Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc08g062920.2.1 | Tomato | nucleus, plastid | 92.5 | 95.29 |
KRH43759 | Soybean | nucleus | 93.9 | 95.02 |
KRH13696 | Soybean | nucleus | 93.9 | 95.02 |
Solyc08g062910.2.1 | Tomato | cytosol, extracellular, nucleus, unclear | 85.7 | 94.94 |
GSMUA_Achr10P... | Banana | cytosol | 85.58 | 94.68 |
KXG37185 | Sorghum | cytosol | 92.85 | 93.95 |
KXG37183 | Sorghum | cytosol | 92.85 | 93.95 |
CDY49975 | Canola | cytosol | 43.85 | 93.73 |
EES01455 | Sorghum | cytosol | 92.61 | 93.71 |
TraesCS3D01G220900.1 | Wheat | golgi | 92.5 | 93.59 |
Zm00001d012770_P001 | Maize | plastid | 92.38 | 93.48 |
Zm00001d034776_P001 | Maize | cytosol | 92.26 | 93.36 |
Zm00001d034773_P001 | Maize | cytosol | 92.26 | 93.36 |
Zm00001d034771_P002 | Maize | cytosol | 92.26 | 93.36 |
TraesCS3A01G232300.1 | Wheat | cytosol, golgi | 92.26 | 93.36 |
CDY05533 | Canola | cytosol | 71.4 | 93.26 |
TraesCS3B01G261500.1 | Wheat | cytosol | 92.15 | 93.24 |
CDX90241 | Canola | cytosol, extracellular | 86.4 | 93.17 |
Bra010782.1-P | Field mustard | cytosol | 92.03 | 93.12 |
HORVU3Hr1G057880.1 | Barley | cytosol | 91.91 | 93.0 |
HORVU3Hr1G057890.1 | Barley | cytosol | 91.91 | 93.0 |
Bra010781.1-P | Field mustard | cytosol | 60.14 | 92.93 |
CDY70516 | Canola | cytosol | 55.45 | 92.93 |
OQU75622 | Sorghum | cytosol | 36.93 | 92.92 |
AT1G56070.2 | Thale cress | cytosol | 91.56 | 92.65 |
TraesCS5D01G509700.1 | Wheat | cytosol | 89.57 | 92.61 |
CDY32072 | Canola | cytosol | 70.22 | 92.58 |
TraesCS5B01G509600.1 | Wheat | cytosol, golgi | 91.32 | 92.41 |
TraesCS5D01G509600.1 | Wheat | cytosol | 91.32 | 92.41 |
TraesCS4A01G363800.1 | Wheat | cytosol, nucleus, plastid | 91.21 | 92.29 |
TraesCS5B01G509500.1 | Wheat | cytosol, golgi, nucleus | 91.21 | 92.29 |
HORVU5Hr1G116580.1 | Barley | cytosol, plasma membrane | 91.21 | 92.29 |
TraesCS7D01G449300.1 | Wheat | cytosol | 90.74 | 91.81 |
HORVU7Hr1G106150.1 | Barley | cytosol | 90.62 | 91.7 |
TraesCS7A01G461100.1 | Wheat | cytosol, nucleus, unclear | 90.62 | 91.7 |
TraesCS7B01G362600.1 | Wheat | cytosol | 90.62 | 91.7 |
TraesCS4A01G363700.1 | Wheat | cytosol, golgi, unclear | 90.39 | 91.46 |
TraesCS5B01G509700.1 | Wheat | cytosol, golgi | 90.27 | 91.34 |
GSMUA_Achr4P01020_001 | Banana | cytosol | 92.26 | 90.56 |
CDY24982 | Canola | endoplasmic reticulum, vacuole | 87.92 | 89.5 |
TraesCS5D01G509800.1 | Wheat | cytosol | 46.89 | 89.49 |
Os01t0742200-01 | Rice | cytosol, nucleus | 86.52 | 89.35 |
