Factsheet for Zm00001d034826_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90530	Sorghum	mitochondrion, plastid	98.27	97.63
Os03t0565500-01	Rice	mitochondrion	93.63	93.13
TraesCS7B01G248200.1	Wheat	mitochondrion	91.1	90.5
HORVU7Hr1G082910.2	Barley	mitochondrion	90.97	90.37
GSMUA_Achr10P...	Banana	cytosol	81.81	88.89
TraesCS7D01G344300.4	Wheat	mitochondrion	88.98	85.9
TraesCS7A01G336600.4	Wheat	mitochondrion	88.98	85.9
VIT_15s0021g02450.t01	Wine grape	mitochondrion, plastid	81.14	81.9
KRG88956	Soybean	mitochondrion	75.3	81.35
AT2G45030.1	Thale cress	mitochondrion	79.81	79.71
AT1G45332.1	Thale cress	mitochondrion	79.55	79.44
Bra004884.1-P	Field mustard	plastid	79.15	78.94
CDX74705	Canola	plastid	79.02	78.81
CDY18957	Canola	plastid	79.02	78.7
Solyc01g090690.2.1	Tomato	plastid	78.35	77.63
PGSC0003DMT400066962	Potato	mitochondrion	78.09	77.37
Zm00001d025948_P001	Maize	plastid	42.1	41.28
Zm00001d002822_P001	Maize	plastid	41.7	40.83
Zm00001d012770_P001	Maize	plastid	21.38	19.1
Zm00001d034776_P001	Maize	cytosol	21.38	19.1
Zm00001d034773_P001	Maize	cytosol	21.38	19.1
Zm00001d034771_P002	Maize	cytosol	21.38	19.1
Zm00001d053861_P005	Maize	plastid	16.87	18.9
Zm00001d015929_P002	Maize	plastid	16.73	18.78
Zm00001d000213_P001	Maize	mitochondrion	16.87	18.68
Zm00001d043494_P005	Maize	mitochondrion	16.6	16.85
Zm00001d020342_P001	Maize	mitochondrion	8.76	16.54
Zm00001d046549_P002	Maize	cytosol	19.12	14.71
Zm00001d033505_P001	Maize	cytosol	19.26	13.89

Protein Annotations

EntrezGene:100381906	MapMan:17.7.4.3	Gene3D:2.40.30.10	Gene3D:3.30.230.10	Gene3D:3.30.70.240	Gene3D:3.30.70.870
Gene3D:3.40.50.300	UniProt:A0A096QR66	InterPro:EFG_III	InterPro:EFG_III/V	InterPro:EFG_V	InterPro:EFG_V-like
InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003746
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006412	GO:GO:0006414	GO:GO:0008135
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0070125	InterPro:G_TR_CS	InterPro:IPR000795	InterPro:IPR014721	HAMAP:MF_00054_B	ProteinID:ONM11528.1
ProteinID:ONM11531.1	ProteinID:ONM11533.1	ProteinID:ONM11536.1	ProteinID:ONM11538.1	InterPro:P-loop_NTPase	PFAM:PF00009
PFAM:PF00679	PFAM:PF03144	PFAM:PF03764	PFAM:PF14492	PRINTS:PR00315	ScanProsite:PS00301
PFscan:PS51722	PANTHER:PTHR43636	PANTHER:PTHR43636:SF2	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	SMART:SM00838
SMART:SM00889	SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom
InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR00484	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EFG/EF2	InterPro:Transl_elong_EFG/EF2_IV
UniParc:UPI0002217FBD	EnsemblPlantsGene:Zm00001d034826	EnsemblPlants:Zm00001d034826_P001	EnsemblPlants:Zm00001d034826_T001	SEG:seg	:

Description

Elongation factor G-1 mitochondrial

Coordinates

chr1:-:303088440..303107643

Molecular Weight (calculated)

83652.3 Da

IEP (calculated)

6.472

GRAVY (calculated)

