Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY10337 | Canola | cytosol | 70.1 | 76.16 |
Bra033543.1-P | Field mustard | cytosol | 98.45 | 55.71 |
CDY10688 | Canola | cytosol | 93.01 | 54.93 |
KRH40894 | Soybean | cytosol | 36.12 | 53.76 |
AT3G22980.2 | Thale cress | cytosol | 91.07 | 46.21 |
PGSC0003DMT400007735 | Potato | cytosol | 75.73 | 38.12 |
Solyc11g071770.1.1 | Tomato | cytosol | 75.53 | 37.99 |
VIT_04s0044g01790.t01 | Wine grape | cytosol | 74.17 | 37.09 |
KRG94823 | Soybean | cytosol | 70.87 | 35.71 |
GSMUA_Achr2P17400_001 | Banana | cytosol | 49.51 | 30.95 |
CDY49975 | Canola | cytosol | 23.69 | 30.58 |
Os03t0650700-01 | Rice | cytosol | 60.58 | 30.32 |
TraesCS5D01G380500.1 | Wheat | cytosol | 61.16 | 30.14 |
TraesCS5B01G373200.1 | Wheat | cytosol | 61.16 | 30.14 |
TraesCS5A01G370800.1 | Wheat | cytosol | 61.16 | 30.14 |
Zm00001d033505_P001 | Maize | cytosol | 60.39 | 29.79 |
KXG37923 | Sorghum | cytosol | 60.39 | 29.76 |
Os02t0543300-00 | Rice | mitochondrion | 54.17 | 27.76 |
HORVU5Hr1G092260.1 | Barley | nucleus, plastid | 61.16 | 27.02 |
TraesCS1D01G049600.1 | Wheat | cytosol | 49.32 | 26.51 |
TraesCS1B01G062700.1 | Wheat | cytosol | 49.51 | 25.35 |
KXG30393 | Sorghum | nucleus | 43.3 | 25.28 |
TraesCS1A01G048300.1 | Wheat | mitochondrion, nucleus, plastid | 48.54 | 25.25 |
CDY40423 | Canola | cytosol | 33.98 | 22.24 |
CDX90241 | Canola | cytosol, extracellular | 32.23 | 20.99 |
CDY24982 | Canola | endoplasmic reticulum, vacuole | 32.23 | 19.81 |
CDY32072 | Canola | cytosol | 22.91 | 18.24 |
CDY05533 | Canola | cytosol | 23.11 | 18.22 |
CDY15566 | Canola | cytosol | 27.77 | 17.17 |
CDY69302 | Canola | cytosol | 10.1 | 16.3 |
HORVU1Hr1G009320.1 | Barley | nucleus | 26.41 | 15.21 |
CDY70516 | Canola | cytosol | 14.95 | 15.13 |
CDY09982 | Canola | nucleus | 27.77 | 14.46 |
CDY46917 | Canola | plastid | 19.42 | 12.9 |
CDY31838 | Canola | plastid | 19.42 | 12.9 |
CDY71233 | Canola | mitochondrion, nucleus | 12.82 | 11.83 |
CDY70689 | Canola | cytosol | 12.23 | 11.65 |
CDX84803 | Canola | mitochondrion | 13.98 | 11.54 |
CDY54484 | Canola | mitochondrion | 14.95 | 11.51 |
CDY19061 | Canola | mitochondrion | 14.95 | 11.51 |
CDY44781 | Canola | plastid | 14.95 | 11.41 |
CDX67441 | Canola | plastid | 14.95 | 11.22 |
CDY65319 | Canola | endoplasmic reticulum, plastid, vacuole | 14.95 | 11.19 |
CDY40739 | Canola | plastid | 14.76 | 11.11 |
CDX74705 | Canola | plastid | 16.12 | 10.99 |
