Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY10337 Canola cytosol 70.1 76.16
Bra033543.1-P Field mustard cytosol 98.45 55.71
CDY10688 Canola cytosol 93.01 54.93
KRH40894 Soybean cytosol 36.12 53.76
AT3G22980.2 Thale cress cytosol 91.07 46.21
PGSC0003DMT400007735 Potato cytosol 75.73 38.12
Solyc11g071770.1.1 Tomato cytosol 75.53 37.99
VIT_04s0044g01790.t01 Wine grape cytosol 74.17 37.09
KRG94823 Soybean cytosol 70.87 35.71
GSMUA_Achr2P17400_001 Banana cytosol 49.51 30.95
CDY49975 Canola cytosol 23.69 30.58
Os03t0650700-01 Rice cytosol 60.58 30.32
TraesCS5D01G380500.1 Wheat cytosol 61.16 30.14
TraesCS5B01G373200.1 Wheat cytosol 61.16 30.14
TraesCS5A01G370800.1 Wheat cytosol 61.16 30.14
Zm00001d033505_P001 Maize cytosol 60.39 29.79
KXG37923 Sorghum cytosol 60.39 29.76
Os02t0543300-00 Rice mitochondrion 54.17 27.76
HORVU5Hr1G092260.1 Barley nucleus, plastid 61.16 27.02
TraesCS1D01G049600.1 Wheat cytosol 49.32 26.51
TraesCS1B01G062700.1 Wheat cytosol 49.51 25.35
KXG30393 Sorghum nucleus 43.3 25.28
TraesCS1A01G048300.1 Wheat mitochondrion, nucleus, plastid 48.54 25.25
CDY40423 Canola cytosol 33.98 22.24
CDX90241 Canola cytosol, extracellular 32.23 20.99
CDY24982 Canola endoplasmic reticulum, vacuole 32.23 19.81
CDY32072 Canola cytosol 22.91 18.24
CDY05533 Canola cytosol 23.11 18.22
CDY15566 Canola cytosol 27.77 17.17
CDY69302 Canola cytosol 10.1 16.3
HORVU1Hr1G009320.1 Barley nucleus 26.41 15.21
CDY70516 Canola cytosol 14.95 15.13
CDY09982 Canola nucleus 27.77 14.46
CDY46917 Canola plastid 19.42 12.9
CDY31838 Canola plastid 19.42 12.9
CDY71233 Canola mitochondrion, nucleus 12.82 11.83
CDY70689 Canola cytosol 12.23 11.65
CDX84803 Canola mitochondrion 13.98 11.54
CDY54484 Canola mitochondrion 14.95 11.51
CDY19061 Canola mitochondrion 14.95 11.51
CDY44781 Canola plastid 14.95 11.41
CDX67441 Canola plastid 14.95 11.22
CDY65319 Canola endoplasmic reticulum, plastid, vacuole 14.95 11.19
CDY40739 Canola plastid 14.76 11.11
CDX74705 Canola plastid 16.12 10.99
CDY18957 Canola plastid 16.12 10.98
CDY65992 Canola plastid 13.98 10.68
CDX91105 Canola plastid 13.79 10.53
CDY09816 Canola plastid 13.79 10.52
CDX85635 Canola plastid 13.79 10.03
CDX78349 Canola cytosol 0.78 1.73
CDY70526 Canola nucleus 0.19 1.18
CDY49974 Canola nucleus 0.19 1.18
CDY32225 Canola nucleus 0.78 1.13
CDY23967 Canola cytosol 0.19 0.86
CDY54261 Canola nucleus 0.19 0.43
Protein Annotations
Gene3D:2.40.30.10Gene3D:3.30.70.870Gene3D:3.40.50.300MapMan:35.1GO:A0A078H497UniProt:A0A078H497
EnsemblPlants:CDY32224ProteinID:CDY32224ProteinID:CDY32224.1InterPro:EFG_III/VGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0003924GO:GO:0005488GO:GO:0005525GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00051658001
