Factsheet for VIT_15s0021g02450.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	82.44	88.74
KRG88956	Soybean	mitochondrion	80.83	86.51
PGSC0003DMT400066962	Potato	mitochondrion	86.06	84.47
AT2G45030.1	Thale cress	mitochondrion	85.25	84.35
AT1G45332.1	Thale cress	mitochondrion	85.25	84.35
Solyc01g090690.2.1	Tomato	plastid	85.39	83.82
Bra004884.1-P	Field mustard	plastid	83.91	82.91
CDY18957	Canola	plastid	83.91	82.8
CDX74705	Canola	plastid	83.78	82.78
EER90530	Sorghum	mitochondrion, plastid	82.71	81.4
Os03t0565500-01	Rice	mitochondrion	82.57	81.37
Zm00001d034826_P001	Maize	mitochondrion, plastid	81.9	81.14
TraesCS7B01G248200.1	Wheat	mitochondrion	81.64	80.34
HORVU7Hr1G082910.2	Barley	mitochondrion	81.5	80.21
TraesCS7A01G336600.4	Wheat	mitochondrion	78.82	75.38
TraesCS7D01G344300.4	Wheat	mitochondrion	78.82	75.38
VIT_00s1286g00020.t01	Wine grape	cytosol, mitochondrion	12.47	44.08
VIT_00s0323g00080.t01	Wine grape	plastid	43.43	41.81
VIT_07s0031g03050.t01	Wine grape	plastid	17.96	19.71
VIT_19s0027g00760.t01	Wine grape	cytosol	21.98	19.23
VIT_12s0028g02640.t01	Wine grape	mitochondrion, plastid	17.29	19.2
VIT_08s0007g08290.t01	Wine grape	plastid	17.02	18.81
VIT_14s0108g00130.t01	Wine grape	mitochondrion, plastid	16.89	18.5
VIT_11s0118g00720.t01	Wine grape	nucleus	20.11	15.18
VIT_04s0044g01790.t01	Wine grape	cytosol	20.64	14.95

Protein Annotations

EntrezGene:100265034	wikigene:100265034	MapMan:17.7.4.3	Gene3D:2.40.30.10	Gene3D:3.30.230.10	Gene3D:3.30.70.240
Gene3D:3.30.70.870	Gene3D:3.40.50.300	EMBL:AM483925	ProteinID:CAN77652	ProteinID:CAN77652.1	ProteinID:CBI16604
ProteinID:CBI16604.3	UniProt:D7SLS6	InterPro:EFG_III	InterPro:EFG_III/V	InterPro:EFG_V	InterPro:EFG_V-like
InterPro:EFTu-like_2	EMBL:FN594952	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003746	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006412	GO:GO:0006414
GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0070125	InterPro:G_TR_CS	InterPro:IPR000795	InterPro:IPR014721	EntrezGene:LOC100265034
wikigene:LOC100265034	HAMAP:MF_00054_B	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF00679	PFAM:PF03144
PFAM:PF03764	PFAM:PF14492	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR43636
PANTHER:PTHR43636:SF2	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	SMART:SM00838	SMART:SM00889	SUPFAM:SSF50447
SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231
TIGRFAMs:TIGR00484	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EFG/EF2	InterPro:Transl_elong_EFG/EF2_IV	UniParc:UPI00015C9C6B	ArrayExpress:VIT_15s0021g02450
EnsemblPlantsGene:VIT_15s0021g02450	EnsemblPlants:VIT_15s0021g02450.t01	unigene:Vvi.9048	RefSeq:XP_002275162	RefSeq:XP_002275162.1	:

Description

Elongation factor G, mitochondrial [Source:UniProtKB/TrEMBL;Acc:D7SLS6]

Coordinates

chr15:-:13435847..13452444

Molecular Weight (calculated)

82435.6 Da

IEP (calculated)

6.624

GRAVY (calculated)

-0.262

Length

746 amino acids

Sequence
(BLAST)

