Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G049600.1 | Wheat | cytosol | 91.25 | 95.82 |
| TraesCS1A01G048300.1 | Wheat | mitochondrion, nucleus, plastid | 94.04 | 95.56 |
| HORVU1Hr1G009320.1 | Barley | nucleus | 70.78 | 79.64 |
| KXG30393 | Sorghum | nucleus | 52.88 | 60.32 |
| TraesCS5B01G373200.1 | Wheat | cytosol | 62.03 | 59.71 |
| Os02t0543300-00 | Rice | mitochondrion | 58.05 | 58.11 |
| CDY10337 | Canola | cytosol | 25.15 | 53.38 |
| CDY10688 | Canola | cytosol | 44.53 | 51.38 |
| GSMUA_Achr2P17400_001 | Banana | cytosol | 41.25 | 50.36 |
| KRG94823 | Soybean | cytosol | 51.09 | 50.29 |
| Solyc11g071770.1.1 | Tomato | cytosol | 51.19 | 50.29 |
| VIT_04s0044g01790.t01 | Wine grape | cytosol | 51.49 | 50.29 |
| PGSC0003DMT400007735 | Potato | cytosol | 51.09 | 50.24 |
| CDY32224 | Canola | cytosol | 25.35 | 49.51 |
| AT3G22980.2 | Thale cress | cytosol | 49.8 | 49.36 |
| KRH40894 | Soybean | cytosol | 16.9 | 49.13 |
| Bra033895.1-P | Field mustard | cytosol, nucleus, plastid | 22.66 | 47.4 |
| Bra033543.1-P | Field mustard | cytosol | 42.45 | 46.92 |
| CDY32225 | Canola | nucleus | 16.0 | 45.48 |
| TraesCS5B01G509500.1 | Wheat | cytosol, golgi, nucleus | 27.04 | 32.27 |
| TraesCS5B01G509600.1 | Wheat | cytosol, golgi | 27.04 | 32.27 |
| TraesCS5B01G509700.1 | Wheat | cytosol, golgi | 26.94 | 32.15 |
| TraesCS3B01G261500.1 | Wheat | cytosol | 26.84 | 32.03 |
| TraesCS7B01G362600.1 | Wheat | cytosol | 26.84 | 32.03 |
| TraesCS1B01G033500.1 | Wheat | cytosol | 11.23 | 28.04 |
| TraesCS7B01G282300.1 | Wheat | cytosol | 24.16 | 24.45 |
| TraesCS2B01G404600.1 | Wheat | plastid | 15.51 | 20.31 |
| TraesCS3B01G326200.1 | Wheat | mitochondrion | 13.02 | 19.47 |
| TraesCS7B01G248200.1 | Wheat | mitochondrion | 14.02 | 18.6 |
| TraesCS6B01G224800.2 | Wheat | plastid | 11.33 | 16.89 |
| TraesCS6B01G159200.1 | Wheat | plastid | 10.93 | 16.42 |
Protein Annotations
| MapMan:17.1.2.2.3.4 | Gene3D:2.40.30.10 | Gene3D:3.30.230.10 | Gene3D:3.30.70.240 | Gene3D:3.30.70.870 | Gene3D:3.40.50.300 |
| Gene3D:3.90.1430.10 | InterPro:EFG_III/V | InterPro:EFG_V-like | InterPro:EFTu-like_2 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | InterPro:IPR000795 |
| InterPro:IPR014721 | InterPro:P-loop_NTPase | PFAM:PF00009 | PFAM:PF00679 | PFAM:PF03144 | PFAM:PF14492 |
| PRINTS:PR00315 | PFscan:PS51722 | PANTHER:PTHR42908 | PANTHER:PTHR42908:SF12 | InterPro:Ribosomal_S5_D2-typ_fold | InterPro:Ribosomal_S5_D2-typ_fold_subgr |
| SMART:SM00838 | SUPFAM:SSF50447 | SUPFAM:SSF52540 | SUPFAM:SSF54211 | SUPFAM:SSF54980 | InterPro:TF_GTP-bd_dom |