InterPro:IPR000795InterPro:P-loop_NTPasePFAM:PF00009PRINTS:PR00315PFscan:PS51722PANTHER:PTHR42908
PANTHER:PTHR42908:SF12SUPFAM:SSF50447SUPFAM:SSF52540SUPFAM:SSF54980InterPro:TF_GTP-bd_domInterPro:Transl_B-barrel_sf
UniParc:UPI0004EEE8E0SEG:seg::::
Description
BnaA01g17600DBnaA01g17600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H497]
Coordinates
chrLK032290:+:106165..107913
Molecular Weight (calculated)
57153.5 Da
IEP (calculated)
4.759
GRAVY (calculated)
-0.114
Length
515 amino acids
Sequence
(BLAST)
001: MDYLDEEQRR AITMKSSSIS LGYKDYSLNL LDSPGHMDFC SEVSTAARLS DGALVLVDAV EGVHIQTHAV LRQAWIEKLT PCLVLNKIDR LICELRLSPM
101: EAYTRLIRIV HEVNGIVSAY KSEKYLSDVD SILASPSGEI TDESLELLED DEEITFQPQK GNVVFVCALD GWGFGVSEFA NFYASRLGAN ADTLQKSLWG
201: PRYYIPKTKM IVGKKSLSAG SKTNPMFVEF VLEPLWEDPK NLRRSVMSRW LPLSDAVLSM AVKHLPDPIS AQAYRIPRLV PERKVIGGND VDSSVLAEAE
301: LVRRSIEACD SSPDSPCVVF VSKMFAMPMK MIPQGGDHRE RMNGLNDDDS NSESDECFLA FARIFSGVLR AGQRVFVISS LYDPLKGESY IQEAQLHSIY
401: LMMGQGLKPV NEVSPTLRVA IEPSDPSDMS ALMKGLRLLN RADPFVEITV SARGEHVLAA AGEVHLERCI KDLSDRFARV NIEVSSPLVS YRETVEGDGS
501: NLLESLTSLS LNTWD
Best Arabidopsis Sequence Match ( AT3G22980.1 )
(BLAST)
0001: MDESEGRKVR NICILAHVDH GKTTLADHLI ASSGGGVLHP RLAGKLRFMD YLDEEQRRAI TMKSSSISLK YKDYSLNLID SPGHMDFCSE VSTAARLSDG
0101: ALVLVDAVEG VHIQTHAVLR QAWIEKLTPC LVLNKIDRLI FELRLSPMEA YTRLIRIVHE VNGIVSAYKS EKYLSDVDSI LASPSGELSA ESLELLEDDE
0201: EVTFQPQKGN VVFVCALDGW GFGIAEFANF YASKLGASAT ALQKSLWGPR YYIPKTKMIV GKKNLSAGSK AKPMFVQFVL EPLWQVYEAA LDPGGDKAVL
0301: EKVIKSFNLS IPPRELQNKD PKNVLQSVMS RWLPLSDAVL SMAVKHLPDP IAAQAYRIPR LVPERKIIGG DDVDSSVLAE AELVRKSIEA CDSSSDSPCV
0401: VFVSKMFAIP MKMIPQDGNH RERMNGLNDD DSKSESDECF LAFARIFSGV LRAGQRVFVI TALYDPLKGE SSHKYIQEAE LHSLYLMMGQ GLTPVTEVKA
0501: GNVVAIRGLG PYISKSATLS STRNCWPLAS MEFQVSPTLR VAIEPSDPAD MSALMKGLRL LNRADPFVEI TVSARGEHVL AAAGEVHLER CVKDLKERFA
0601: KVNLEVSPPL VSYRETIEGD GSNLLESLRS LSLNSSDYIE KRTPNGRCII RVHVMKLPHA LTKLLDENTE LLGDIIGGKG SHSVKILESQ KPSLGENVDP
0701: IEELKKQLVE AGVSSSSETE KDREKCKTEW SKLLKRIWAL GPREKGPNIL FAPDGKRIAE DGSMLVRGSP HVSQRLGFTE DSTETPAEVS ETALYSEALT
0801: LESSIVSGFQ LATASGPLCD EPMWGLAFTI ESHLAPAEDV ETDKPENFGI FTGQVMTAVK DACRAAVLQT NPRIVEAMYF CELNTAPEYL GPMYAVLSRR
0901: RARILKEEMQ EGSSLFTVHA YVPVSESFGF ADELRKGTSG GASALMVLSH WEMLEEDPFF VPKTEEEIEE FGDGASVLPN TARKLINAVR RRKGLHVEEK
1001: VVQYATKQRT LARKV
Arabidopsis Description
Ribosomal protein S5/Elongation factor G/III/V family protein [Source:UniProtKB/TrEMBL;Acc:F4J2T9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.