Factsheet for Bra010782.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90241	Canola	cytosol, extracellular	93.71	99.87
Bra010781.1-P	Field mustard	cytosol	65.12	99.46
AT1G56070.2	Thale cress	cytosol	96.44	96.44
Bra017279.1-P	Field mustard	cytosol	99.41	95.44
KRH13696	Soybean	nucleus	94.42	94.42
KRH43759	Soybean	nucleus	94.07	94.07
Solyc08g062920.2.1	Tomato	nucleus, plastid	92.05	93.72
Solyc08g062910.2.1	Tomato	cytosol, extracellular, nucleus, unclear	85.41	93.51
GSMUA_Achr10P...	Banana	cytosol	84.7	92.61
KXG37185	Sorghum	cytosol	92.29	92.29
KXG37183	Sorghum	cytosol	92.29	92.29
Zm00001d012770_P001	Maize	plastid	92.17	92.17
Zm00001d034773_P001	Maize	cytosol	92.17	92.17
Zm00001d034776_P001	Maize	cytosol	92.17	92.17
TraesCS4A01G363800.1	Wheat	cytosol, nucleus, plastid	92.05	92.05
EES01455	Sorghum	cytosol	92.05	92.05
OQU75622	Sorghum	cytosol	37.01	92.04
VIT_19s0027g00760.t01	Wine grape	cytosol	93.12	92.03
Zm00001d034771_P002	Maize	cytosol	91.93	91.93
TraesCS5D01G509700.1	Wheat	cytosol	89.92	91.88
AT3G12915.2	Thale cress	cytosol	85.88	91.88
TraesCS5B01G509600.1	Wheat	cytosol, golgi	91.81	91.81
TraesCS5B01G509500.1	Wheat	cytosol, golgi, nucleus	91.81	91.81
HORVU5Hr1G116580.1	Barley	cytosol, plasma membrane	91.81	91.81
TraesCS5D01G509600.1	Wheat	cytosol	91.81	91.81
TraesCS7D01G449300.1	Wheat	cytosol	91.58	91.58
TraesCS3A01G232300.1	Wheat	cytosol, golgi	91.58	91.58
TraesCS7B01G362600.1	Wheat	cytosol	91.46	91.46
TraesCS7A01G461100.1	Wheat	cytosol, nucleus, unclear	91.46	91.46
HORVU7Hr1G106150.1	Barley	cytosol	91.46	91.46
TraesCS3D01G220900.1	Wheat	golgi	91.46	91.46
TraesCS3B01G261500.1	Wheat	cytosol	91.34	91.34
TraesCS4A01G363700.1	Wheat	cytosol, golgi, unclear	91.34	91.34
TraesCS5B01G509700.1	Wheat	cytosol, golgi	91.34	91.34
HORVU3Hr1G057880.1	Barley	cytosol	91.1	91.1
HORVU3Hr1G057890.1	Barley	cytosol	91.1	91.1
TraesCS5D01G509800.1	Wheat	cytosol	47.92	90.38
GSMUA_Achr4P01020_001	Banana	cytosol	92.05	89.3
Bra020542.1-P	Field mustard	cytosol	99.53	88.78
Os01t0742200-01	Rice	cytosol, nucleus	86.36	88.14
TraesCS4A01G363900.1	Wheat	plastid	68.45	87.82
TraesCS2A01G234500.1	Wheat	cytosol	12.81	86.4
TraesCS7A01G288600.1	Wheat	cytosol	12.46	86.07
TraesCS6A01G189500.1	Wheat	cytosol, nucleus, plastid	12.69	85.6
HORVU5Hr1G116710.1	Barley	cytosol	59.31	85.18
KRH43761	Soybean	cytosol, nucleus, plastid	18.62	78.5
KRH13693	Soybean	mitochondrion	75.09	76.54
GSMUA_Achr6P22520_001	Banana	endoplasmic reticulum, extracellular, vacuole	39.38	75.8
KRH13692	Soybean	cytosol, mitochondrion	61.33	72.31
Zm00001d020342_P001	Maize	mitochondrion	33.93	71.68
TraesCS1D01G023700.1	Wheat	cytosol	61.33	61.47
TraesCS1A01G027600.1	Wheat	cytosol	59.55	59.41
TraesCS1D01G026800.1	Wheat	cytosol	48.52	58.76
TraesCSU01G002600.1	Wheat	cytosol	59.07	57.71
TraesCS1B01G033500.1	Wheat	cytosol	25.86	54.09
HORVU1Hr1G003960.9	Barley	cytosol	57.65	52.71
Os05t0467501-00	Rice	cytosol	27.16	50.22
Bra024798.1-P	Field mustard	cytosol	38.91	33.33
Bra030642.1-P	Field mustard	cytosol	39.03	33.33
Bra033543.1-P	Field mustard	cytosol	30.96	28.68
Bra033895.1-P	Field mustard	cytosol, nucleus, plastid	15.18	26.61
Bra027021.1-P	Field mustard	plastid	21.12	22.97
Bra004884.1-P	Field mustard	plastid	18.98	21.19
Bra022824.1-P	Field mustard	mitochondrion	15.66	20.92
Bra021694.1-P	Field mustard	mitochondrion	15.78	20.4
Bra028444.1-P	Field mustard	mitochondrion	14.71	18.76
Bra028651.1-P	Field mustard	plastid	14.71	18.13
Bra008811.1-P	Field mustard	plastid	14.47	18.1