-0.275

Length

753 amino acids

Sequence
(BLAST)

001: MAMTRRSASH LLSAFRPFSL LLQPHLVDSS PAAASARRAM SSASALRARD EKDVARWRES MGRMRNIGIS AHIDSGKTTL TERVLYYTGR IHEIHEVRGR
101: DGVGAKMDSM DLEREKGITI QSAATYCTWK DYQINIIDTP GHVDFTIEVE RALRVLDGAI LVLCSVGGVQ SQSITVDRQM RRYEIPRVAF INKLDRMGAD
201: PWKVLNQARS KLRHHNAAVQ VPIGLEEEFE GLVDLVEMKA YKFEGSSGQN VTASDVPLNM EDLVTEKRRE LIEVVSEVDD QLAEAFLNDE PITANQLKAA
301: IRRATVARKF IPVYMGSAFK NKGVQPLLDG VLDYLPCPLE VYNYALDQNK SEEKVLLAGT PAEPLVALAF KLEEGRFGQL TYLRIYDGVI RKGDFIYNVN
401: TGKKIKVPRL VRMHSNEMED IQEAYAGQIV AVFGVDCASG DTFTDGTVKY TMTSMNVPEP VMSLAVSPIS KDSGGQFSKA LNRFQKEDPT FRVGLDAESG
501: QTIISGMGEL HLDIYVERIK REYKVDAKVG KPRVNFRETI TQRAEFDYLH KKQSGGQGQY GRVCGYIEPL PSGSDGKFEF DNMIIGQAIP SNFIPAIEKG
601: FKEACNSGSL IGHPVENLRI VLTDGASHQV DSSELAFKLA AIYAFRQCYT SAKPVILEPV MKVELKFPTE FQGTVTGDMN KRKGIIVGNE QEGDDTIVVC
701: HVPLNNMFGY ATAIRSATQG KGEFTMEYLE HNVVSQDVQM QLVTSYQAAK GTE

Best Arabidopsis Sequence Match ( AT1G45332.1 )
(BLAST)

001: MARFPTSPAP NRLLRLFSSN KRSSSPTAAL LTGDFQLIRH FSAGTAARVA KDEKEPWWKE SMDKLRNIGI SAHIDSGKTT LTERVLFYTG RIHEIHEVRG
101: RDGVGAKMDS MDLEREKGIT IQSAATYCTW KDYKVNIIDT PGHVDFTIEV ERALRVLDGA ILVLCSVGGV QSQSITVDRQ MRRYEVPRVA FINKLDRMGA
201: DPWKVLNQAR AKLRHHSAAV QVPIGLEENF QGLIDLIHVK AYFFHGSSGE NVVAGDIPAD MEGLVAEKRR ELIETVSEVD DVLAEKFLND EPVSASELEE
301: AIRRATIAQT FVPVFMGSAF KNKGVQPLLD GVVSFLPSPN EVNNYALDQN NNEERVTLTG SPDGPLVALA FKLEEGRFGQ LTYLRVYEGV IKKGDFIINV
401: NTGKRIKVPR LVRMHSNDME DIQEAHAGQI VAVFGIECAS GDTFTDGSVK YTMTSMNVPE PVMSLAVQPV SKDSGGQFSK ALNRFQKEDP TFRVGLDPES
501: GQTIISGMGE LHLDIYVERM RREYKVDATV GKPRVNFRET ITQRAEFDYL HKKQSGGAGQ YGRVTGYVEP LPPGSKEKFE FENMIVGQAI PSGFIPAIEK
601: GFKEAANSGS LIGHPVENLR IVLTDGASHA VDSSELAFKM AAIYAFRLCY TAARPVILEP VMLVELKVPT EFQGTVAGDI NKRKGIIVGN DQEGDDSVIT
701: ANVPLNNMFG YSTSLRSMTQ GKGEFTMEYK EHSAVSNEVQ AQLVNAYSAS KATE

Arabidopsis Description

MEFG1Elongation factor G-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C641]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.