Factsheet for GSMUA_Achr8P27160_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0028g02640.t01	Wine grape	mitochondrion, plastid	81.04	80.8
CDX84803	Canola	mitochondrion	75.07	80.61
EES01486	Sorghum	mitochondrion	80.75	80.39
TraesCS3D01G291300.1	Wheat	mitochondrion	80.3	79.94
TraesCS3B01G326200.1	Wheat	mitochondrion	80.3	79.94
KRH55837	Soybean	plastid	79.85	79.85
TraesCS3A01G291600.1	Wheat	mitochondrion	80.15	79.79
KRH25682	Soybean	plastid	79.7	79.7
Os01t0752700-01	Rice	mitochondrion	80.0	79.64
CDY54484	Canola	mitochondrion	78.06	78.18
Bra022824.1-P	Field mustard	mitochondrion	73.58	78.13
CDY19061	Canola	mitochondrion	77.76	77.88
Solyc07g053470.2.1	Tomato	mitochondrion	77.31	77.78
PGSC0003DMT400024321	Potato	mitochondrion	77.31	77.78
AT2G31060.3	Thale cress	mitochondrion	77.46	77.35
Bra021694.1-P	Field mustard	mitochondrion	75.22	77.3
HORVU3Hr1G072230.1	Barley	plastid	80.15	77.27
Zm00001d043494_P005	Maize	mitochondrion	79.85	72.1
GSMUA_Achr5P14760_001	Banana	plastid	38.81	38.18
GSMUA_Achr3P07220_001	Banana	cytosol, nucleus, plastid	19.7	23.4
GSMUA_Achr10P...	Banana	mitochondrion	22.99	22.81
GSMUA_Achr10P...	Banana	cytosol	17.61	17.03
GSMUA_Achr10P...	Banana	cytosol	19.1	16.6
GSMUA_Achr5P13570_001	Banana	mitochondrion	16.87	15.61
GSMUA_Achr4P01020_001	Banana	cytosol	19.85	15.3
GSMUA_Achr6P22520_001	Banana	endoplasmic reticulum, extracellular, vacuole	10.0	15.3
GSMUA_Achr4P09280_001	Banana	cytosol, nucleus, plastid	18.21	12.56
GSMUA_Achr2P17400_001	Banana	cytosol	14.78	12.01

Protein Annotations

Gene3D:2.40.30.10	Gene3D:2.40.50.250	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300	MapMan:35.1
InterPro:BipA_V	InterPro:EFG_III/V	InterPro:EFG_V-like	InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr8G27160_001	EnsemblPlants:GSMUA_Achr8P27160_001
EnsemblPlants:GSMUA_Achr8T27160_001	InterPro:G_TR_CS	InterPro:IPR000795	UniProt:M0TU19	InterPro:P-loop_NTPase	PFAM:PF00009
PFAM:PF00679	PFAM:PF03144	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR42908
PANTHER:PTHR42908:SF8	SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom
TIGRFAMs:TIGR00231	TIGRFAMs:TIGR01394	InterPro:Transl_B-barrel_sf	InterPro:TypA_GTP-bd	UniParc:UPI0002956358	SEG:seg

Description

Putative GTP-binding protein TypA/BipA homolog [Source:GMGC_GENE;Acc:GSMUA_Achr8G27160_001]

Coordinates

chr8:+:30402807..30415864

Molecular Weight (calculated)

72804.0 Da

IEP (calculated)

7.480

GRAVY (calculated)

-0.159

Length

670 amino acids

Sequence
(BLAST)

001: MASLLLRALR RPLRPFSSAP VSPFPFYCRT PSSSFRLFSS AAAHAAAPPS PARTALDPSR IRNVAVIAHV DHGKTTLMDR LLRQCGADIP HERALDSISL
101: ERERGITIAS KVTSISWKDN ELNMVDTPGH ADFGGEVERV VGMVEGAVLV VDAGEGPLAQ TKFVVAKALK LGLRPILLLN KVDRPSVSEE TCNEVESLVF
201: DLFANLGATE EQLDFPVLYA SAKEGWASLT FTKNPVADAR NMSPLLDAII KHVPSPAANL EAPFQMLVSM MERDFYLGRI LTGRISSGII HIGDKIHGLR
301: CTDNGAEKFE EGKVTKLMKK KGTNIIMIDS AGAGDIISVA GLTSPSIGHT VANVEVTTAL PTVQLDPPTI SMTFGVNDSS LAGRDGTHLT GGKIGDRLLS
401: EAETNLAINV LPGQLSDSYE VQGRGELQLG ILIENMRREG FELSVSPPRV MYKMENNQKL EPIEEVTIEV NDEHVGLVME ALSHRRAEVT DMGPVPGTTG
501: RTRMSLTCPS RGLVGYRSVF SSDTRGTGFM HRAFLSYSKH RGALGNVRKG VLISVGNGII TAHALMSLEA RGTLFVSPGM ETYEGMIVGE HSRDSDLDVN
601: PVRTKELTNI RAPGKDENVR LSPPRLMSLE EAIGYVASDE LIEVTPKAVR LRKRYLDANK RKMMKNKPKD

Best Arabidopsis Sequence Match ( AT2G31060.2 )
(BLAST)

001: MAGPLLRSLW SNTTRRSFSS HSSPSKFGYS LSSLRSFSAA TASTAAAGAP NSSLDPNRLR NVAVIAHVDH GKTTLMDRLL RQCGADIPHE RAMDSINLER
101: ERGITISSKV TSIFWKDNEL NMVDTPGHAD FGGEVERVVG MVEGAILVVD AGEGPLAQTK FVLAKALKYG LRPILLLNKV DRPSVTEERC DEVESLVFDL
201: FANCGATEEQ LDFPVLYASA KEGWASSTYT KDPPVDAKNM ADLLDAVVRH VQPPKANLDE PFLMLVSMME KDFYLGRILT GRVTSGVVRV GDRVNGLRKT
301: DSGSEKIEEA KVVKLMKKKG TTIVSIDAAG AGDIICMAGL TAPSIGHTVA SAEVTTALPT VELDPPTISM TFGVNDSPLA GQDGTHLTGG RIGDRLMAEA
401: ETNLAINVIP GLSESYEVQG RGELQLGILI ENMRREGFEL SVSPPKVMYK TEKGQKLEPI EEVTIEINDE HVGLVMEALS HRRAEVIDMG PVPGNEGRTR
501: LSLTCPSRGL VGYRCVFSSD TRGTGFMHRA FLTYEKYRGP LGNVRKGVLV SMARGTITAH SLMSLEARGI LFVSPGLDSY DGMIIGEHSR ETDLDLNPVK
601: AKELTNIRSA GKDENVKLSP PRLMTLEEAI GYVASDELIE VTPKTIRLRK RCLDVNKRKS QSKRAKD

Arabidopsis Description

Elongation factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IPW5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.