Protein Annotations

MapMan:17.5.2.1	Gene3D:2.40.30.10	Gene3D:3.30.230.10	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300
Gene3D:3.90.1430.10	EnsemblPlantsGene:Bra010782	EnsemblPlants:Bra010782.1	EnsemblPlants:Bra010782.1-P	InterPro:EFG_III/V	InterPro:EFG_V-like
InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	InterPro:G_TR_CS	InterPro:IPR000795	InterPro:IPR014721	UniProt:M4D2S9
InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF00679	PFAM:PF03144	PFAM:PF03764	PFAM:PF14492
PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR42908	PANTHER:PTHR42908:SF11	InterPro:Ribosomal_S5_D2-typ_fold
InterPro:Ribosomal_S5_D2-typ_fold_subgr	SMART:SM00838	SMART:SM00889	SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54211
SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EFG/EF2_IV
UniParc:UPI0002546F16	:	:	:	:	:

Description

AT1G56070 (E=0.0) LOS1 | LOS1; copper ion binding / translation elongation factor/ translation factor, nucleic acid binding

Coordinates

chrA08:-:16422978..16425697

Molecular Weight (calculated)

94002.6 Da

IEP (calculated)

6.162

GRAVY (calculated)

-0.230

Length

843 amino acids

Sequence
(BLAST)

001: MVKFTADELR RIMDYKHNIR NMSVIAHVDH GKSTLTDSLV AAAGIIAQEV AGDVRMTDTR ADEAERGITI KSTGISLYYE MTDASLKSFT GARDGNEYLI
101: NLIDSPGHVD FSSEVTAALR ITDGALVVVD CIEGVCVQTE TVLRQALGER IRPVLTVNKM DRCFLELQVD GEEAYQTFQR VIENANVIMA TYEDPLLGDV
201: QVYPEKGTVA FSAGLHGWAF TLTNFAKMYA SKFGVDETKM MERLWGENFF DPATRKWSSK NTGSATCKRG FVQFCYEPIK QIIATCMNDQ KDKLWPMLQK
301: LGVQMKSDEK ELMGKPLMKR VMQTWLPAST ALLEMMIFHL PSPHTAQRYR VENLYEGPLD DQYATAIRNC DPNGPLMLYV SKMIPASDKG RFFAFGRVFS
401: GKVSTGMKVR IMGPNFVPGE KKDLYVKSVQ RTVIWMGKRQ ETVEDVPCGN TVAMVGLDQF ITKNATLTNE KEVDAHPIRA MKFSVSPVVR VAVQCKVASD
501: LPKLVEGLKR LAKSDPMVVC TMEESGEHIV AGAGELHLEI CLKDLQDDFM GGAEIVKSDP VVSFRETVLE RSVRTVMSKS PNKHNRLYME ARPLEDGLAE
601: AIDDGRIGPR DDPKIRSKIL AEEFGWDKDL AKKIWAFGPE TTGPNMVVDM CKGVQYLNEI KDSVVAGFQW ASKEGPLCDE NMRGICFEVC DVVLHSDAIH
701: RGGGQVIPTA RRVIYASQLT AKPRLLEPVY MVEIQAPEGA LGGIYSVLNQ KRGHVFEEMQ RPGTPLYNIK AYLPVVESFG FSSQLRAATS GQAFPQCVFD
801: HWEMMSSDPL EAGSQASTLV TDIRKRKGMK EQMTPLSDFE DKL

Best Arabidopsis Sequence Match ( AT1G56070.1 )
(BLAST)

001: MVKFTADELR RIMDYKHNIR NMSVIAHVDH GKSTLTDSLV AAAGIIAQEV AGDVRMTDTR ADEAERGITI KSTGISLYYE MTDESLKSFT GARDGNEYLI
101: NLIDSPGHVD FSSEVTAALR ITDGALVVVD CIEGVCVQTE TVLRQALGER IRPVLTVNKM DRCFLELQVD GEEAYQTFSR VIENANVIMA TYEDPLLGDV
201: QVYPEKGTVA FSAGLHGWAF TLTNFAKMYA SKFGVVESKM MERLWGENFF DPATRKWSGK NTGSPTCKRG FVQFCYEPIK QIIATCMNDQ KDKLWPMLAK
301: LGVSMKNDEK ELMGKPLMKR VMQTWLPAST ALLEMMIFHL PSPHTAQRYR VENLYEGPLD DQYANAIRNC DPNGPLMLYV SKMIPASDKG RFFAFGRVFA
401: GKVSTGMKVR IMGPNYIPGE KKDLYTKSVQ RTVIWMGKRQ ETVEDVPCGN TVAMVGLDQF ITKNATLTNE KEVDAHPIRA MKFSVSPVVR VAVQCKVASD
501: LPKLVEGLKR LAKSDPMVVC TMEESGEHIV AGAGELHLEI CLKDLQDDFM GGAEIIKSDP VVSFRETVCD RSTRTVMSKS PNKHNRLYME ARPMEEGLAE
601: AIDDGRIGPR DDPKIRSKIL AEEFGWDKDL AKKIWAFGPE TTGPNMVVDM CKGVQYLNEI KDSVVAGFQW ASKEGPLAEE NMRGICFEVC DVVLHSDAIH
701: RGGGQVIPTA RRVIYASQIT AKPRLLEPVY MVEIQAPEGA LGGIYSVLNQ KRGHVFEEMQ RPGTPLYNIK AYLPVVESFG FSSQLRAATS GQAFPQCVFD
801: HWEMMSSDPL EPGTQASVLV ADIRKRKGLK EAMTPLSEFE DKL

Arabidopsis Description

LOS1Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.