Factsheet for TraesCS7A01G288600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G234500.1	Wheat	cytosol	97.54	95.2
TraesCS6A01G189500.1	Wheat	cytosol, nucleus, plastid	95.9	93.6
CDY70516	Canola	cytosol	86.07	20.63
GSMUA_Achr6P22520_001	Banana	endoplasmic reticulum, extracellular, vacuole	69.67	19.41
Bra010781.1-P	Field mustard	cytosol	86.07	19.02
TraesCS4A01G363900.1	Wheat	plastid	92.62	17.2
CDY32072	Canola	cytosol	86.07	16.23
CDY05533	Canola	cytosol	86.07	16.08
Solyc08g062910.2.1	Tomato	cytosol, extracellular, nucleus, unclear	88.52	14.03
GSMUA_Achr10P...	Banana	cytosol	87.7	13.88
TraesCS4A01G363800.1	Wheat	cytosol, nucleus, plastid	92.62	13.4
TraesCS4A01G363700.1	Wheat	cytosol, golgi, unclear	92.62	13.4
TraesCS7A01G461100.1	Wheat	cytosol, nucleus, unclear	92.62	13.4
CDY40423	Canola	cytosol	86.07	13.34
CDX90241	Canola	cytosol, extracellular	86.07	13.27
TraesCS3A01G232300.1	Wheat	cytosol, golgi	90.98	13.17
Solyc08g062920.2.1	Tomato	nucleus, plastid	88.52	13.04
CDY24982	Canola	endoplasmic reticulum, vacuole	86.07	12.53
Bra010782.1-P	Field mustard	cytosol	86.07	12.46
KRH13696	Soybean	nucleus	86.07	12.46
KRH43759	Soybean	nucleus	86.07	12.46
KRH13692	Soybean	cytosol, mitochondrion	72.95	12.45
AT1G56070.2	Thale cress	cytosol	85.25	12.34
GSMUA_Achr4P01020_001	Banana	cytosol	87.7	12.31
VIT_19s0027g00760.t01	Wine grape	cytosol	86.07	12.31
Bra017279.1-P	Field mustard	cytosol	86.07	11.96
Bra020542.1-P	Field mustard	cytosol	86.07	11.11
KRH13693	Soybean	mitochondrion	68.85	10.16
AT3G12915.2	Thale cress	cytosol	59.02	9.14
TraesCS1A01G027600.1	Wheat	cytosol	63.11	9.11
TraesCS1A01G048300.1	Wheat	mitochondrion, nucleus, plastid	36.89	4.55
TraesCS7A01G380300.1	Wheat	nucleus	36.89	4.53
TraesCS5A01G370800.1	Wheat	cytosol	37.7	4.4
CDY49975	Canola	cytosol	13.93	4.26
TraesCS2A01G387000.1	Wheat	mitochondrion, plastid	26.23	4.17
TraesCS3A01G291600.1	Wheat	mitochondrion	19.67	3.57
TraesCS6A01G192800.1	Wheat	plastid	18.85	3.41
TraesCS4A01G386100.3	Wheat	mitochondrion	18.03	3.3
TraesCS7A01G087200.1	Wheat	mitochondrion	18.03	3.3
TraesCS7A01G336600.4	Wheat	mitochondrion	20.49	3.21
TraesCS6A01G130900.1	Wheat	plastid	17.21	3.13
CDY70526	Canola	nucleus	0.0	0.0
CDY54261	Canola	nucleus	0.0	0.0
CDY49974	Canola	nucleus	0.0	0.0
KRH43761	Soybean	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS7A01G288600.1	EnsemblPlantsGene:TraesCS7A01G288600	Gene3D:3.30.70.870	InterPro:EFG_III/V	PANTHER:PTHR42908	PANTHER:PTHR42908:SF11
PFAM:PF14492	SUPFAM:SSF54980	TIGR:cd16261	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr7A:+:347384184..347384658

Molecular Weight (calculated)

13218.2 Da

IEP (calculated)

5.754

GRAVY (calculated)

-0.021

Length

122 amino acids

Sequence
(BLAST)

001: MKVRIMGPNF VPGQKKDFSS PRNATLTNEK EVDACPIRAM KFSVSPVVRV AVQCKVASDL PKLVEGLKRL AKSDPMVLCS IEDSGEHIIA GAGELHLEIC
101: LKDLQEDFMG GAEIIVSPPV DN

Best Arabidopsis Sequence Match ( AT1G56070.1 )
(BLAST)

001: MVKFTADELR RIMDYKHNIR NMSVIAHVDH GKSTLTDSLV AAAGIIAQEV AGDVRMTDTR ADEAERGITI KSTGISLYYE MTDESLKSFT GARDGNEYLI
101: NLIDSPGHVD FSSEVTAALR ITDGALVVVD CIEGVCVQTE TVLRQALGER IRPVLTVNKM DRCFLELQVD GEEAYQTFSR VIENANVIMA TYEDPLLGDV
201: QVYPEKGTVA FSAGLHGWAF TLTNFAKMYA SKFGVVESKM MERLWGENFF DPATRKWSGK NTGSPTCKRG FVQFCYEPIK QIIATCMNDQ KDKLWPMLAK
301: LGVSMKNDEK ELMGKPLMKR VMQTWLPAST ALLEMMIFHL PSPHTAQRYR VENLYEGPLD DQYANAIRNC DPNGPLMLYV SKMIPASDKG RFFAFGRVFA
401: GKVSTGMKVR IMGPNYIPGE KKDLYTKSVQ RTVIWMGKRQ ETVEDVPCGN TVAMVGLDQF ITKNATLTNE KEVDAHPIRA MKFSVSPVVR VAVQCKVASD
501: LPKLVEGLKR LAKSDPMVVC TMEESGEHIV AGAGELHLEI CLKDLQDDFM GGAEIIKSDP VVSFRETVCD RSTRTVMSKS PNKHNRLYME ARPMEEGLAE
601: AIDDGRIGPR DDPKIRSKIL AEEFGWDKDL AKKIWAFGPE TTGPNMVVDM CKGVQYLNEI KDSVVAGFQW ASKEGPLAEE NMRGICFEVC DVVLHSDAIH
701: RGGGQVIPTA RRVIYASQIT AKPRLLEPVY MVEIQAPEGA LGGIYSVLNQ KRGHVFEEMQ RPGTPLYNIK AYLPVVESFG FSSQLRAATS GQAFPQCVFD
801: HWEMMSSDPL EPGTQASVLV ADIRKRKGLK EAMTPLSEFE DKL

Arabidopsis Description

LOS1Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.