CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10337	Canola	cytosol	64.74	47.26
CDY32224	Canola	cytosol	53.76	36.12
KRH43761	Soybean	cytosol, nucleus, plastid	20.23	35.0
KRG94823	Soybean	cytosol	97.69	33.07
CDY10688	Canola	cytosol	65.03	25.8
AT3G22980.2	Thale cress	cytosol	73.41	25.02
PGSC0003DMT400007735	Potato	cytosol	73.41	24.83
Solyc11g071770.1.1	Tomato	cytosol	73.41	24.8
GSMUA_Achr2P17400_001	Banana	cytosol	58.96	24.76
VIT_04s0044g01790.t01	Wine grape	cytosol	72.83	24.47
KRH75282	Soybean	cytosol	13.58	24.1
Bra033543.1-P	Field mustard	cytosol	58.38	22.2
Os03t0650700-01	Rice	cytosol	64.16	21.57
TraesCS5A01G370800.1	Wheat	cytosol	63.01	20.86
TraesCS5D01G380500.1	Wheat	cytosol	63.01	20.86
TraesCS5B01G373200.1	Wheat	cytosol	62.72	20.77
Zm00001d033505_P001	Maize	cytosol	58.67	19.44
KXG37923	Sorghum	cytosol	58.67	19.43
HORVU5Hr1G092260.1	Barley	nucleus, plastid	62.72	18.61
KRH75280	Soybean	mitochondrion	6.94	18.18
TraesCS1D01G049600.1	Wheat	cytosol	49.13	17.75
TraesCS1B01G062700.1	Wheat	cytosol	49.13	16.9
TraesCS1A01G048300.1	Wheat	mitochondrion, nucleus, plastid	48.27	16.87
Os02t0543300-00	Rice	mitochondrion	47.98	16.52
KRH13693	Soybean	mitochondrion	36.99	15.48
KRH13696	Soybean	nucleus	36.13	14.83
KRH43759	Soybean	nucleus	36.13	14.83
KRH13692	Soybean	cytosol, mitochondrion	24.57	11.89
KRH20245	Soybean	nucleus	29.48	10.34
KRH03566	Soybean	nucleus	28.9	10.12
KRH40434	Soybean	mitochondrion	19.65	10.07
KXG30393	Sorghum	nucleus	25.43	9.98
KRG88956	Soybean	mitochondrion	19.94	9.9
KRH53996	Soybean	plasma membrane	19.65	9.9
KRH57341	Soybean	nucleus, plastid	21.68	9.62
KRH25682	Soybean	plastid	18.5	9.55
KRH55837	Soybean	plastid	18.5	9.55
KRH04069	Soybean	nucleus, plastid	21.68	9.53
KRH63943	Soybean	plastid	19.94	9.2
KRH71976	Soybean	nucleus	17.92	9.17
KRH33159	Soybean	nucleus	17.92	9.12
KRH00796	Soybean	nucleus	13.29	7.0
HORVU1Hr1G009320.1	Barley	nucleus	17.63	6.82
KRH63330	Soybean	cytosol, plasma membrane	1.16	1.49
Bra033895.1-P	Field mustard	cytosol, nucleus, plastid	1.45	1.04
KRH75283	Soybean	cytosol, mitochondrion	1.16	0.91
CDY32225	Canola	nucleus	0.58	0.56
KRH63332	Soybean	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.90.1430.10	MapMan:35.1	UniProt:A0A0R0IEL2	EMBL:ACUP02006068	EnsemblPlantsGene:GLYMA_09G283700
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	InterPro:IPR000795	EnsemblPlants:KRH40894	ProteinID:KRH40894	ProteinID:KRH40894.1	InterPro:P-loop_NTPase
PFAM:PF00009	PRINTS:PR00315	PFscan:PS51722	PANTHER:PTHR42908	PANTHER:PTHR42908:SF3	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	UniParc:UPI0006EDB83B	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:-:49911997..49913036

