CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004884.1-P	Field mustard	plastid	99.6	99.74
CDX74705	Canola	plastid	99.47	99.6
AT2G45030.1	Thale cress	mitochondrion	92.59	92.84
AT1G45332.1	Thale cress	mitochondrion	92.46	92.71
GSMUA_Achr10P...	Banana	cytosol	77.78	84.85
KRG88956	Soybean	mitochondrion	77.78	84.36
VIT_15s0021g02450.t01	Wine grape	mitochondrion, plastid	82.8	83.91
Solyc01g090690.2.1	Tomato	plastid	81.48	81.05
PGSC0003DMT400066962	Potato	mitochondrion	80.95	80.53
HORVU7Hr1G082910.2	Barley	mitochondrion	79.63	79.42
TraesCS7B01G248200.1	Wheat	mitochondrion	79.5	79.29
Os03t0565500-01	Rice	mitochondrion	79.37	79.26
Zm00001d034826_P001	Maize	mitochondrion, plastid	78.7	79.02
EER90530	Sorghum	mitochondrion, plastid	78.97	78.76
TraesCS7D01G344300.4	Wheat	mitochondrion	76.45	74.1
TraesCS7A01G336600.4	Wheat	mitochondrion	76.45	74.1
CDY46917	Canola	plastid	43.25	42.19
CDY31838	Canola	plastid	43.12	42.06
CDY49975	Canola	cytosol	11.11	21.05
CDY44781	Canola	plastid	17.99	20.15
CDY10337	Canola	cytosol	12.57	20.04
CDY40739	Canola	plastid	17.99	19.88
CDY65992	Canola	plastid	17.72	19.88
CDY09816	Canola	plastid	17.72	19.85
CDX91105	Canola	plastid	17.46	19.58
CDX90241	Canola	cytosol, extracellular	20.24	19.34
CDX85635	Canola	plastid	17.86	19.07
CDY40423	Canola	cytosol	19.84	19.06
CDY19061	Canola	mitochondrion	16.8	18.98
CDY24982	Canola	endoplasmic reticulum, vacuole	21.03	18.97
CDX84803	Canola	mitochondrion	15.61	18.91
CDY54484	Canola	mitochondrion	16.53	18.68
CDY65319	Canola	endoplasmic reticulum, plastid, vacuole	16.01	17.59
CDX67441	Canola	plastid	15.87	17.49
CDY70516	Canola	cytosol	11.51	17.09
CDY10688	Canola	cytosol	19.18	16.63
CDY32072	Canola	cytosol	13.89	16.23
CDY15566	Canola	cytosol	17.86	16.21
CDY32224	Canola	cytosol	10.98	16.12
CDY05533	Canola	cytosol	13.89	16.08
CDY09982	Canola	nucleus	20.11	15.37
CDY70689	Canola	cytosol	10.98	15.34
CDY71233	Canola	mitochondrion, nucleus	11.11	15.05
CDY69302	Canola	cytosol	6.35	15.05
CDY54261	Canola	nucleus	4.1	13.48
CDX78349	Canola	cytosol	3.97	12.99
CDY70526	Canola	nucleus	1.32	11.76
CDY49974	Canola	nucleus	1.32	11.76
CDY32225	Canola	nucleus	5.16	11.02
CDY23967	Canola	cytosol	1.06	6.9

Protein Annotations

MapMan:17.7.4.3	Gene3D:2.40.30.10	Gene3D:3.30.230.10	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300
GO:A0A078G1T8	UniProt:A0A078G1T8	EnsemblPlants:CDY18957	ProteinID:CDY18957	ProteinID:CDY18957.1	InterPro:EFG_III
InterPro:EFG_III/V	InterPro:EFG_V	InterPro:EFG_V-like	InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003746	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006412	GO:GO:0006414	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0070125	EnsemblPlantsGene:GSBRNA2T00006177001	InterPro:G_TR_CS
InterPro:IPR000795	InterPro:IPR014721	HAMAP:MF_00054_B	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF00679
PFAM:PF03144	PFAM:PF03764	PFAM:PF14492	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722
PANTHER:PTHR43636	PANTHER:PTHR43636:SF2	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	SMART:SM00838	SMART:SM00889
SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom
TIGRFAMs:TIGR00231	TIGRFAMs:TIGR00484	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EFG/EF2	InterPro:Transl_elong_EFG/EF2_IV	UniParc:UPI0004EEDBBD
SEG:seg	:	:	:	:	:

