Factsheet for GSMUA_Achr6P22520_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

nucleus 1
cytosol 2
extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G234500.1	Wheat	cytosol	20.09	70.4
TraesCS7A01G288600.1	Wheat	cytosol	19.41	69.67
TraesCS6A01G189500.1	Wheat	cytosol, nucleus, plastid	19.86	69.6
CDY70516	Canola	cytosol	51.14	44.01
CDY32072	Canola	cytosol	62.33	42.19
CDY05533	Canola	cytosol	62.79	42.11
CDX90241	Canola	cytosol, extracellular	75.34	41.72
Bra010781.1-P	Field mustard	cytosol	52.28	41.49
CDY40423	Canola	cytosol	74.43	41.42
TraesCS5D01G509700.1	Wheat	cytosol	76.94	40.85
Os01t0742200-01	Rice	cytosol, nucleus	76.71	40.68
Zm00001d020342_P001	Maize	mitochondrion	36.99	40.6
HORVU5Hr1G116710.1	Barley	cytosol	53.88	40.2
KRH13696	Soybean	nucleus	77.17	40.09
KRH43759	Soybean	nucleus	77.17	40.09
TraesCS5B01G509600.1	Wheat	cytosol, golgi	76.94	39.98
KXG37183	Sorghum	cytosol	76.94	39.98
TraesCS5B01G509500.1	Wheat	cytosol, golgi, nucleus	76.94	39.98
TraesCS4A01G363800.1	Wheat	cytosol, nucleus, plastid	76.94	39.98
HORVU5Hr1G116580.1	Barley	cytosol, plasma membrane	76.94	39.98
HORVU7Hr1G106150.1	Barley	cytosol	76.94	39.98
KXG37185	Sorghum	cytosol	76.94	39.98
TraesCS5D01G509600.1	Wheat	cytosol	76.94	39.98
EES01455	Sorghum	cytosol	76.94	39.98
TraesCS7A01G461100.1	Wheat	cytosol, nucleus, unclear	76.94	39.98
TraesCS7D01G449300.1	Wheat	cytosol	76.71	39.86
TraesCS7B01G362600.1	Wheat	cytosol	76.48	39.74
Zm00001d012770_P001	Maize	plastid	76.48	39.74
Zm00001d034771_P002	Maize	cytosol	76.48	39.74
GSMUA_Achr4P01020_001	Banana	cytosol	78.77	39.7
TraesCS5B01G509700.1	Wheat	cytosol, golgi	76.26	39.62
TraesCS4A01G363700.1	Wheat	cytosol, golgi, unclear	76.26	39.62
Zm00001d034773_P001	Maize	cytosol	76.26	39.62
Zm00001d034776_P001	Maize	cytosol	76.26	39.62
GSMUA_Achr10P...	Banana	cytosol	69.63	39.56
VIT_19s0027g00760.t01	Wine grape	cytosol	76.94	39.51
TraesCS3D01G220900.1	Wheat	golgi	76.03	39.5
KRH43761	Soybean	cytosol, nucleus, plastid	18.04	39.5
CDY24982	Canola	endoplasmic reticulum, vacuole	75.57	39.5
Bra010782.1-P	Field mustard	cytosol	75.8	39.38
TraesCS3A01G232300.1	Wheat	cytosol, golgi	75.8	39.38
TraesCS3B01G261500.1	Wheat	cytosol	75.8	39.38
HORVU3Hr1G057890.1	Barley	cytosol	75.57	39.26
HORVU3Hr1G057880.1	Barley	cytosol	75.57	39.26
AT1G56070.2	Thale cress	cytosol	74.89	38.91
Solyc08g062920.2.1	Tomato	nucleus, plastid	72.83	38.53
Solyc08g062910.2.1	Tomato	cytosol, extracellular, nucleus, unclear	67.12	38.18
Bra017279.1-P	Field mustard	cytosol	75.8	37.81
TraesCS4A01G363900.1	Wheat	plastid	56.16	37.44
AT3G12915.2	Thale cress	cytosol	65.07	36.17
TraesCS1B01G033500.1	Wheat	cytosol	32.65	35.48
Bra020542.1-P	Field mustard	cytosol	75.57	35.03
CDY49975	Canola	cytosol	30.82	33.83
KRH13693	Soybean	mitochondrion	61.42	32.53
KRH13692	Soybean	cytosol, mitochondrion	51.14	31.33
OQU75622	Sorghum	cytosol	23.97	30.97
TraesCS5D01G509800.1	Wheat	cytosol	28.31	27.74
TraesCS1D01G026800.1	Wheat	cytosol	44.06	27.73
TraesCS1A01G027600.1	Wheat	cytosol	51.37	26.63
TraesCSU01G002600.1	Wheat	cytosol	51.6	26.19
TraesCS1D01G023700.1	Wheat	cytosol	49.54	25.8
CDY54261	Canola	nucleus	13.47	25.65
HORVU1Hr1G003960.9	Barley	cytosol	52.05	24.73
Os05t0467501-00	Rice	cytosol	17.58	16.89
GSMUA_Achr4P09280_001	Banana	cytosol, nucleus, plastid	32.88	14.83
GSMUA_Achr2P17400_001	Banana	cytosol	26.48	14.08
GSMUA_Achr5P13570_001	Banana	mitochondrion	21.23	12.85
GSMUA_Achr10P...	Banana	cytosol	20.09	12.7
GSMUA_Achr5P14760_001	Banana	plastid	15.98	10.28
GSMUA_Achr8P27160_001	Banana	mitochondrion	15.3	10.0
GSMUA_Achr3P07220_001	Banana	cytosol, nucleus, plastid	12.1	9.4
GSMUA_Achr10P...	Banana	mitochondrion	13.7	8.89
CDY70526	Canola	nucleus	1.37	7.06
CDY49974	Canola	nucleus	1.37	7.06

