CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 5
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43761	Soybean	cytosol, nucleus, plastid	19.95	82.5
CDY49975	Canola	cytosol	37.48	77.69
KRH43759	Soybean	nucleus	78.36	76.87
KRH13696	Soybean	nucleus	78.36	76.87
GSMUA_Achr10P...	Banana	cytosol	71.34	76.52
Solyc08g062910.2.1	Tomato	cytosol, extracellular, nucleus, unclear	70.62	75.84
Solyc08g062920.2.1	Tomato	nucleus, plastid	75.82	75.72
TraesCS5D01G509800.1	Wheat	cytosol	40.87	75.62
OQU75622	Sorghum	cytosol	30.96	75.52
KXG37183	Sorghum	cytosol	76.9	75.44
EES01455	Sorghum	cytosol	76.9	75.44
KXG37185	Sorghum	cytosol	76.9	75.44
Zm00001d034771_P002	Maize	cytosol	76.78	75.33
Zm00001d012770_P001	Maize	plastid	76.66	75.21
Zm00001d034773_P001	Maize	cytosol	76.66	75.21
Zm00001d034776_P001	Maize	cytosol	76.66	75.21
Bra010782.1-P	Field mustard	cytosol	76.54	75.09
VIT_19s0027g00760.t01	Wine grape	cytosol	77.39	75.03
TraesCS3A01G232300.1	Wheat	cytosol, golgi	76.42	74.97
CDY05533	Canola	cytosol	59.13	74.89
TraesCS3D01G220900.1	Wheat	golgi	76.3	74.85
TraesCS7D01G449300.1	Wheat	cytosol	76.3	74.85
TraesCS7B01G362600.1	Wheat	cytosol	76.3	74.85
Bra010781.1-P	Field mustard	cytosol	49.94	74.82
TraesCS3B01G261500.1	Wheat	cytosol	76.18	74.73
AT1G56070.2	Thale cress	cytosol	76.18	74.73
TraesCS4A01G363800.1	Wheat	cytosol, nucleus, plastid	76.18	74.73
HORVU7Hr1G106150.1	Barley	cytosol	76.18	74.73
TraesCS7A01G461100.1	Wheat	cytosol, nucleus, unclear	76.18	74.73
CDY70516	Canola	cytosol	45.95	74.66
CDY32072	Canola	cytosol	58.4	74.65
TraesCS5B01G509600.1	Wheat	cytosol, golgi	76.06	74.61
HORVU3Hr1G057890.1	Barley	cytosol	76.06	74.61
HORVU3Hr1G057880.1	Barley	cytosol	76.06	74.61
CDX90241	Canola	cytosol, extracellular	71.34	74.59
TraesCS5B01G509500.1	Wheat	cytosol, golgi, nucleus	75.94	74.5
TraesCS4A01G363700.1	Wheat	cytosol, golgi, unclear	75.94	74.5
HORVU5Hr1G116580.1	Barley	cytosol, plasma membrane	75.94	74.5
TraesCS5D01G509700.1	Wheat	cytosol	74.24	74.42
TraesCS5B01G509700.1	Wheat	cytosol, golgi	75.82	74.38
TraesCS5D01G509600.1	Wheat	cytosol	75.82	74.38
AT3G12915.2	Thale cress	cytosol	70.37	73.86
Os01t0742200-01	Rice	cytosol, nucleus	73.76	73.85
GSMUA_Achr4P01020_001	Banana	cytosol	77.15	73.42
TraesCS4A01G363900.1	Wheat	plastid	58.04	73.06
CDY40423	Canola	cytosol	69.29	72.81
Bra017279.1-P	Field mustard	cytosol	76.66	72.21
CDY24982	Canola	endoplasmic reticulum, vacuole	72.43	71.48
TraesCS6A01G189500.1	Wheat	cytosol, nucleus, plastid	10.64	70.4
TraesCS2A01G234500.1	Wheat	cytosol	10.64	70.4
KRH13692	Soybean	cytosol, mitochondrion	60.58	70.07
HORVU5Hr1G116710.1	Barley	cytosol	49.21	69.34
TraesCS7A01G288600.1	Wheat	cytosol	10.16	68.85
Bra020542.1-P	Field mustard	cytosol	76.54	66.98
CDY70526	Canola	nucleus	6.65	64.71
CDY49974	Canola	nucleus	6.53	63.53
GSMUA_Achr6P22520_001	Banana	endoplasmic reticulum, extracellular, vacuole	32.53	61.42
Zm00001d020342_P001	Maize	mitochondrion	27.21	56.39
TraesCS1A01G027600.1	Wheat	cytosol	54.41	53.25
TraesCS1D01G023700.1	Wheat	cytosol	53.08	52.2
TraesCS1D01G026800.1	Wheat	cytosol	43.65	51.87
TraesCSU01G002600.1	Wheat	cytosol	53.69	51.45
CDY54261	Canola	nucleus	13.78	49.57
HORVU1Hr1G003960.9	Barley	cytosol	52.96	47.51
Os05t0467501-00	Rice	cytosol	25.76	46.71
TraesCS1B01G033500.1	Wheat	cytosol	22.25	45.66
KRH40894	Soybean	cytosol	15.48	36.99
KRH20245	Soybean	nucleus	36.15	30.32
KRH03566	Soybean	nucleus	36.03	30.16
KRG94823	Soybean	cytosol	34.95	28.28
KRH75282	Soybean	cytosol	6.05	25.64
KRH57341	Soybean	nucleus, plastid	20.07	21.28
KRH04069	Soybean	nucleus, plastid	20.07	21.09
KRG88956	Soybean	mitochondrion	17.29	20.52
KRH75283	Soybean	cytosol, mitochondrion	10.52	19.82
KRH55837	Soybean	plastid	15.36	18.96
KRH25682	Soybean	plastid	15.11	18.66
KRH40434	Soybean	mitochondrion	14.39	17.63
KRH53996	Soybean	plasma membrane	14.39	17.32
KRH71976	Soybean	nucleus	13.3	16.27
KRH33159	Soybean	nucleus	13.3	16.18
KRH63943	Soybean	plastid	14.27	15.73
KRH63330	Soybean	cytosol, plasma membrane	4.47	13.75
KRH75280	Soybean	mitochondrion	2.18	13.64
KRH63332	Soybean	cytosol	4.23	12.92
KRH00796	Soybean	nucleus	9.43	11.87

