CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40434	Soybean	mitochondrion	61.19	59.56
PGSC0003DMT400034344	Potato	mitochondrion	53.42	53.26
VIT_14s0108g00130.t01	Wine grape	mitochondrion, plastid	55.1	53.16
Solyc03g058880.2.1	Tomato	mitochondrion	52.97	52.73
GSMUA_Achr10P...	Banana	mitochondrion	51.6	50.22
Os06t0144800-01	Rice	mitochondrion	50.38	49.92
EER89181	Sorghum	mitochondrion	50.38	49.77
Bra028444.1-P	Field mustard	mitochondrion	50.08	49.77
AT5G39900.1	Thale cress	mitochondrion	50.08	49.62
TraesCS7D01G081700.2	Wheat	mitochondrion	49.32	48.65
TraesCS4A01G386100.3	Wheat	mitochondrion	49.16	48.5
CDY65319	Canola	endoplasmic reticulum, plastid, vacuole	50.68	48.4
CDX67441	Canola	plastid	50.53	48.4
Zm00001d000213_P001	Maize	mitochondrion	50.08	48.38
HORVU7Hr1G019550.9	Barley	mitochondrion	49.16	48.35
TraesCS7A01G087200.1	Wheat	mitochondrion	48.86	48.2
KRH53996	Soybean	plasma membrane	32.27	30.86
KRH63332	Soybean	cytosol	11.87	28.78
KRH63943	Soybean	plastid	32.12	28.13
KRH75280	Soybean	mitochondrion	3.96	19.7
KRH63330	Soybean	cytosol, plasma membrane	7.31	17.84
KRH55837	Soybean	plastid	14.76	14.48
KRH71976	Soybean	nucleus	14.76	14.35
KRH25682	Soybean	plastid	14.61	14.33
KRH33159	Soybean	nucleus	14.76	14.26
KRH40894	Soybean	cytosol	7.0	13.29
KRH75282	Soybean	cytosol	3.35	11.28
KRH13692	Soybean	cytosol, mitochondrion	11.26	10.35
KRG88956	Soybean	mitochondrion	10.96	10.33
KRH43759	Soybean	nucleus	12.33	9.61
KRH13696	Soybean	nucleus	12.18	9.49
KRH13693	Soybean	mitochondrion	11.87	9.43
KRH57341	Soybean	nucleus, plastid	10.35	8.72
KRH04069	Soybean	nucleus, plastid	10.35	8.64
KRG94823	Soybean	cytosol	12.18	7.83
KRH03566	Soybean	nucleus	11.11	7.39
KRH20245	Soybean	nucleus	10.96	7.3
KRH75283	Soybean	cytosol, mitochondrion	4.11	6.15
KRH43761	Soybean	cytosol, nucleus, plastid	0.91	3.0

Protein Annotations

Gene3D:3.30.70.2570	Gene3D:3.30.70.3380	Gene3D:3.30.70.870	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A0R0F3B5
EMBL:ACUP02011472	InterPro:EFG_III/V	InterPro:EFG_V-like	EnsemblPlantsGene:GLYMA_18G234500	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005515	GO:GO:0005525	GO:GO:0006950
GO:GO:0006952	GO:GO:0008150	GO:GO:0016787	GO:GO:0043531	InterPro:G_TR_CS	InterPro:IPR000795
InterPro:IPR001611	InterPro:IPR038363	EnsemblPlants:KRH00796	ProteinID:KRH00796	ProteinID:KRH00796.1	InterPro:LepA_CTD
InterPro:LepA_C_sf	InterPro:LepA_IV	InterPro:Leu-rich_rpt	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00009
PFAM:PF00679	PFAM:PF00931	PFAM:PF06421	PFAM:PF13855	PRINTS:PR00315	ScanProsite:PS00301
PFscan:PS51450	PFscan:PS51722	PANTHER:PTHR43512	PANTHER:PTHR43512:SF3	SUPFAM:SSF52058	SUPFAM:SSF52540
SUPFAM:SSF54980	InterPro:TF_GTP-bd_dom	UniParc:UPI0006EDA7D3	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr18:+:52275968..52281014