Molecular Weight (calculated)

38595.6 Da

IEP (calculated)

7.804

GRAVY (calculated)

-0.105

Length

346 amino acids

Sequence
(BLAST)

001: MEEGSSDCID NERDLIRNIC ILAHVDHGKT TLADHLIAAA GGGVVHPKLA GRVRFMDYLD EEQRRAITMK SSSILLRYAG RYAVNLIDSP GHIDFCSEVS
101: TAARLSDGAL LLVDAVEGVH IQTHAVLRQC WIERLTPCLV LNKLDRLITE LKLTPSEAYT RLLRIVHEVN GIVSAYKSEK YLTDVDSLLA GTGTGTTTGE
201: TLEDYDDNED VFQPQKGNVI FACALDGWGF GIREFAEIYA SKLGASVNAL LRALWGQRYY NPKTKMIVGK KGVGGNKKPM FVQFVLEPLW QVYQGALEGD
301: KGLVEKVIRT FSLSVPQREL QNKDVKVVLQ AVMSAGFRFR RRFCRW

Best Arabidopsis Sequence Match ( AT3G22980.1 )
(BLAST)

0001: MDESEGRKVR NICILAHVDH GKTTLADHLI ASSGGGVLHP RLAGKLRFMD YLDEEQRRAI TMKSSSISLK YKDYSLNLID SPGHMDFCSE VSTAARLSDG
0101: ALVLVDAVEG VHIQTHAVLR QAWIEKLTPC LVLNKIDRLI FELRLSPMEA YTRLIRIVHE VNGIVSAYKS EKYLSDVDSI LASPSGELSA ESLELLEDDE
0201: EVTFQPQKGN VVFVCALDGW GFGIAEFANF YASKLGASAT ALQKSLWGPR YYIPKTKMIV GKKNLSAGSK AKPMFVQFVL EPLWQVYEAA LDPGGDKAVL
0301: EKVIKSFNLS IPPRELQNKD PKNVLQSVMS RWLPLSDAVL SMAVKHLPDP IAAQAYRIPR LVPERKIIGG DDVDSSVLAE AELVRKSIEA CDSSSDSPCV
0401: VFVSKMFAIP MKMIPQDGNH RERMNGLNDD DSKSESDECF LAFARIFSGV LRAGQRVFVI TALYDPLKGE SSHKYIQEAE LHSLYLMMGQ GLTPVTEVKA
0501: GNVVAIRGLG PYISKSATLS STRNCWPLAS MEFQVSPTLR VAIEPSDPAD MSALMKGLRL LNRADPFVEI TVSARGEHVL AAAGEVHLER CVKDLKERFA
0601: KVNLEVSPPL VSYRETIEGD GSNLLESLRS LSLNSSDYIE KRTPNGRCII RVHVMKLPHA LTKLLDENTE LLGDIIGGKG SHSVKILESQ KPSLGENVDP
0701: IEELKKQLVE AGVSSSSETE KDREKCKTEW SKLLKRIWAL GPREKGPNIL FAPDGKRIAE DGSMLVRGSP HVSQRLGFTE DSTETPAEVS ETALYSEALT
0801: LESSIVSGFQ LATASGPLCD EPMWGLAFTI ESHLAPAEDV ETDKPENFGI FTGQVMTAVK DACRAAVLQT NPRIVEAMYF CELNTAPEYL GPMYAVLSRR
0901: RARILKEEMQ EGSSLFTVHA YVPVSESFGF ADELRKGTSG GASALMVLSH WEMLEEDPFF VPKTEEEIEE FGDGASVLPN TARKLINAVR RRKGLHVEEK
1001: VVQYATKQRT LARKV

Arabidopsis Description

Ribosomal protein S5/Elongation factor G/III/V family protein [Source:UniProtKB/TrEMBL;Acc:F4J2T9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.