Factsheet for TraesCS6A01G189500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G234500.1	Wheat	cytosol	96.8	96.8
TraesCS7A01G288600.1	Wheat	cytosol	93.6	95.9
CDY70516	Canola	cytosol	85.6	21.02
GSMUA_Achr6P22520_001	Banana	endoplasmic reticulum, extracellular, vacuole	69.6	19.86
Bra010781.1-P	Field mustard	cytosol	85.6	19.38
TraesCS4A01G363900.1	Wheat	plastid	91.2	17.35
CDY32072	Canola	cytosol	85.6	16.54
CDY05533	Canola	cytosol	85.6	16.39
Solyc08g062910.2.1	Tomato	cytosol, extracellular, nucleus, unclear	88.0	14.29
GSMUA_Achr10P...	Banana	cytosol	86.4	14.01
CDY40423	Canola	cytosol	85.6	13.6
CDX90241	Canola	cytosol, extracellular	85.6	13.53
TraesCS4A01G363800.1	Wheat	cytosol, nucleus, plastid	91.2	13.52
TraesCS4A01G363700.1	Wheat	cytosol, golgi, unclear	91.2	13.52
TraesCS7A01G461100.1	Wheat	cytosol, nucleus, unclear	91.2	13.52
TraesCS3A01G232300.1	Wheat	cytosol, golgi	89.6	13.29
Solyc08g062920.2.1	Tomato	nucleus, plastid	88.0	13.29
CDY24982	Canola	endoplasmic reticulum, vacuole	85.6	12.77
Bra010782.1-P	Field mustard	cytosol	85.6	12.69
KRH13696	Soybean	nucleus	85.6	12.69
KRH43759	Soybean	nucleus	85.6	12.69
KRH13692	Soybean	cytosol, mitochondrion	72.0	12.59
AT1G56070.2	Thale cress	cytosol	84.8	12.57
VIT_19s0027g00760.t01	Wine grape	cytosol	85.6	12.54
GSMUA_Achr4P01020_001	Banana	cytosol	87.2	12.54
Bra017279.1-P	Field mustard	cytosol	85.6	12.19
Bra020542.1-P	Field mustard	cytosol	85.6	11.32
KRH13693	Soybean	mitochondrion	70.4	10.64
TraesCS1A01G027600.1	Wheat	cytosol	64.0	9.47
AT3G12915.2	Thale cress	cytosol	59.2	9.39
TraesCS7A01G380300.1	Wheat	nucleus	40.0	5.03
TraesCS1A01G048300.1	Wheat	mitochondrion, nucleus, plastid	39.2	4.95
TraesCS5A01G370800.1	Wheat	cytosol	39.2	4.69
CDY49975	Canola	cytosol	13.6	4.26
TraesCS2A01G387000.1	Wheat	mitochondrion, plastid	25.6	4.17
TraesCS3A01G291600.1	Wheat	mitochondrion	19.2	3.57
TraesCS7A01G336600.4	Wheat	mitochondrion	20.8	3.33
TraesCS6A01G130900.1	Wheat	plastid	17.6	3.28
TraesCS6A01G192800.1	Wheat	plastid	17.6	3.26
TraesCS4A01G386100.3	Wheat	mitochondrion	16.8	3.15
TraesCS7A01G087200.1	Wheat	mitochondrion	16.8	3.15
CDY54261	Canola	nucleus	0.8	0.43
CDY70526	Canola	nucleus	0.0	0.0
CDY49974	Canola	nucleus	0.0	0.0
KRH43761	Soybean	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6A01G189500.1	EnsemblPlantsGene:TraesCS6A01G189500	Gene3D:3.30.70.870	InterPro:EFG_III/V	PANTHER:PTHR42908	PANTHER:PTHR42908:SF11
PFAM:PF14492	SUPFAM:SSF54980	TIGR:cd16261	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr6A:-:242009145..242009628

Molecular Weight (calculated)

13554.6 Da

IEP (calculated)

5.758

GRAVY (calculated)

0.094

Length

125 amino acids

Sequence
(BLAST)

001: MKVRIMGPNF VPGQKKDFSS PRNATLTNEE EVDACPIRAM KFSVSPVVRV AVQCKVASDL PKLVEGLKRL AKSDPLVLCS IEDSGEHIIA GAGELHLEIC
101: LKDLQEDFMG GAEIIVSSPV VSFCR

Best Arabidopsis Sequence Match ( AT1G56070.1 )
(BLAST)

001: MVKFTADELR RIMDYKHNIR NMSVIAHVDH GKSTLTDSLV AAAGIIAQEV AGDVRMTDTR ADEAERGITI KSTGISLYYE MTDESLKSFT GARDGNEYLI
101: NLIDSPGHVD FSSEVTAALR ITDGALVVVD CIEGVCVQTE TVLRQALGER IRPVLTVNKM DRCFLELQVD GEEAYQTFSR VIENANVIMA TYEDPLLGDV
201: QVYPEKGTVA FSAGLHGWAF TLTNFAKMYA SKFGVVESKM MERLWGENFF DPATRKWSGK NTGSPTCKRG FVQFCYEPIK QIIATCMNDQ KDKLWPMLAK
301: LGVSMKNDEK ELMGKPLMKR VMQTWLPAST ALLEMMIFHL PSPHTAQRYR VENLYEGPLD DQYANAIRNC DPNGPLMLYV SKMIPASDKG RFFAFGRVFA
401: GKVSTGMKVR IMGPNYIPGE KKDLYTKSVQ RTVIWMGKRQ ETVEDVPCGN TVAMVGLDQF ITKNATLTNE KEVDAHPIRA MKFSVSPVVR VAVQCKVASD
501: LPKLVEGLKR LAKSDPMVVC TMEESGEHIV AGAGELHLEI CLKDLQDDFM GGAEIIKSDP VVSFRETVCD RSTRTVMSKS PNKHNRLYME ARPMEEGLAE
601: AIDDGRIGPR DDPKIRSKIL AEEFGWDKDL AKKIWAFGPE TTGPNMVVDM CKGVQYLNEI KDSVVAGFQW ASKEGPLAEE NMRGICFEVC DVVLHSDAIH
701: RGGGQVIPTA RRVIYASQIT AKPRLLEPVY MVEIQAPEGA LGGIYSVLNQ KRGHVFEEMQ RPGTPLYNIK AYLPVVESFG FSSQLRAATS GQAFPQCVFD
801: HWEMMSSDPL EPGTQASVLV ADIRKRKGLK EAMTPLSEFE DKL

Arabidopsis Description

LOS1Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.