| EnsemblPlantsGene:TraesCS1B01G062700 | EnsemblPlants:TraesCS1B01G062700.1 | InterPro:Transl_B-barrel_sf | TIGR:cd01681 | TIGR:cd04096 | TIGR:cd16268 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1B:+:47604968..47608120
Molecular Weight (calculated)
110344.0 Da
IEP (calculated)
6.917
GRAVY (calculated)
-0.155
Length
1006 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVVAAAGDPG RVRNTCIMAH VDHGKTTLAD HLVAYGGGGL LNPSMAGKAR FMDHLREEQE RAITMKSASV LLRHRDGTRV HLIDSPGHAD FCSEVSAAAR
0101: VADSALIVVD AVDGLGVQTH AALRKAFAER LRPCLVLNKL DRLITDLRLD PGEAYERLHR IVAGANSVYS TLRSGSYFSL LDGPAPAQQA DDGEDTFVPQ
0201: KGNVVFGCAR DGWGFRIQDF AAVMAMGRPG QASKLVGWLW GAYYWDKEKK KAMPLANGMK QQPMFVEFVL KRLWKVYDHG MKVDGASWLR DHLVQTFNLK
0301: VSERELQSKD RPKAVLEAVM RAWLPLAETV MTMIVECTPD PVDAQRFRAL ALMPERELPT WVSAEHAGII AEAEKVRRCV VACSASSSAP VVVFVSKMFV
0401: VKHKDLPPTL NHSQEAAGEP EECFLAFARV FSGVLHAGQK VFVLSPMYDP VKGDTTGKHL KEVEVQQLYE MLGEGLRPVA SVGTGNVAAI KGLGEHIMKT
0501: ATLSSTRNCW PFASMAFQVS PILKVAVEPA NVADLAAFRE GLSLLNRADP LVEYSISEKG EHVLAAAGKV HLEHCVKNLR ERFAKVELNV SEPLVSFKET
0601: IQGEGVGLID SLKDTHGYVE RIAPDGRFAV RVKVVRLPDA LVKVLEENEE LLSRTIKGQT ARSDGAIGSQ CPHDDDGRSM AVLRQDMLSA VESELEALSP
0701: RADEVKLESY RKTLLGYLHK IWALGPSQVG PNLLLMPGVK LSSGLTTIQN GREGILVRGR CHVSKKLGFV SVSDDDAEIS NGIIDDSEPS TDVPDPEALR
0801: NIIISGFQEV TNAGPLCDEP MWGLAFIVEP YIFSGSPDSV NCSYQHKAAV REACRAAVLQ SKPRLVEPMY FCEVTTPIER LGSVYSVLGD CRAKVQEAEM
0901: QLETFLYMVH AHLPVAESSE FSEKLWNGSS GAATARLTFS HWEAIPQDPF FVPKTKEEIE EFGDGSNMGP NLAKKLIDSV RRRKGLHVDD KVVKHGTKQR
1001: TRAKKV
0101: VADSALIVVD AVDGLGVQTH AALRKAFAER LRPCLVLNKL DRLITDLRLD PGEAYERLHR IVAGANSVYS TLRSGSYFSL LDGPAPAQQA DDGEDTFVPQ
0201: KGNVVFGCAR DGWGFRIQDF AAVMAMGRPG QASKLVGWLW GAYYWDKEKK KAMPLANGMK QQPMFVEFVL KRLWKVYDHG MKVDGASWLR DHLVQTFNLK
0301: VSERELQSKD RPKAVLEAVM RAWLPLAETV MTMIVECTPD PVDAQRFRAL ALMPERELPT WVSAEHAGII AEAEKVRRCV VACSASSSAP VVVFVSKMFV
0401: VKHKDLPPTL NHSQEAAGEP EECFLAFARV FSGVLHAGQK VFVLSPMYDP VKGDTTGKHL KEVEVQQLYE MLGEGLRPVA SVGTGNVAAI KGLGEHIMKT
0501: ATLSSTRNCW PFASMAFQVS PILKVAVEPA NVADLAAFRE GLSLLNRADP LVEYSISEKG EHVLAAAGKV HLEHCVKNLR ERFAKVELNV SEPLVSFKET
0601: IQGEGVGLID SLKDTHGYVE RIAPDGRFAV RVKVVRLPDA LVKVLEENEE LLSRTIKGQT ARSDGAIGSQ CPHDDDGRSM AVLRQDMLSA VESELEALSP
0701: RADEVKLESY RKTLLGYLHK IWALGPSQVG PNLLLMPGVK LSSGLTTIQN GREGILVRGR CHVSKKLGFV SVSDDDAEIS NGIIDDSEPS TDVPDPEALR
0801: NIIISGFQEV TNAGPLCDEP MWGLAFIVEP YIFSGSPDSV NCSYQHKAAV REACRAAVLQ SKPRLVEPMY FCEVTTPIER LGSVYSVLGD CRAKVQEAEM