Description

BnaC04g03930DElongation factor G, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A078G1T8]

Coordinates

chrLK032090:-:660663..665855

Molecular Weight (calculated)

83497.7 Da

IEP (calculated)

6.565

GRAVY (calculated)

-0.304

Length

756 amino acids

Sequence
(BLAST)

001: MPRFPPSPSP NLLQRLFSSS SNKRSSSSPT AALLSGDFHL RRFSSGNAAR AAKGEKEPWW KESMNKVRNI GISAHIDSGK TTLTERVLFY TGRIHEIHEV
101: RGRDGVGAKM DSMDLEREKG ITIQSAATYC TWKDYKVNII DTPGHVDFTI EVERALRVLD GAILVLCSVG GVQSQSITVD RQMRRYEVPR VAFINKLDRM
201: GADPWKVLSQ ARAKLRHHSA AVQMPIGLEE NFKGLIDLVH VKALFFHGSS GENVVAGDIP ADMEELVAEK RRELIETVSE VDDVLAEKFL NDEPVTAAEL
301: EEAIRRATIA QKFVPVFMGS AFKNKGVQPL LDGVVSYLPC PTEVNNYALD QDNEEAKVTL TGSPDGPLVA LAFKLEEGRF GQLTYLRIYE GVIKKGDFII
401: NVNTKKRIKV PRLVRMHSND MEDIQEAHAG EIVAVFGIDC ASGHTFTDGS VKYTMTSMSV PEPVMSLAVQ PVSKDSGGQF SKALQRFQKE DPTFRVGLDP
501: DSNQTIISGM GELHLDIYVE RMRREYKVDA TVGKPRVNFR ETITQRAEFD YLHKKQSGGA GQYGRVTGYV EPLSSDSKEK FEFENMIVGQ AIPSGFIPAI
601: EKGFKEAANS GSLIGHPVEN IRIVLTDGAS HAVDSSELAF KMAAIYAFRL CYTAAKPVIL EPVMLVELKV PTEFQGTVAG DLNKRKGIIV GNDQEGDDSV
701: IQAHVPLNNM FGYSTSLRSM TQGKGEFTME YKEHSAVSND VQTQLVNAHN ATKPTD

Best Arabidopsis Sequence Match ( AT2G45030.1 )
(BLAST)

001: MARFPTSPAP NLLLRLFSSN KRASSPTAAL LTGDFHLIRH FSAGTAARAV KDEKEPWWKE SMDKLRNIGI SAHIDSGKTT LTERVLFYTG RIHEIHEVRG
101: RDGVGAKMDS MDLEREKGIT IQSAATYCTW KDYKVNIIDT PGHVDFTIEV ERALRVLDGA ILVLCSVGGV QSQSITVDRQ MRRYEVPRVA FINKLDRMGA
201: DPWKVLNQAR AKLRHHSAAV QVPIGLEENF QGLIDLIHVK AYFFHGSSGE NVVAGDIPAD MEGLVGDKRR ELIETVSEVD DVLAEKFLND EPVSAAELEE
301: AIRRATIAQK FVPVFMGSAF KNKGVQPLLD GVVSFLPSPN EVNNYALDQN NNEERVTLTG SPDGPLVALA FKLEEGRFGQ LTYLRVYEGV IKKGDFIINV
401: NTGKRIKVPR LVRMHSNDME DIQEAHAGQI VAVFGIECAS GDTFTDGSVK YTMTSMNVPE PVMSLAVQPV SKDSGGQFSK ALNRFQKEDP TFRVGLDPES
501: GQTIISGMGE LHLDIYVERM RREYKVDATV GKPRVNFRET ITQRAEFDYL HKKQSGGAGQ YGRVTGYVEP LPPGSKEKFE FENMIVGQAI PSGFIPAIEK
601: GFKEAANSGS LIGHPVENLR IVLTDGASHA VDSSELAFKM AAIYAFRLCY TAARPVILEP VMLVELKVPT EFQGTVAGDI NKRKGIIVGN DQEGDDSVIT
701: ANVPLNNMFG YSTSLRSMTQ GKGEFTMEYK EHSAVSNEVQ AQLVNAYSAS KATE

Arabidopsis Description

MEFG2Elongation factor G-2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4IW10]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.