CDY18957 | Canola | plastid | 16.12 | 10.98 |
CDY65992 | Canola | plastid | 13.98 | 10.68 |
CDX91105 | Canola | plastid | 13.79 | 10.53 |
CDY09816 | Canola | plastid | 13.79 | 10.52 |
CDX85635 | Canola | plastid | 13.79 | 10.03 |
CDX78349 | Canola | cytosol | 0.78 | 1.73 |
CDY70526 | Canola | nucleus | 0.19 | 1.18 |
CDY49974 | Canola | nucleus | 0.19 | 1.18 |
CDY32225 | Canola | nucleus | 0.78 | 1.13 |
CDY23967 | Canola | cytosol | 0.19 | 0.86 |
CDY54261 | Canola | nucleus | 0.19 | 0.43 |
Protein Annotations
Gene3D:2.40.30.10 | Gene3D:3.30.70.870 | Gene3D:3.40.50.300 | MapMan:35.1 | GO:A0A078H497 | UniProt:A0A078H497 |
EnsemblPlants:CDY32224 | ProteinID:CDY32224 | ProteinID:CDY32224.1 | InterPro:EFG_III/V | GO:GO:0000166 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00051658001 |
InterPro:IPR000795 | InterPro:P-loop_NTPase | PFAM:PF00009 | PRINTS:PR00315 | PFscan:PS51722 | PANTHER:PTHR42908 |
PANTHER:PTHR42908:SF12 | SUPFAM:SSF50447 | SUPFAM:SSF52540 | SUPFAM:SSF54980 | InterPro:TF_GTP-bd_dom | InterPro:Transl_B-barrel_sf |
UniParc:UPI0004EEE8E0 | SEG:seg | : | : | : | : |
Description
BnaA01g17600DBnaA01g17600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H497]
Coordinates
chrLK032290:+:106165..107913
Molecular Weight (calculated)
57153.5 Da
IEP (calculated)
4.759
GRAVY (calculated)
-0.114
Length
515 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYLDEEQRR AITMKSSSIS LGYKDYSLNL LDSPGHMDFC SEVSTAARLS DGALVLVDAV EGVHIQTHAV LRQAWIEKLT PCLVLNKIDR LICELRLSPM
101: EAYTRLIRIV HEVNGIVSAY KSEKYLSDVD SILASPSGEI TDESLELLED DEEITFQPQK GNVVFVCALD GWGFGVSEFA NFYASRLGAN ADTLQKSLWG
201: PRYYIPKTKM IVGKKSLSAG SKTNPMFVEF VLEPLWEDPK NLRRSVMSRW LPLSDAVLSM AVKHLPDPIS AQAYRIPRLV PERKVIGGND VDSSVLAEAE
301: LVRRSIEACD SSPDSPCVVF VSKMFAMPMK MIPQGGDHRE RMNGLNDDDS NSESDECFLA FARIFSGVLR AGQRVFVISS LYDPLKGESY IQEAQLHSIY
401: LMMGQGLKPV NEVSPTLRVA IEPSDPSDMS ALMKGLRLLN RADPFVEITV SARGEHVLAA AGEVHLERCI KDLSDRFARV NIEVSSPLVS YRETVEGDGS
501: NLLESLTSLS LNTWD
101: EAYTRLIRIV HEVNGIVSAY KSEKYLSDVD SILASPSGEI TDESLELLED DEEITFQPQK GNVVFVCALD GWGFGVSEFA NFYASRLGAN ADTLQKSLWG
201: PRYYIPKTKM IVGKKSLSAG SKTNPMFVEF VLEPLWEDPK NLRRSVMSRW LPLSDAVLSM AVKHLPDPIS AQAYRIPRLV PERKVIGGND VDSSVLAEAE
301: LVRRSIEACD SSPDSPCVVF VSKMFAMPMK MIPQGGDHRE RMNGLNDDDS NSESDECFLA FARIFSGVLR AGQRVFVISS LYDPLKGESY IQEAQLHSIY
401: LMMGQGLKPV NEVSPTLRVA IEPSDPSDMS ALMKGLRLLN RADPFVEITV SARGEHVLAA AGEVHLERCI KDLSDRFARV NIEVSSPLVS YRETVEGDGS