AT3G12915.2 | Thale cress | cytosol | 82.53 | 89.34 |
Bra017279.1-P | Field mustard | cytosol | 91.91 | 89.29 |
CDY40423 | Canola | cytosol | 82.18 | 89.07 |
TraesCS4A01G363900.1 | Wheat | plastid | 68.11 | 88.43 |
CDY70526 | Canola | nucleus | 8.68 | 87.06 |
HORVU5Hr1G116710.1 | Barley | cytosol | 59.67 | 86.71 |
TraesCS2A01G234500.1 | Wheat | cytosol | 12.66 | 86.4 |
TraesCS7A01G288600.1 | Wheat | cytosol | 12.31 | 86.07 |
CDY49974 | Canola | nucleus | 8.56 | 85.88 |
TraesCS6A01G189500.1 | Wheat | cytosol, nucleus, plastid | 12.54 | 85.6 |
Bra020542.1-P | Field mustard | cytosol | 92.5 | 83.49 |
KRH43761 | Soybean | cytosol, nucleus, plastid | 18.29 | 78.0 |
KRH13693 | Soybean | mitochondrion | 75.03 | 77.39 |
GSMUA_Achr6P22520_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 39.51 | 76.94 |
Zm00001d020342_P001 | Maize | mitochondrion | 34.0 | 72.68 |
KRH13692 | Soybean | cytosol, mitochondrion | 60.84 | 72.59 |
CDY54261 | Canola | nucleus | 17.47 | 64.78 |
TraesCS1D01G023700.1 | Wheat | cytosol | 61.2 | 62.07 |
TraesCS1A01G027600.1 | Wheat | cytosol | 59.44 | 60.0 |
TraesCS1D01G026800.1 | Wheat | cytosol | 48.89 | 59.91 |
TraesCSU01G002600.1 | Wheat | cytosol | 59.2 | 58.52 |
TraesCS1B01G033500.1 | Wheat | cytosol | 26.14 | 55.34 |
HORVU1Hr1G003960.9 | Barley | cytosol | 57.91 | 53.58 |
Os05t0467501-00 | Rice | cytosol | 27.08 | 50.66 |
VIT_11s0118g00720.t01 | Wine grape | nucleus | 38.8 | 33.5 |
VIT_04s0044g01790.t01 | Wine grape | cytosol | 35.17 | 29.13 |
VIT_00s0323g00080.t01 | Wine grape | plastid | 20.98 | 23.1 |
VIT_15s0021g02450.t01 | Wine grape | mitochondrion, plastid | 19.23 | 21.98 |
VIT_00s1286g00020.t01 | Wine grape | cytosol, mitochondrion | 5.28 | 21.33 |
VIT_12s0028g02640.t01 | Wine grape | mitochondrion, plastid | 15.83 | 20.09 |
VIT_08s0007g08290.t01 | Wine grape | plastid | 15.01 | 18.96 |
VIT_07s0031g03050.t01 | Wine grape | plastid | 14.54 | 18.24 |
VIT_14s0108g00130.t01 | Wine grape | mitochondrion, plastid | 14.54 | 18.21 |
Protein Annotations
EntrezGene:100261253 | wikigene:100261253 | MapMan:17.5.2.1 | Gene3D:2.40.30.10 | Gene3D:3.30.230.10 | Gene3D:3.30.70.240 |
Gene3D:3.30.70.870 | Gene3D:3.40.50.300 | Gene3D:3.90.1430.10 | ProteinID:CCB47226 | ProteinID:CCB47226.1 | InterPro:EFG_III/V |
InterPro:EFG_V-like | InterPro:EFTu-like_2 | UniProt:F6H4T7 | EMBL:FN595234 | GO:GO:0000166 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | InterPro:G_TR_CS |
