Factsheet for HORVU3Hr1G072230.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G291300.1	Wheat	mitochondrion	95.4	98.51
TraesCS3B01G326200.1	Wheat	mitochondrion	95.4	98.51
TraesCS3A01G291600.1	Wheat	mitochondrion	95.25	98.37
EES01486	Sorghum	mitochondrion	86.33	89.15
Os01t0752700-01	Rice	mitochondrion	85.18	87.96
GSMUA_Achr8P27160_001	Banana	mitochondrion	77.27	80.15
Zm00001d043494_P005	Maize	mitochondrion	85.04	79.65
VIT_12s0028g02640.t01	Wine grape	mitochondrion, plastid	75.54	78.12
CDX84803	Canola	mitochondrion	69.21	77.08
KRH55837	Soybean	plastid	73.81	76.57
KRH25682	Soybean	plastid	73.81	76.57
Bra022824.1-P	Field mustard	mitochondrion	69.06	76.07
CDY19061	Canola	mitochondrion	72.23	75.04
CDY54484	Canola	mitochondrion	72.09	74.89
AT2G31060.3	Thale cress	mitochondrion	72.09	74.66
Bra021694.1-P	Field mustard	mitochondrion	69.64	74.23
Solyc07g053470.2.1	Tomato	mitochondrion	70.79	73.87
PGSC0003DMT400024321	Potato	mitochondrion	70.65	73.72
HORVU6Hr1G050160.1	Barley	plastid	26.33	34.33
HORVU6Hr1G025110.1	Barley	plastid	18.99	24.72
HORVU7Hr1G019550.9	Barley	mitochondrion	21.01	21.86
HORVU3Hr1G057880.1	Barley	cytosol	19.71	16.25
HORVU3Hr1G057890.1	Barley	cytosol	19.71	16.25
HORVU7Hr1G082910.2	Barley	mitochondrion	17.7	16.23
HORVU2Hr1G092180.1	Barley	plastid	17.55	15.99
HORVU7Hr1G106150.1	Barley	cytosol	18.99	15.66
HORVU5Hr1G116580.1	Barley	cytosol, plasma membrane	18.99	15.66
HORVU6Hr1G025120.1	Barley	cytosol	2.16	13.89
HORVU1Hr1G003960.9	Barley	cytosol	17.55	13.23
HORVU7Hr1G090710.6	Barley	plastid	16.98	11.92
HORVU5Hr1G116710.1	Barley	cytosol	9.35	11.07
HORVU5Hr1G092260.1	Barley	nucleus, plastid	18.56	11.06
HORVU1Hr1G009320.1	Barley	nucleus	10.94	8.5

Protein Annotations

Gene3D:2.40.30.10	Gene3D:2.40.50.250	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300	MapMan:35.1
UniProt:A0A287LLQ9	InterPro:EFG_III/V	InterPro:EFG_V-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0016787	InterPro:G_TR_CS	EnsemblPlantsGene:HORVU3Hr1G072230	EnsemblPlants:HORVU3Hr1G072230.1
InterPro:IPR000795	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF00679	PRINTS:PR00315	ScanProsite:PS00301
PFscan:PS51722	PANTHER:PTHR42908	PANTHER:PTHR42908:SF8	SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54980
InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR01394	InterPro:Transl_B-barrel_sf	InterPro:TypA_GTP-bd
UniParc:UPI000B469E91	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:544406606..544419403

Molecular Weight (calculated)

75042.9 Da

IEP (calculated)

7.081

GRAVY (calculated)

-0.138

Length

695 amino acids

Sequence
(BLAST)

001: PEPTAQNLAH APPSPAAAAT NDMAAALLLR GLRSSAGRAR PAFPSPASAP PPFTSSLLHR LYSSAAASAA SPPASALGGV MDPARIRNVA VIAHVDHGKT
101: TLMDRLLRQC GADIPHERAM DNISLERERG ITISSKVTSV SWKENELNMV DTPGHADFGG EVERVVGMVE GAVLVVDAGE GPLAQTKFVL SKALKYGLRP
201: ILLLNKVDRP SVSEETCNEV ESLVFDLFAN LGATEEQLDF PVLYASAKEG WASLKFTKCP SDSEKNMSPL LDSIVQHVRS PKADLEAPFQ MLVSMMERDF
301: YLGRILTGRV TSGAIRVGDK VHGLRITDEG VQKIEDGKVV KLMKKKGTSM AIIEAAGAGD IISMAGLSGP AIGHTVANPE VLTALPAVEL DPPTISMTFG
401: VNDSPLAGRD GTHVTGAKIG NRLMAEAETN LAINVLPGPL SESYEVQGRG ELQLGILIEN MRREGFELSV SPPRVMYKTE RGERLEPIEE VTVEVDEEHI
501: GFVLETLNNR KGELLDMGPV PGTVGRTRVF MTCPSRGLVG VKGVFNSFTR GTGFMHRAFQ AYAKYRGPLG TVRKGVLVSV GRGFITSHAL MSLEARGTLF
601: VSPGMETYEG MIVGEHSRDS DLEINPVRTK ELTNIRAPGK DENIRLSPPR LMTLEEAIGY VAVDELIEVT PKVIRLRKKY LDANKRKMMK NKIVH

Best Arabidopsis Sequence Match ( AT2G31060.2 )
(BLAST)

001: MAGPLLRSLW SNTTRRSFSS HSSPSKFGYS LSSLRSFSAA TASTAAAGAP NSSLDPNRLR NVAVIAHVDH GKTTLMDRLL RQCGADIPHE RAMDSINLER
101: ERGITISSKV TSIFWKDNEL NMVDTPGHAD FGGEVERVVG MVEGAILVVD AGEGPLAQTK FVLAKALKYG LRPILLLNKV DRPSVTEERC DEVESLVFDL
201: FANCGATEEQ LDFPVLYASA KEGWASSTYT KDPPVDAKNM ADLLDAVVRH VQPPKANLDE PFLMLVSMME KDFYLGRILT GRVTSGVVRV GDRVNGLRKT
301: DSGSEKIEEA KVVKLMKKKG TTIVSIDAAG AGDIICMAGL TAPSIGHTVA SAEVTTALPT VELDPPTISM TFGVNDSPLA GQDGTHLTGG RIGDRLMAEA
401: ETNLAINVIP GLSESYEVQG RGELQLGILI ENMRREGFEL SVSPPKVMYK TEKGQKLEPI EEVTIEINDE HVGLVMEALS HRRAEVIDMG PVPGNEGRTR
501: LSLTCPSRGL VGYRCVFSSD TRGTGFMHRA FLTYEKYRGP LGNVRKGVLV SMARGTITAH SLMSLEARGI LFVSPGLDSY DGMIIGEHSR ETDLDLNPVK
601: AKELTNIRSA GKDENVKLSP PRLMTLEEAI GYVASDELIE VTPKTIRLRK RCLDVNKRKS QSKRAKD

Arabidopsis Description

Elongation factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IPW5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.