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.30.230.10	Gene3D:3.30.70.870	Gene3D:3.40.50.300	MapMan:35.1	InterPro:EFG_III/V
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr6G22520_001	EnsemblPlants:GSMUA_Achr6P22520_001	EnsemblPlants:GSMUA_Achr6T22520_001	InterPro:IPR000795	InterPro:IPR014721
UniProt:M0T9A0	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF14492	PANTHER:PTHR42908	PANTHER:PTHR42908:SF11
InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF54980
InterPro:TF_GTP-bd_dom	InterPro:Transl_B-barrel_sf	UniParc:UPI0002955C5E	SEG:seg	:	:

Description

Elongation factor 2 [Source:GMGC_GENE;Acc:GSMUA_Achr6G22520_001]

Coordinates

chr6:+:20565083..20567066

Molecular Weight (calculated)

49304.8 Da

IEP (calculated)

7.306

GRAVY (calculated)

0.173

Length

438 amino acids

Sequence
(BLAST)

001: MLSLNIDIRS WYLQVSSLLS LILWLLLLES LHKKSGNEYL INLVDSPWAC LTSLLRITDG ALVVVDCVEG VCVQTETVLR QALGERIRLV LTVNKMDRCF
101: LELQVEGEEA YQTFQRVIEK ANVIMATYVD TLLGDVQVYI QRTCTRVLLM IYMPMLSEIV IRRALLCYIK TWYVKSVRRT VIWMGKKQES VEDVPCGNTV
201: AMVGLDQFIT KKNASLTNEK EVDAHPIRAM KVCVSPVVRV AVRCKVASHL RKLVEGLKRL AKSDPMVVCT IEESGEHIVA GAGELHLEIC LKDLQEGFMG
301: GAEIVVSDPV VVSFRETVLE KSWRIGPRDD PKARSKILSE EFGWDKDLAK KIWCFAVAEE NMRGICFEVC DVVLHADAIH RGGGGQVIIP TATRVIYAAQ
401: LTAKPRLLEP VYLVEIQAPE EALGRYLWCS KPEARSRL

Best Arabidopsis Sequence Match ( AT1G56070.1 )
(BLAST)

001: MVKFTADELR RIMDYKHNIR NMSVIAHVDH GKSTLTDSLV AAAGIIAQEV AGDVRMTDTR ADEAERGITI KSTGISLYYE MTDESLKSFT GARDGNEYLI
101: NLIDSPGHVD FSSEVTAALR ITDGALVVVD CIEGVCVQTE TVLRQALGER IRPVLTVNKM DRCFLELQVD GEEAYQTFSR VIENANVIMA TYEDPLLGDV
201: QVYPEKGTVA FSAGLHGWAF TLTNFAKMYA SKFGVVESKM MERLWGENFF DPATRKWSGK NTGSPTCKRG FVQFCYEPIK QIIATCMNDQ KDKLWPMLAK
301: LGVSMKNDEK ELMGKPLMKR VMQTWLPAST ALLEMMIFHL PSPHTAQRYR VENLYEGPLD DQYANAIRNC DPNGPLMLYV SKMIPASDKG RFFAFGRVFA
401: GKVSTGMKVR IMGPNYIPGE KKDLYTKSVQ RTVIWMGKRQ ETVEDVPCGN TVAMVGLDQF ITKNATLTNE KEVDAHPIRA MKFSVSPVVR VAVQCKVASD
501: LPKLVEGLKR LAKSDPMVVC TMEESGEHIV AGAGELHLEI CLKDLQDDFM GGAEIIKSDP VVSFRETVCD RSTRTVMSKS PNKHNRLYME ARPMEEGLAE
601: AIDDGRIGPR DDPKIRSKIL AEEFGWDKDL AKKIWAFGPE TTGPNMVVDM CKGVQYLNEI KDSVVAGFQW ASKEGPLAEE NMRGICFEVC DVVLHSDAIH
701: RGGGQVIPTA RRVIYASQIT AKPRLLEPVY MVEIQAPEGA LGGIYSVLNQ KRGHVFEEMQ RPGTPLYNIK AYLPVVESFG FSSQLRAATS GQAFPQCVFD
801: HWEMMSSDPL EPGTQASVLV ADIRKRKGLK EAMTPLSEFE DKL

Arabidopsis Description

LOS1Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.