9.65
CDY32225	Canola	nucleus	3.78	7.34
CDY54261	Canola	nucleus	1.6	4.78
CDY49974	Canola	nucleus	0.58	4.71
CDY70526	Canola	nucleus	0.58	4.71

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.30.70.2570	Gene3D:3.30.70.3380	Gene3D:3.30.70.870	Gene3D:3.40.50.300	MapMan:35.1
GO:A0A078JF71	UniProt:A0A078JF71	EnsemblPlants:CDY65319	ProteinID:CDY65319	ProteinID:CDY65319.1	InterPro:EF-4
InterPro:EFG_III/V	InterPro:EFG_V-like	InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0005759	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0019538
GO:GO:0043022	GO:GO:0045727	EnsemblPlantsGene:GSBRNA2T00045598001	InterPro:G_TR_CS	InterPro:IPR000795	InterPro:IPR038363
InterPro:LepA_CTD	InterPro:LepA_C_sf	InterPro:LepA_IV	HAMAP:MF_00071	InterPro:P-loop_NTPase	PFAM:PF00009
PFAM:PF00679	PFAM:PF03144	PFAM:PF06421	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722
PANTHER:PTHR43512	PANTHER:PTHR43512:SF3	SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54980	SignalP:SignalP-noTM
InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR01393	InterPro:Transl_B-barrel_sf	UniParc:UPI0004EC1FA8
SEG:seg	:	:	:	:	:

Description

BnaC06g42230DTranslation factor GUF1 homolog, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A078JF71]

Coordinates

chrLK034731:+:2239..4464

Molecular Weight (calculated)

76427.5 Da

IEP (calculated)

8.002

GRAVY (calculated)

-0.134

Length

688 amino acids

Sequence
(BLAST)

001: MCSLNIFVVL RVETVRLTLL LQNPQMGSMY RASKTLKSSR QALSLLFNSV KPNRRDPLCV GLHPAYGFSS DSKQNPREPA VDLTQFPSDK IRNFSIIAHI
101: DHGKSTLADR LMELTGTIKK GHGQPQYLDK LQVERERGIT VKAQTATMLY ENKVKDEEAS GFLLNLIDTP GHVDFSYEVS RSLSACQGAL LVVDAAQGVQ
201: AQTVANFYLA FEANLTVVPV INKIDQPTAD PDRVKAQLKS MFDLDTDEVL LVSAKTGLGL EHVLPAVIER IPPPPGISDS PLRMLLFDSF FNEYKGVVCY
301: VSVVDGMLRK GDKVSFAATG QSYEVLDVGI MHPELTSTGM LLTGQVGYIV TGMRTTKEAR IGDTIYRTKT TVEPLPGFKP VRHMVFSGVY PADGSDFEAL
401: THAIEKLTCN DASVSVAKET SAALGMGFRC GFLGLLHMDV FHQRLEQEYG TQVISTIPTV PYTFEYSDGS KLQVQNPAAL PSNPKYRVTA SWEPTVIATI
501: ILPSEYVGAV INLCSDRRGQ QLEYTFIDAQ RVFLKYQLPL REVVVDFYDE LKSLTSGYAS FDYEDAEYQK SDLVKLDILL NGQAVDALAT IVHNQKAYRV
601: GKELVEKLKN FIERQMFEVM IQAAIGSKII ARDTISAMRK NVLAKCYGGD ITRKKKLLEK QKEGKKRMKR VGSVDIPHEA FQQILKVS

Best Arabidopsis Sequence Match ( AT5G39900.1 )
(BLAST)

001: MGSMYRASKT LKSSRQALSI LFNSLNSNRQ NPTCIGLYQA YGFSSDSRQS SKEPTIDLTK FPSEKIRNFS IIAHIDHGKS TLADRLMELT GTIKKGHGQP
101: QYLDKLQVER ERGITVKAQT ATMFYENKVE DQEASGYLLN LIDTPGHVDF SYEVSRSLSA CQGALLVVDA AQGVQAQTVA NFYLAFEANL TIVPVINKID
201: QPTADPERVK AQLKSMFDLD TEDVLLVSAK TGLGLEHVLP AVIERIPPPP GISESPLRML LFDSFFNEYK GVICYVSVVD GMLSKGDKVS FAASGQSYEV
301: LDVGIMHPEL TSTGMLLTGQ VGYIVTGMRT TKEARIGDTI YRTKTTVEPL PGFKPVRHMV FSGVYPADGS DFEALGHAME KLTCNDASVS VAKETSTALG
401: MGFRCGFLGL LHMDVFHQRL EQEYGTQVIS TIPTVPYTFE YSDGSKLQVQ NPAALPSNPK YRVTASWEPT VIATIILPSE YVGAVINLCS DRRGQQLEYT
501: FIDAQRVFLK YQLPLREIVV DFYDELKSIT SGYASFDYED AEYQASDLVK LDILLNGQAV DALATIVHKQ KAYRVGKELV EKLKNYIERQ MFEVMIQAAI
601: GSKIIARDTI SAMRKNVLAK CYGGDITRKK KLLEKQKEGK KRMKRVGSVD IPHEAFQQIL KVS

Arabidopsis Description

Translation factor GUF1 homolog, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLE4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.