Protein Annotations

EntrezGene:100790826	MapMan:17.5.2.1	Gene3D:2.40.30.10	Gene3D:3.30.230.10	Gene3D:3.30.70.240	Gene3D:3.30.70.870
Gene3D:3.40.50.300	Gene3D:3.90.1430.10	EMBL:ACUP02009772	InterPro:EFG_III/V	InterPro:EFG_V-like	InterPro:EFTu-like_2
EnsemblPlantsGene:GLYMA_15G256900	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	InterPro:IPR000795	InterPro:IPR014721	UniProt:K7MDZ1	EnsemblPlants:KRH13693
ProteinID:KRH13693	ProteinID:KRH13693.1	ProteinID:KRH13694.1	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF00679
PFAM:PF03144	PFAM:PF03764	PFAM:PF14492	PRINTS:PR00315	PFscan:PS51722	PANTHER:PTHR42908
PANTHER:PTHR42908:SF11	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	SMART:SM00838	SMART:SM00889	SUPFAM:SSF50447
SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231
InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EFG/EF2_IV	UniParc:UPI000296D039	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:48643774..48647392

Molecular Weight (calculated)

91899.4 Da

IEP (calculated)

6.667

GRAVY (calculated)

-0.173

Length

827 amino acids

Sequence
(BLAST)