501: NLLESLTSLS LNTWD
0001: MDESEGRKVR NICILAHVDH GKTTLADHLI ASSGGGVLHP RLAGKLRFMD YLDEEQRRAI TMKSSSISLK YKDYSLNLID SPGHMDFCSE VSTAARLSDG
0101: ALVLVDAVEG VHIQTHAVLR QAWIEKLTPC LVLNKIDRLI FELRLSPMEA YTRLIRIVHE VNGIVSAYKS EKYLSDVDSI LASPSGELSA ESLELLEDDE
0201: EVTFQPQKGN VVFVCALDGW GFGIAEFANF YASKLGASAT ALQKSLWGPR YYIPKTKMIV GKKNLSAGSK AKPMFVQFVL EPLWQVYEAA LDPGGDKAVL
0301: EKVIKSFNLS IPPRELQNKD PKNVLQSVMS RWLPLSDAVL SMAVKHLPDP IAAQAYRIPR LVPERKIIGG DDVDSSVLAE AELVRKSIEA CDSSSDSPCV
0401: VFVSKMFAIP MKMIPQDGNH RERMNGLNDD DSKSESDECF LAFARIFSGV LRAGQRVFVI TALYDPLKGE SSHKYIQEAE LHSLYLMMGQ GLTPVTEVKA
0501: GNVVAIRGLG PYISKSATLS STRNCWPLAS MEFQVSPTLR VAIEPSDPAD MSALMKGLRL LNRADPFVEI TVSARGEHVL AAAGEVHLER CVKDLKERFA
0601: KVNLEVSPPL VSYRETIEGD GSNLLESLRS LSLNSSDYIE KRTPNGRCII RVHVMKLPHA LTKLLDENTE LLGDIIGGKG SHSVKILESQ KPSLGENVDP
0701: IEELKKQLVE AGVSSSSETE KDREKCKTEW SKLLKRIWAL GPREKGPNIL FAPDGKRIAE DGSMLVRGSP HVSQRLGFTE DSTETPAEVS ETALYSEALT
0801: LESSIVSGFQ LATASGPLCD EPMWGLAFTI ESHLAPAEDV ETDKPENFGI FTGQVMTAVK DACRAAVLQT NPRIVEAMYF CELNTAPEYL GPMYAVLSRR
0901: RARILKEEMQ EGSSLFTVHA YVPVSESFGF ADELRKGTSG GASALMVLSH WEMLEEDPFF VPKTEEEIEE FGDGASVLPN TARKLINAVR RRKGLHVEEK
1001: VVQYATKQRT LARKV
0101: ALVLVDAVEG VHIQTHAVLR QAWIEKLTPC LVLNKIDRLI FELRLSPMEA YTRLIRIVHE VNGIVSAYKS EKYLSDVDSI LASPSGELSA ESLELLEDDE
0201: EVTFQPQKGN VVFVCALDGW GFGIAEFANF YASKLGASAT ALQKSLWGPR YYIPKTKMIV GKKNLSAGSK AKPMFVQFVL EPLWQVYEAA LDPGGDKAVL
0301: EKVIKSFNLS IPPRELQNKD PKNVLQSVMS RWLPLSDAVL SMAVKHLPDP IAAQAYRIPR LVPERKIIGG DDVDSSVLAE AELVRKSIEA CDSSSDSPCV
0401: VFVSKMFAIP MKMIPQDGNH RERMNGLNDD DSKSESDECF LAFARIFSGV LRAGQRVFVI TALYDPLKGE SSHKYIQEAE LHSLYLMMGQ GLTPVTEVKA
0501: GNVVAIRGLG PYISKSATLS STRNCWPLAS MEFQVSPTLR VAIEPSDPAD MSALMKGLRL LNRADPFVEI TVSARGEHVL AAAGEVHLER CVKDLKERFA
0601: KVNLEVSPPL VSYRETIEGD GSNLLESLRS LSLNSSDYIE KRTPNGRCII RVHVMKLPHA LTKLLDENTE LLGDIIGGKG SHSVKILESQ KPSLGENVDP
0701: IEELKKQLVE AGVSSSSETE KDREKCKTEW SKLLKRIWAL GPREKGPNIL FAPDGKRIAE DGSMLVRGSP HVSQRLGFTE DSTETPAEVS ETALYSEALT
0801: LESSIVSGFQ LATASGPLCD EPMWGLAFTI ESHLAPAEDV ETDKPENFGI FTGQVMTAVK DACRAAVLQT NPRIVEAMYF CELNTAPEYL GPMYAVLSRR
0901: RARILKEEMQ EGSSLFTVHA YVPVSESFGF ADELRKGTSG GASALMVLSH WEMLEEDPFF VPKTEEEIEE FGDGASVLPN TARKLINAVR RRKGLHVEEK
1001: VVQYATKQRT LARKV
Arabidopsis Description
Ribosomal protein S5/Elongation factor G/III/V family protein [Source:UniProtKB/TrEMBL;Acc:F4J2T9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.