Factsheet for VIT_14s0108g00130.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
cytosol 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g058880.2.1	Tomato	mitochondrion	83.26	85.91
PGSC0003DMT400034344	Potato	mitochondrion	82.97	85.74
GSMUA_Achr10P...	Banana	mitochondrion	83.99	84.74
KRH40434	Soybean	mitochondrion	82.82	83.56
Os06t0144800-01	Rice	mitochondrion	78.85	81.0
EER89181	Sorghum	mitochondrion	78.56	80.45
TraesCS4A01G386100.3	Wheat	mitochondrion	77.09	78.83
TraesCS7D01G081700.2	Wheat	mitochondrion	76.95	78.68
HORVU7Hr1G019550.9	Barley	mitochondrion	77.09	78.59
TraesCS7A01G087200.1	Wheat	mitochondrion	76.65	78.38
Bra028444.1-P	Field mustard	mitochondrion	76.06	78.37
Zm00001d000213_P001	Maize	mitochondrion	77.97	78.09
AT5G39900.1	Thale cress	mitochondrion	75.92	77.98
CDX67441	Canola	plastid	76.21	75.66
CDY65319	Canola	endoplasmic reticulum, plastid, vacuole	76.06	75.29
KRH00796	Soybean	nucleus	53.16	55.1
VIT_07s0031g03050.t01	Wine grape	plastid	46.84	46.91
VIT_12s0028g02640.t01	Wine grape	mitochondrion, plastid	23.05	23.36
VIT_08s0007g08290.t01	Wine grape	plastid	22.91	23.11
VIT_15s0021g02450.t01	Wine grape	mitochondrion, plastid	18.5	16.89
VIT_00s0323g00080.t01	Wine grape	plastid	16.89	14.84
VIT_19s0027g00760.t01	Wine grape	cytosol	18.21	14.54
VIT_04s0044g01790.t01	Wine grape	cytosol	18.21	12.04
VIT_11s0118g00720.t01	Wine grape	nucleus	16.3	11.23
VIT_00s1286g00020.t01	Wine grape	cytosol, mitochondrion	2.64	8.53

Protein Annotations

EntrezGene:100250775	wikigene:100250775	Gene3D:2.40.30.10	Gene3D:3.30.70.2570	Gene3D:3.30.70.3380	Gene3D:3.30.70.870
Gene3D:3.40.50.300	MapMan:35.1	ProteinID:CCB47512	ProteinID:CCB47512.1	InterPro:EF-4	InterPro:EFG_III/V
InterPro:EFG_V-like	UniProt:F6H5P1	EMBL:FN595239	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0005759	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0019538
GO:GO:0043022	GO:GO:0045727	InterPro:G_TR_CS	InterPro:IPR000795	InterPro:IPR038363	EntrezGene:LOC100250775
wikigene:LOC100250775	InterPro:LepA_CTD	InterPro:LepA_C_sf	InterPro:LepA_IV	HAMAP:MF_00071	InterPro:P-loop_NTPase
PFAM:PF00009	PFAM:PF00679	PFAM:PF06421	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722
PANTHER:PTHR43512	PANTHER:PTHR43512:SF3	SUPFAM:SSF52540	SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom
TIGRFAMs:TIGR00231	TIGRFAMs:TIGR01393	UniParc:UPI00015C9C9F	ArrayExpress:VIT_14s0108g00130	EnsemblPlantsGene:VIT_14s0108g00130	EnsemblPlants:VIT_14s0108g00130.t01
RefSeq:XP_002277245	RefSeq:XP_002277245.1	SEG:seg	:	:	:

Description

Translation factor GUF1 homolog, mitochondrial [Source:UniProtKB/TrEMBL;Acc:F6H5P1]

Coordinates

chr14:-:28926980..28934094

Molecular Weight (calculated)

75355.7 Da

IEP (calculated)

8.213

GRAVY (calculated)

-0.183

Length

681 amino acids

Sequence
(BLAST)

001: MGYLNGASKT LKSPKYLSLL CRHRSSAFSP FSPVTGCNPV KGLLGWHHFG WSHTFCSRSL QNSRDSSVDL SQYPPERIRN FSIIAHVDHG KSTLADRLLE
101: LTGTIKRGHG QPQYLDKLQV ERERGITVKA QTATMFHRHN FDGPDVTIAQ ESPSFLLNLI DTPGHVDFSY EVSRSLAACQ GVLLVVDAAQ GVQAQTVANF
201: YLAFESNLTI IPVINKIDQP TADPDHVKAQ LKSMFDLNPS DALLTSAKTG QGLEQVLPAV IERIPPPPGK SCSPLRMLLL DSYYDEYKGV ICHVAVVDGA
301: LRKGDKISSS ATGHTYEVFD VGIMHPELKS TGVLLTGQVG YVVSGMRSTK EARVGDTLHH NKSIVEPLPG FKPAKHMVFS GLYPADGSDF EALNHAIERL
401: TCNDASVSVT KESSTALGLG FRCGFLGLLH MDVFHQRLEQ EYGAHIISTV PTVPYIFEYS DGSKIQVQNP AALASNPGKR VTACWEPTVI ATIIIPSEYV
501: GPVITLCSER RGEQLEYSFI DSQRAFMKYR LPLREIVVDF YNELKSITSG YASFDYEDAE YQASDLVKLD ILLNGQPVDA MATIVHNLKA QRVGRELVEK
601: LKKFIDRQMF EIVIQAAIGS KIIARETISA MRKNVLAKCY GGDVTRKRKL LEKQKEGKKR MKRVGSVDIP QEAFHELLKV S

Best Arabidopsis Sequence Match ( AT5G39900.1 )
(BLAST)

001: MGSMYRASKT LKSSRQALSI LFNSLNSNRQ NPTCIGLYQA YGFSSDSRQS SKEPTIDLTK FPSEKIRNFS IIAHIDHGKS TLADRLMELT GTIKKGHGQP
101: QYLDKLQVER ERGITVKAQT ATMFYENKVE DQEASGYLLN LIDTPGHVDF SYEVSRSLSA CQGALLVVDA AQGVQAQTVA NFYLAFEANL TIVPVINKID
201: QPTADPERVK AQLKSMFDLD TEDVLLVSAK TGLGLEHVLP AVIERIPPPP GISESPLRML LFDSFFNEYK GVICYVSVVD GMLSKGDKVS FAASGQSYEV
301: LDVGIMHPEL TSTGMLLTGQ VGYIVTGMRT TKEARIGDTI YRTKTTVEPL PGFKPVRHMV FSGVYPADGS DFEALGHAME KLTCNDASVS VAKETSTALG
401: MGFRCGFLGL LHMDVFHQRL EQEYGTQVIS TIPTVPYTFE YSDGSKLQVQ NPAALPSNPK YRVTASWEPT VIATIILPSE YVGAVINLCS DRRGQQLEYT
501: FIDAQRVFLK YQLPLREIVV DFYDELKSIT SGYASFDYED AEYQASDLVK LDILLNGQAV DALATIVHKQ KAYRVGKELV EKLKNYIERQ MFEVMIQAAI
601: GSKIIARDTI SAMRKNVLAK CYGGDITRKK KLLEKQKEGK KRMKRVGSVD IPHEAFQQIL KVS

Arabidopsis Description

Translation factor GUF1 homolog, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLE4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.