001: MVKFTTHRLR HIMDCKHNIR NMSVIAHVNH GKSTLTDSLV AASGNIIAQE GEAERGNTVK SSGISLYYAM PEGDLKNFKG EREGNEFLIN LIDSPGHVDF
101: SSEVSTALRI TDGALVVVDC VEGVCAQTET VLRQALGERV KPVLALNKMD RCFLELNLDP EEAYLTLQRV VESVNVIVGN YEDALLGDVK VYPEKGTVAF
201: SAGLHGWGFT LTNFAKMYAS KFGVDEAKMM SRLWGENFFD SATKKWTNRH TGASTCKRGF VRFCYEPIKQ VIELCMNDQK DKLCPLLQKL GLNLKFEKEL
301: TGKALMKCVM QSWLPASSAI LEMMIFHLPS PASAQKYRVE NLYEGPLDDP YASAIRNCDP EGPLMLYVSK MIPTSDKGRF YAFGRVFSGK VSTNMKARIM
401: GPNFVPGEKK DLYVKSVQGT SIWMGKKYET VEDVPCGNTV ALAGLDHFIT KNATITNETE IEAHPIRAMK FSVSPLVSVA VNCNAASDLP KLVEGLKRLA
501: KSDPIMMCTI SETGEHIIGA TGELHLETCV KDLKDDFMNG IEISISDPIV SFKETVLEKS CHTVMSKSPN KHNRLYMEAR PMEEGLVEAI ERGKIGPKNN
601: NKMVCEEFGW DKDLAKRIWC FGPDTIGPNM MVDACKGVQY LNEIKEAVLA GFQIASREGP LAEENLRGVC FDLCDVVLHA DTIHRGGGQI IPTARRAFYA
701: AILSAKPRLL EPVYVMEIQA HEKALGGINS VVNKKRGHVF EEIQRPGTPF YNVKAYIPVI ESFKFSETLR TQIGEQAFPQ MVFDHWDMVQ SDPLEPGTPA
801: SACVADIRKK KGLNEQVMPL CVFEDML

Best Arabidopsis Sequence Match ( AT1G56070.1 )
(BLAST)

001: MVKFTADELR RIMDYKHNIR NMSVIAHVDH GKSTLTDSLV AAAGIIAQEV AGDVRMTDTR ADEAERGITI KSTGISLYYE MTDESLKSFT GARDGNEYLI
101: NLIDSPGHVD FSSEVTAALR ITDGALVVVD CIEGVCVQTE TVLRQALGER IRPVLTVNKM DRCFLELQVD GEEAYQTFSR VIENANVIMA TYEDPLLGDV
201: QVYPEKGTVA FSAGLHGWAF TLTNFAKMYA SKFGVVESKM MERLWGENFF DPATRKWSGK NTGSPTCKRG FVQFCYEPIK QIIATCMNDQ KDKLWPMLAK
301: LGVSMKNDEK ELMGKPLMKR VMQTWLPAST ALLEMMIFHL PSPHTAQRYR VENLYEGPLD DQYANAIRNC DPNGPLMLYV SKMIPASDKG RFFAFGRVFA
401: GKVSTGMKVR IMGPNYIPGE KKDLYTKSVQ RTVIWMGKRQ ETVEDVPCGN TVAMVGLDQF ITKNATLTNE KEVDAHPIRA MKFSVSPVVR VAVQCKVASD
501: LPKLVEGLKR LAKSDPMVVC TMEESGEHIV AGAGELHLEI CLKDLQDDFM GGAEIIKSDP VVSFRETVCD RSTRTVMSKS PNKHNRLYME ARPMEEGLAE
601: AIDDGRIGPR DDPKIRSKIL AEEFGWDKDL AKKIWAFGPE TTGPNMVVDM CKGVQYLNEI KDSVVAGFQW ASKEGPLAEE NMRGICFEVC DVVLHSDAIH
701: RGGGQVIPTA RRVIYASQIT AKPRLLEPVY MVEIQAPEGA LGGIYSVLNQ KRGHVFEEMQ RPGTPLYNIK AYLPVVESFG FSSQLRAATS GQAFPQCVFD
801: HWEMMSSDPL EPGTQASVLV ADIRKRKGLK EAMTPLSEFE DKL

Arabidopsis Description

LOS1Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.