Factsheet for Zm00001d000213_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89181	Sorghum	mitochondrion	94.56	96.69
Os06t0144800-01	Rice	mitochondrion	90.0	92.31
TraesCS7D01G081700.2	Wheat	mitochondrion	86.76	88.59
TraesCS4A01G386100.3	Wheat	mitochondrion	86.76	88.59
HORVU7Hr1G019550.9	Barley	mitochondrion	86.76	88.32
TraesCS7A01G087200.1	Wheat	mitochondrion	86.03	87.84
GSMUA_Achr10P...	Banana	mitochondrion	78.97	79.56
VIT_14s0108g00130.t01	Wine grape	mitochondrion, plastid	78.09	77.97
PGSC0003DMT400034344	Potato	mitochondrion	74.85	77.24
Solyc03g058880.2.1	Tomato	mitochondrion	74.85	77.12
KRH40434	Soybean	mitochondrion	75.29	75.85
Bra028444.1-P	Field mustard	mitochondrion	72.94	75.04
AT5G39900.1	Thale cress	mitochondrion	72.21	74.06
CDX67441	Canola	plastid	72.94	72.3
CDY65319	Canola	endoplasmic reticulum, plastid, vacuole	72.5	71.66
KRH00796	Soybean	nucleus	48.38	50.08
Zm00001d053861_P005	Maize	plastid	45.88	46.43
Zm00001d015929_P002	Maize	plastid	22.65	22.95
Zm00001d043494_P005	Maize	mitochondrion	21.91	20.08
Zm00001d034826_P001	Maize	mitochondrion, plastid	18.68	16.87
Zm00001d025948_P001	Maize	plastid	17.65	15.62
Zm00001d002822_P001	Maize	plastid	17.65	15.6
Zm00001d012770_P001	Maize	plastid	18.97	15.3
Zm00001d034771_P002	Maize	cytosol	18.97	15.3
Zm00001d034773_P001	Maize	cytosol	18.97	15.3
Zm00001d034776_P001	Maize	cytosol	18.97	15.3
Zm00001d033505_P001	Maize	cytosol	20.0	13.03
Zm00001d020342_P001	Maize	mitochondrion	6.76	11.53
Zm00001d046549_P002	Maize	cytosol	16.18	11.24

Protein Annotations

EntrezGene:103638092	Gene3D:2.40.30.10	Gene3D:3.30.70.2570	Gene3D:3.30.70.3380	Gene3D:3.30.70.870	Gene3D:3.40.50.300
MapMan:35.1	UniProt:A0A1X7YGG3	InterPro:EF-4	InterPro:EFG_III/V	InterPro:EFG_V-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0005759
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016787	GO:GO:0019538	GO:GO:0043022	GO:GO:0045727	InterPro:G_TR_CS	InterPro:IPR000795
InterPro:IPR038363	InterPro:LepA_CTD	InterPro:LepA_C_sf	InterPro:LepA_IV	HAMAP:MF_00071	InterPro:P-loop_NTPase
PFAM:PF00009	PFAM:PF00679	PFAM:PF06421	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722
PANTHER:PTHR43512	PANTHER:PTHR43512:SF3	SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom
InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR01393	InterPro:Transl_B-barrel_sf	UniParc:UPI0008437E89	EnsemblPlantsGene:Zm00001d000213
EnsemblPlants:Zm00001d000213_P001	EnsemblPlants:Zm00001d000213_T001	SEG:seg	:	:	:

Description

Putative translation elongation factor family protein

Coordinates

chrB73V4_ctg129:-:120508..127694

Molecular Weight (calculated)

74945.3 Da

IEP (calculated)

8.200

GRAVY (calculated)

-0.202

Length

680 amino acids

Sequence
(BLAST)

001: MTGAAALRQS SRRIFRHLAA APAFSRSGLQ HPERLLSSQS SPEHGARGAV SGSELALYPP ERVRNFSIIA HVDHGKSTLA DRLLELTGTI QKGHGQPQYL
101: DKLQVERERG ITVKAQTATM FYRHITASQD SDMPRYLLNL IDTPGHVDFS YEVSRSLAAC QGALLVVDAA QGVQAQTIAN FYLAFESNLS IIPVINKIDQ
201: PTADPDNVKD QLKRLFDIDP SEALLTSAKT GRGLEQVLPA VIERIPSPPG KCDAPVRMLL LDSYYDEYRG VICHVAVVDG ALRKGDKIAS AATSRAYEVL
301: DVGIMHPELT PTGVLYTGQV GYVISGMRST KEARIGDTLH QAKSTVEPLP GMASHSRNIF MNSLSGFKPV KHMVFSGLYP ADGSDFEALS HAIEKLTCND
401: ASVSVTKETS NALGMGFRCG FLGLLHMDVF HQRLEQEYGA QVISTIPTVP YIFEYGDGSK VQVENPAALA SNPGKRVAAC WEPTVIATII IPSEYVGPVI
501: MLCSERRGEQ LEYTFIDAQR ALLKYRLPLK EIIVDFYNEL KGITSGYATF DYEDSEYQQA DLVKMDILLN GQPVDAMATI VHNQKAQRVG KDLVEKLKKF
601: IERQMFEITI QAAIGSKVIA RETLSAMRKN VLAKCYGGDI TRKKKLLEKQ KEGKKRMKRV GSVDIPQEAF HELLKVSNSK

Best Arabidopsis Sequence Match ( AT5G39900.1 )
(BLAST)

001: MGSMYRASKT LKSSRQALSI LFNSLNSNRQ NPTCIGLYQA YGFSSDSRQS SKEPTIDLTK FPSEKIRNFS IIAHIDHGKS TLADRLMELT GTIKKGHGQP
101: QYLDKLQVER ERGITVKAQT ATMFYENKVE DQEASGYLLN LIDTPGHVDF SYEVSRSLSA CQGALLVVDA AQGVQAQTVA NFYLAFEANL TIVPVINKID
201: QPTADPERVK AQLKSMFDLD TEDVLLVSAK TGLGLEHVLP AVIERIPPPP GISESPLRML LFDSFFNEYK GVICYVSVVD GMLSKGDKVS FAASGQSYEV
301: LDVGIMHPEL TSTGMLLTGQ VGYIVTGMRT TKEARIGDTI YRTKTTVEPL PGFKPVRHMV FSGVYPADGS DFEALGHAME KLTCNDASVS VAKETSTALG
401: MGFRCGFLGL LHMDVFHQRL EQEYGTQVIS TIPTVPYTFE YSDGSKLQVQ NPAALPSNPK YRVTASWEPT VIATIILPSE YVGAVINLCS DRRGQQLEYT
501: FIDAQRVFLK YQLPLREIVV DFYDELKSIT SGYASFDYED AEYQASDLVK LDILLNGQAV DALATIVHKQ KAYRVGKELV EKLKNYIERQ MFEVMIQAAI
601: GSKIIARDTI SAMRKNVLAK CYGGDITRKK KLLEKQKEGK KRMKRVGSVD IPHEAFQQIL KVS

Arabidopsis Description

Translation factor GUF1 homolog, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLE4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.