001: MAPSARSPAI RLLYTLSSAL KTTSSPLLTG HRRTFSAGNP ARVEATWWKE SMERLRNIGI SAHIDSGKTT LTERILYYTG RIHEIHEVRG RDGVGAKMDS
101: MDLEREKGIT IQSAATYCTW KDYQVNIIDT PGHVDFTIEV ERALRVLDGA ILVLCSVGGV QSQSITVDRQ MRRYDVPRVA FINKLDRMGA DPWKVLSQAR
201: SKLRHHSAAV QVPIGLEDDF QGLVDLVQLK AYYFHGSNGE KVVAEEIPAN MEALVAEKRR ELIEMVSEVD DKLAEAFLTD EPISSASLEE AIRRATVAQK
301: FIPVFMGSAF KNKGVQPLLD GVLSYLPCPT EVSNYALDQN KNEEKVTISG TPVGPLVALA FKLEEGRFGQ LTYLRIYEGV IRKGDFIINV NTGKKIKVPR
401: LVRMHSNEME DIQEAHAGQI VAVFGVDCAS GDTFTDGSVR YTMTSMNVPE PVMSLAISPV SKDSGGQFSK ALNRFQREDP TFRVGLDAES GQTIISGMGE
501: LHLDIYVERI RREYKVDATV GRPRVNFRET VTKRAEFDYL HKKQTGGQGQ YGRVCGYVEP LPEGSTTKFE FENMIVGQAV PSNFIPAIEK GFKEAANSGS
601: LIGHPVENIR IVLTDGAAHA VDSSELAFKL AAIYAFRQCY TAAKPVILEP VMLVELKAPT EFQGTVTGDI NKRKGVIVGN DQDGDDSVIT AHVPLNNMFG
701: YSTSLRSMTQ GKGEFTMEYK EHSPVSQDVQ LQLVNTYKAN KAAENS

Best Arabidopsis Sequence Match ( AT2G45030.1 )
(BLAST)

001: MARFPTSPAP NLLLRLFSSN KRASSPTAAL LTGDFHLIRH FSAGTAARAV KDEKEPWWKE SMDKLRNIGI SAHIDSGKTT LTERVLFYTG RIHEIHEVRG
101: RDGVGAKMDS MDLEREKGIT IQSAATYCTW KDYKVNIIDT PGHVDFTIEV ERALRVLDGA ILVLCSVGGV QSQSITVDRQ MRRYEVPRVA FINKLDRMGA
201: DPWKVLNQAR AKLRHHSAAV QVPIGLEENF QGLIDLIHVK AYFFHGSSGE NVVAGDIPAD MEGLVGDKRR ELIETVSEVD DVLAEKFLND EPVSAAELEE
301: AIRRATIAQK FVPVFMGSAF KNKGVQPLLD GVVSFLPSPN EVNNYALDQN NNEERVTLTG SPDGPLVALA FKLEEGRFGQ LTYLRVYEGV IKKGDFIINV
401: NTGKRIKVPR LVRMHSNDME DIQEAHAGQI VAVFGIECAS GDTFTDGSVK YTMTSMNVPE PVMSLAVQPV SKDSGGQFSK ALNRFQKEDP TFRVGLDPES
501: GQTIISGMGE LHLDIYVERM RREYKVDATV GKPRVNFRET ITQRAEFDYL HKKQSGGAGQ YGRVTGYVEP LPPGSKEKFE FENMIVGQAI PSGFIPAIEK
601: GFKEAANSGS LIGHPVENLR IVLTDGASHA VDSSELAFKM AAIYAFRLCY TAARPVILEP VMLVELKVPT EFQGTVAGDI NKRKGIIVGN DQEGDDSVIT
701: ANVPLNNMFG YSTSLRSMTQ GKGEFTMEYK EHSAVSNEVQ AQLVNAYSAS KATE

Arabidopsis Description

MEFG2Elongation factor G-2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4IW10]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.