Molecular Weight (calculated)

73728.1 Da

IEP (calculated)

5.957

GRAVY (calculated)

-0.319

Length

657 amino acids

Sequence
(BLAST)

001: MDFIGPVLDL IIRMWDSLPA SSNEIPLEAT VGLESTFDEL SGCFDDNHVG VIGLYGIGGV GKTTQLKKFN NEFLPTKFYD VSIWAVVSRK APEFGDDVYE
101: ARNQGEEIIA SLKLTCLLED RERENRIKMH DMIRDMALWL ACDHGSNTRF LVKDDACSRK SDCSNLSTMI VRNSELTDLS DEIFLTANTL GVLDLSGNKR
201: VKELHAIIGE LVSLQHLDLS GTGIQELPRE LQNLKKLSTT REKSTIDLSQ YPTELVRNFS IIAYVDHGKF TLADRLLELT GTIKKGHGQP QYLDKLQVER
301: ERGITVKAQT ATMFYKHSVN GNDCNDGKEG NESPKFLLNL IDTPGHVDFS YEVSSPRLTM HKIDQPTSDP DCAKAQLKSY ADGSDFEALN HAIERLTCND
401: ASVSITKETS TALGLGFRCG FLGLLHMDVF HQRLEQEYGA HVISTVPTVP YVFEFHDGSK LEVQNPASLP SNPKHKVTAC WEPTVLATII IPSEYVGPVI
501: TLVSERRGQQ LEYSFIDSQR VFMKYCLPLR EIVVDFYNEL KSITSGYASF DYEDSDYQQA DMVKLDILLN GQPVDAMATI VHNTKAYRVG RELTEKLKGV
601: LDRISAMRKN VLAKCYGGDV SRKRKLLEKQ KEGKKRMKRV GSVDVPQEAF HELLKVS

Best Arabidopsis Sequence Match ( AT5G08650.1 )
(BLAST)

001: MAMASAMDLS SPPTFFLSGT STSSPSLRRL SSISVSGFRR HSNRKLQILC QATAGTEPQS GLSVSGSKLA ARSGQDRLLK VPISNIRNFS IIAHIDHGKS
101: TLADKLLQVT GTVQNRDMKE QFLDNMDLER ERGITIKLQA ARMRYVYEDT PFCLNLIDTP GHVDFSYEVS RSLAACEGAL LVVDASQGVE AQTLANVYLA
201: LENNLEIIPV LNKIDLPGAE PEKVLREIEE VIGLDCSKAI FCSAKEGIGI TEILDAIVQR IPAPLDTAGK PLRALIFDSY YDPYRGVIVY FRVIDGKVKK
301: GDRIFFMASG KDYFADEVGV LSPNQIQVDE LYAGEVGYIA ASVRSVADAR VGDTITHYSR KAESSLPGYE EATPMVFCGL FPVDADQFPD LRDALEKLQL
401: NDAALKFEPE TSSAMGFGFR CGFLGLLHME IVQERLEREY NLNLITTAPS VVYRVNSVNG DTTLCSNPSR LPDPGQRKSV EEPYVKIELL TPKDYIGALM
501: ELAQERRGEF KEMKYIAENR ASILYELPLA EMVGDFFDQL KSRTKGYASM EYSVIGYRES DLIKLDILIN AEMVEPLSTI VHRDKAYSVG RALTQKLKEL
601: IPRQMFKVPI QACIGSKVIA SEALSAIRKD VLAKCYGGDI SRKKKLLKKQ AAGKKRMKAI GRVDVPQEAF MAVLKLEREV L

Arabidopsis Description

Translation factor GUF1 homolog, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A178USI8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.