Factsheet for TraesCS4A01G386100.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G081700.2	Wheat	mitochondrion	99.1	99.1
HORVU7Hr1G019550.9	Barley	mitochondrion	98.95	98.65
TraesCS7A01G087200.1	Wheat	mitochondrion	98.5	98.5
Os06t0144800-01	Rice	mitochondrion	90.84	91.25
EER89181	Sorghum	mitochondrion	89.19	89.32
Zm00001d000213_P001	Maize	mitochondrion	88.59	86.76
GSMUA_Achr10P...	Banana	mitochondrion	79.28	78.22
VIT_14s0108g00130.t01	Wine grape	mitochondrion, plastid	78.83	77.09
Solyc03g058880.2.1	Tomato	mitochondrion	76.13	76.82
PGSC0003DMT400034344	Potato	mitochondrion	75.83	76.63
Bra028444.1-P	Field mustard	mitochondrion	74.32	74.89
KRH40434	Soybean	mitochondrion	75.68	74.67
AT5G39900.1	Thale cress	mitochondrion	73.42	73.76
CDX67441	Canola	plastid	74.32	72.16
CDY65319	Canola	endoplasmic reticulum, plastid, vacuole	73.87	71.51
KRH00796	Soybean	nucleus	48.5	49.16
TraesCS6A01G130900.1	Wheat	plastid	46.85	46.57
TraesCS6A01G192800.1	Wheat	plastid	22.07	21.81
TraesCS3A01G291600.1	Wheat	mitochondrion	21.62	21.4
TraesCS7A01G288600.1	Wheat	cytosol	3.3	18.03
TraesCS2A01G234500.1	Wheat	cytosol	3.3	17.6
TraesCS6A01G189500.1	Wheat	cytosol, nucleus, plastid	3.15	16.8
TraesCS7A01G336600.4	Wheat	mitochondrion	18.77	16.03
TraesCS4A01G363800.1	Wheat	cytosol, nucleus, plastid	19.67	15.54
TraesCS7A01G461100.1	Wheat	cytosol, nucleus, unclear	19.67	15.54
TraesCS4A01G363700.1	Wheat	cytosol, golgi, unclear	19.52	15.42
TraesCS3A01G232300.1	Wheat	cytosol, golgi	19.37	15.3
TraesCS2A01G387000.1	Wheat	mitochondrion, plastid	17.57	15.23
TraesCS1A01G027600.1	Wheat	cytosol	16.97	13.37
TraesCS5A01G370800.1	Wheat	cytosol	19.52	12.44
TraesCS1A01G048300.1	Wheat	mitochondrion, nucleus, plastid	18.02	12.12
TraesCS7A01G380300.1	Wheat	nucleus	16.52	11.07
TraesCS4A01G363900.1	Wheat	plastid	9.76	9.89

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.30.70.2570	Gene3D:3.30.70.3380	Gene3D:3.30.70.870	Gene3D:3.40.50.300	MapMan:35.1
InterPro:EF-4	InterPro:EFG_III/V	InterPro:EFG_V-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_TR_CS	InterPro:IPR000795
InterPro:IPR038363	InterPro:LepA_CTD	InterPro:LepA_C_sf	InterPro:LepA_IV	HAMAP:MF_00071	InterPro:P-loop_NTPase
PFAM:PF00009	PFAM:PF00679	PFAM:PF06421	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722
PANTHER:PTHR43512	PANTHER:PTHR43512:SF3	SUPFAM:SSF52540	SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom
TIGRFAMs:TIGR00231	TIGRFAMs:TIGR01393	EnsemblPlantsGene:TraesCS4A01G386100	EnsemblPlants:TraesCS4A01G386100.3	TIGR:cd01890	TIGR:cd03699
TIGR:cd03709	TIGR:cd16260	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4A:+:663276787..663282956

Molecular Weight (calculated)

73438.5 Da

IEP (calculated)

7.979

GRAVY (calculated)

-0.203

Length

666 amino acids

Sequence
(BLAST)

001: MAGAAALRRA ARSAVRKLAN APAPSRAIVL PERLLSSQAS PEHRPRPGVS ASELGQYPPE RIRNFSIIAH VDHGKSTLAD RLLELTGTIQ KGHGAQYLDK
101: LQVEKERGIT VKAQTATMFY KHTVENPESH GTDTSSYLLN LIDTPGHVDF SYEVSRSLAA CQGALLVVDA AQGVQAQTIA NFYLAFESNL SIIPVINKID
201: QPTADPDNVK AQLKRLFDID PSEALLTSAK TGQGLSQVLP AVIERIPCPP GNCDSPVRML LLDSYYDEYK GVICHVAIVD GAMRKGDKIS SAATGRTYEV
301: FDVGIMHPEL TPTGVLYTGQ VGYVITGMRS TKEARIGDTL HQAKTIVEPL PGFKPVRHMV FSGVYPADGS DFEALSHAIE KLTCNDASVS VTKETSTALG
401: MGFRCGFLGL LHMDVFHQRL EQEYGAQVIS TIPTVPYIFE YGDESKVQIE NPAALNFNAG KRITACWEPT VIATIIIPSE YVGPVIMLCS ERRGEQQEYT
501: FIDANRALLK YRLPLREIIV DFYNELKSIT SGYATFDYED SEYQKSDLVK MDILLNGQPV DAMATIIHNQ KAQKVGRELV DKLKKFIERQ MFEITIQAAI
601: GSKVIARETL SAMRKNVLAK CYGGDITRKK KLLEKQKEGK KRMKRVGSVD IPQEAFHELL KVSSSK

Best Arabidopsis Sequence Match ( AT5G39900.1 )
(BLAST)

001: MGSMYRASKT LKSSRQALSI LFNSLNSNRQ NPTCIGLYQA YGFSSDSRQS SKEPTIDLTK FPSEKIRNFS IIAHIDHGKS TLADRLMELT GTIKKGHGQP
101: QYLDKLQVER ERGITVKAQT ATMFYENKVE DQEASGYLLN LIDTPGHVDF SYEVSRSLSA CQGALLVVDA AQGVQAQTVA NFYLAFEANL TIVPVINKID
201: QPTADPERVK AQLKSMFDLD TEDVLLVSAK TGLGLEHVLP AVIERIPPPP GISESPLRML LFDSFFNEYK GVICYVSVVD GMLSKGDKVS FAASGQSYEV
301: LDVGIMHPEL TSTGMLLTGQ VGYIVTGMRT TKEARIGDTI YRTKTTVEPL PGFKPVRHMV FSGVYPADGS DFEALGHAME KLTCNDASVS VAKETSTALG
401: MGFRCGFLGL LHMDVFHQRL EQEYGTQVIS TIPTVPYTFE YSDGSKLQVQ NPAALPSNPK YRVTASWEPT VIATIILPSE YVGAVINLCS DRRGQQLEYT
501: FIDAQRVFLK YQLPLREIVV DFYDELKSIT SGYASFDYED AEYQASDLVK LDILLNGQAV DALATIVHKQ KAYRVGKELV EKLKNYIERQ MFEVMIQAAI
601: GSKIIARDTI SAMRKNVLAK CYGGDITRKK KLLEKQKEGK KRMKRVGSVD IPHEAFQQIL KVS

Arabidopsis Description

Translation factor GUF1 homolog, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLE4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.