InterPro:IPR000795 | InterPro:IPR014721 | EntrezGene:LOC100261253 | wikigene:LOC100261253 | InterPro:P-loop_NTPase | PFAM:PF00009 |
PFAM:PF00679 | PFAM:PF03144 | PFAM:PF03764 | PFAM:PF14492 | PRINTS:PR00315 | ScanProsite:PS00301 |
PFscan:PS51722 | PANTHER:PTHR42908 | PANTHER:PTHR42908:SF11 | InterPro:Ribosomal_S5_D2-typ_fold | InterPro:Ribosomal_S5_D2-typ_fold_subgr | SMART:SM00838 |
SMART:SM00889 | SUPFAM:SSF50447 | SUPFAM:SSF52540 | SUPFAM:SSF54211 | SUPFAM:SSF54980 | InterPro:Small_GTP-bd_dom |
TIGR:TC57090 | TIGR:TC67346 | InterPro:TF_GTP-bd_dom | TIGRFAMs:TIGR00231 | InterPro:Transl_B-barrel_sf | InterPro:Transl_elong_EFG/EF2_IV |
UniParc:UPI000210A97A | ArrayExpress:VIT_19s0027g00760 | EnsemblPlantsGene:VIT_19s0027g00760 | EnsemblPlants:VIT_19s0027g00760.t01 | unigene:Vvi.6678 | RefSeq:XP_002266780 |
RefSeq:XP_002266780.1 | RefSeq:XP_003634783 | RefSeq:XP_003634783.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr19:-:19970711..19975371
Molecular Weight (calculated)
95243.0 Da
IEP (calculated)
5.974
GRAVY (calculated)
-0.232
Length
853 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFNRICLPL WVKFTVEELR RIMDYKHNIR NMSVIAHVDH GKSTLTDSLV AAAGIIAQEV AGDVRMTDTR QDEAERGITI KSTGISLYYE MSDESLKNYR
101: GERQGNEYLI NLIDSPGHVD FSSEVTAALR ITDGALVVVD CVEGVCVQTE TVLRQALGER IRPVLTVNKM DRCFLELQVD GEEAYQTFSR VIENANVIMA
201: TYEDPLLGDV QVYPEKGTVA FSAGLHGWAF TLTNFAKMYA SKFGVDESKM MERLWGENFF DPSTRKWTTK NTGAPNCKRG FVQFCYEPIK QIINTCMNDQ
301: KDKLWPMLQK LGVTMKSDEK DLMGKALMKR VMQTWLPAST ALLEMMIFHL PSPSTAQKYR VENLYEGPLD DIYATAIRNC DPEGPLMLYV SKMIPASDKG
401: RFFAFGRVFS GKVSTGLKVR IMGPNYVPGE KKDLYVKSVQ RTVIWMGKRQ ETVEDVPCGN TVAMVGLDQF ITKNATLTNE KESDAHPIRA MKFSVSPVVR
501: VAVQCKVASD LPKLVEGLKR LAKSDPMVVC SIEESGEHII AGAGELHLEI CLKDLQDDFM GGAEIVKSDP VVSFRETVLE KSCRTVMSKS PNKHNRLYME
601: ARPLEEGLAE AIDDGRVGPR DDPKARSKIL SEEFGWDKDL AKKIWCFGPE TTGPNMVVDM CKGVQYLNEI KDSVVAGFQW ASKEGALAEE NMRGICFEVC
701: DVVLHADAIH RGGGQVIPTA RRVIYASQLT AKPRLLEPVY LVEIQAPEQA LGGIYSVLNQ KRGHVFEEMQ RPGTPLYNIK AYLPVVESFG FSGTLRAATS
801: GQAFPQCVFD HWDVMSADPL EAGSTAAQLV ADIRKRKGLK EQMTPLSEFE DKL
101: GERQGNEYLI NLIDSPGHVD FSSEVTAALR ITDGALVVVD CVEGVCVQTE TVLRQALGER IRPVLTVNKM DRCFLELQVD GEEAYQTFSR VIENANVIMA
201: TYEDPLLGDV QVYPEKGTVA FSAGLHGWAF TLTNFAKMYA SKFGVDESKM MERLWGENFF DPSTRKWTTK NTGAPNCKRG FVQFCYEPIK QIINTCMNDQ
301: KDKLWPMLQK LGVTMKSDEK DLMGKALMKR VMQTWLPAST ALLEMMIFHL PSPSTAQKYR VENLYEGPLD DIYATAIRNC DPEGPLMLYV SKMIPASDKG