0901: QLETFLYMVH AHLPVAESSE FSEKLWNGSS GAATARLTFS HWEAIPQDPF FVPKTKEEIE EFGDGSNMGP NLAKKLIDSV RRRKGLHVDD KVVKHGTKQR
1001: TRAKKV
0001: MDESEGRKVR NICILAHVDH GKTTLADHLI ASSGGGVLHP RLAGKLRFMD YLDEEQRRAI TMKSSSISLK YKDYSLNLID SPGHMDFCSE VSTAARLSDG
0101: ALVLVDAVEG VHIQTHAVLR QAWIEKLTPC LVLNKIDRLI FELRLSPMEA YTRLIRIVHE VNGIVSAYKS EKYLSDVDSI LASPSGELSA ESLELLEDDE
0201: EVTFQPQKGN VVFVCALDGW GFGIAEFANF YASKLGASAT ALQKSLWGPR YYIPKTKMIV GKKNLSAGSK AKPMFVQFVL EPLWQVYEAA LDPGGDKAVL
0301: EKVIKSFNLS IPPRELQNKD PKNVLQSVMS RWLPLSDAVL SMAVKHLPDP IAAQAYRIPR LVPERKIIGG DDVDSSVLAE AELVRKSIEA CDSSSDSPCV
0401: VFVSKMFAIP MKMIPQDGNH RERMNGLNDD DSKSESDECF LAFARIFSGV LRAGQRVFVI TALYDPLKGE SSHKYIQEAE LHSLYLMMGQ GLTPVTEVKA
0501: GNVVAIRGLG PYISKSATLS STRNCWPLAS MEFQVSPTLR VAIEPSDPAD MSALMKGLRL LNRADPFVEI TVSARGEHVL AAAGEVHLER CVKDLKERFA
0601: KVNLEVSPPL VSYRETIEGD GSNLLESLRS LSLNSSDYIE KRTPNGRCII RVHVMKLPHA LTKLLDENTE LLGDIIGGKG SHSVKILESQ KPSLGENVDP
0701: IEELKKQLVE AGVSSSSETE KDREKCKTEW SKLLKRIWAL GPREKGPNIL FAPDGKRIAE DGSMLVRGSP HVSQRLGFTE DSTETPAEVS ETALYSEALT
0801: LESSIVSGFQ LATASGPLCD EPMWGLAFTI ESHLAPAEDV ETDKPENFGI FTGQVMTAVK DACRAAVLQT NPRIVEAMYF CELNTAPEYL GPMYAVLSRR
0901: RARILKEEMQ EGSSLFTVHA YVPVSESFGF ADELRKGTSG GASALMVLSH WEMLEEDPFF VPKTEEEIEE FGDGASVLPN TARKLINAVR RRKGLHVEEK
1001: VVQYATKQRT LARKV
0101: ALVLVDAVEG VHIQTHAVLR QAWIEKLTPC LVLNKIDRLI FELRLSPMEA YTRLIRIVHE VNGIVSAYKS EKYLSDVDSI LASPSGELSA ESLELLEDDE
0201: EVTFQPQKGN VVFVCALDGW GFGIAEFANF YASKLGASAT ALQKSLWGPR YYIPKTKMIV GKKNLSAGSK AKPMFVQFVL EPLWQVYEAA LDPGGDKAVL
0301: EKVIKSFNLS IPPRELQNKD PKNVLQSVMS RWLPLSDAVL SMAVKHLPDP IAAQAYRIPR LVPERKIIGG DDVDSSVLAE AELVRKSIEA CDSSSDSPCV
0401: VFVSKMFAIP MKMIPQDGNH RERMNGLNDD DSKSESDECF LAFARIFSGV LRAGQRVFVI TALYDPLKGE SSHKYIQEAE LHSLYLMMGQ GLTPVTEVKA
0501: GNVVAIRGLG PYISKSATLS STRNCWPLAS MEFQVSPTLR VAIEPSDPAD MSALMKGLRL LNRADPFVEI TVSARGEHVL AAAGEVHLER CVKDLKERFA
0601: KVNLEVSPPL VSYRETIEGD GSNLLESLRS LSLNSSDYIE KRTPNGRCII RVHVMKLPHA LTKLLDENTE LLGDIIGGKG SHSVKILESQ KPSLGENVDP
0701: IEELKKQLVE AGVSSSSETE KDREKCKTEW SKLLKRIWAL GPREKGPNIL FAPDGKRIAE DGSMLVRGSP HVSQRLGFTE DSTETPAEVS ETALYSEALT
0801: LESSIVSGFQ LATASGPLCD EPMWGLAFTI ESHLAPAEDV ETDKPENFGI FTGQVMTAVK DACRAAVLQT NPRIVEAMYF CELNTAPEYL GPMYAVLSRR
0901: RARILKEEMQ EGSSLFTVHA YVPVSESFGF ADELRKGTSG GASALMVLSH WEMLEEDPFF VPKTEEEIEE FGDGASVLPN TARKLINAVR RRKGLHVEEK
1001: VVQYATKQRT LARKV
Arabidopsis Description
Ribosomal protein S5/Elongation factor G/III/V family protein [Source:UniProtKB/TrEMBL;Acc:F4J2T9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.