401: RFFAFGRVFS GKVSTGLKVR IMGPNYVPGE KKDLYVKSVQ RTVIWMGKRQ ETVEDVPCGN TVAMVGLDQF ITKNATLTNE KESDAHPIRA MKFSVSPVVR
501: VAVQCKVASD LPKLVEGLKR LAKSDPMVVC SIEESGEHII AGAGELHLEI CLKDLQDDFM GGAEIVKSDP VVSFRETVLE KSCRTVMSKS PNKHNRLYME
601: ARPLEEGLAE AIDDGRVGPR DDPKARSKIL SEEFGWDKDL AKKIWCFGPE TTGPNMVVDM CKGVQYLNEI KDSVVAGFQW ASKEGALAEE NMRGICFEVC
701: DVVLHADAIH RGGGQVIPTA RRVIYASQLT AKPRLLEPVY LVEIQAPEQA LGGIYSVLNQ KRGHVFEEMQ RPGTPLYNIK AYLPVVESFG FSGTLRAATS
801: GQAFPQCVFD HWDVMSADPL EAGSTAAQLV ADIRKRKGLK EQMTPLSEFE DKL
001: MVKFTADELR RIMDYKHNIR NMSVIAHVDH GKSTLTDSLV AAAGIIAQEV AGDVRMTDTR ADEAERGITI KSTGISLYYE MTDESLKSFT GARDGNEYLI
101: NLIDSPGHVD FSSEVTAALR ITDGALVVVD CIEGVCVQTE TVLRQALGER IRPVLTVNKM DRCFLELQVD GEEAYQTFSR VIENANVIMA TYEDPLLGDV
201: QVYPEKGTVA FSAGLHGWAF TLTNFAKMYA SKFGVVESKM MERLWGENFF DPATRKWSGK NTGSPTCKRG FVQFCYEPIK QIIATCMNDQ KDKLWPMLAK
301: LGVSMKNDEK ELMGKPLMKR VMQTWLPAST ALLEMMIFHL PSPHTAQRYR VENLYEGPLD DQYANAIRNC DPNGPLMLYV SKMIPASDKG RFFAFGRVFA
401: GKVSTGMKVR IMGPNYIPGE KKDLYTKSVQ RTVIWMGKRQ ETVEDVPCGN TVAMVGLDQF ITKNATLTNE KEVDAHPIRA MKFSVSPVVR VAVQCKVASD
501: LPKLVEGLKR LAKSDPMVVC TMEESGEHIV AGAGELHLEI CLKDLQDDFM GGAEIIKSDP VVSFRETVCD RSTRTVMSKS PNKHNRLYME ARPMEEGLAE
601: AIDDGRIGPR DDPKIRSKIL AEEFGWDKDL AKKIWAFGPE TTGPNMVVDM CKGVQYLNEI KDSVVAGFQW ASKEGPLAEE NMRGICFEVC DVVLHSDAIH
701: RGGGQVIPTA RRVIYASQIT AKPRLLEPVY MVEIQAPEGA LGGIYSVLNQ KRGHVFEEMQ RPGTPLYNIK AYLPVVESFG FSSQLRAATS GQAFPQCVFD
801: HWEMMSSDPL EPGTQASVLV ADIRKRKGLK EAMTPLSEFE DKL
101: NLIDSPGHVD FSSEVTAALR ITDGALVVVD CIEGVCVQTE TVLRQALGER IRPVLTVNKM DRCFLELQVD GEEAYQTFSR VIENANVIMA TYEDPLLGDV
201: QVYPEKGTVA FSAGLHGWAF TLTNFAKMYA SKFGVVESKM MERLWGENFF DPATRKWSGK NTGSPTCKRG FVQFCYEPIK QIIATCMNDQ KDKLWPMLAK
301: LGVSMKNDEK ELMGKPLMKR VMQTWLPAST ALLEMMIFHL PSPHTAQRYR VENLYEGPLD DQYANAIRNC DPNGPLMLYV SKMIPASDKG RFFAFGRVFA
401: GKVSTGMKVR IMGPNYIPGE KKDLYTKSVQ RTVIWMGKRQ ETVEDVPCGN TVAMVGLDQF ITKNATLTNE KEVDAHPIRA MKFSVSPVVR VAVQCKVASD
501: LPKLVEGLKR LAKSDPMVVC TMEESGEHIV AGAGELHLEI CLKDLQDDFM GGAEIIKSDP VVSFRETVCD RSTRTVMSKS PNKHNRLYME ARPMEEGLAE
601: AIDDGRIGPR DDPKIRSKIL AEEFGWDKDL AKKIWAFGPE TTGPNMVVDM CKGVQYLNEI KDSVVAGFQW ASKEGPLAEE NMRGICFEVC DVVLHSDAIH
701: RGGGQVIPTA RRVIYASQIT AKPRLLEPVY MVEIQAPEGA LGGIYSVLNQ KRGHVFEEMQ RPGTPLYNIK AYLPVVESFG FSSQLRAATS GQAFPQCVFD
801: HWEMMSSDPL EPGTQASVLV ADIRKRKGLK EAMTPLSEFE DKL
Arabidopsis Description
LOS1Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASR1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.