Factsheet for HORVU6Hr1G025110.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G120800.1	Wheat	plastid	93.82	74.78
TraesCS6B01G159200.1	Wheat	plastid	93.45	74.48
TraesCS6A01G130900.1	Wheat	plastid	93.45	74.48
KRH63330	Soybean	cytosol, plasma membrane	35.02	69.52
OQU84405	Sorghum	plastid	84.08	66.72
Zm00001d053861_P005	Maize	plastid	83.52	66.37
GSMUA_Achr3P07220_001	Banana	cytosol, nucleus, plastid	67.23	63.65
KRH63332	Soybean	cytosol	31.65	62.36
VIT_07s0031g03050.t01	Wine grape	plastid	74.91	58.82
KRH53996	Soybean	plasma membrane	74.34	57.79
PGSC0003DMT400070154	Potato	plastid	73.6	57.62
Solyc04g015450.2.1	Tomato	nucleus	73.41	57.56
CDY44781	Canola	plastid	71.72	56.74
AT5G08650.1	Thale cress	plastid	72.1	56.53
CDY40739	Canola	plastid	71.72	55.99
Bra028651.1-P	Field mustard	plastid	71.54	55.85
KRH63943	Soybean	plastid	73.41	52.27
HORVU7Hr1G019550.9	Barley	mitochondrion	41.2	32.93
HORVU6Hr1G050160.1	Barley	plastid	21.72	21.76
HORVU3Hr1G072230.1	Barley	plastid	24.72	18.99
HORVU7Hr1G082910.2	Barley	mitochondrion	21.35	15.04
HORVU2Hr1G092180.1	Barley	plastid	20.79	14.55
HORVU7Hr1G106150.1	Barley	cytosol	19.66	12.46
HORVU5Hr1G116580.1	Barley	cytosol, plasma membrane	19.66	12.46
HORVU3Hr1G057890.1	Barley	cytosol	19.66	12.46
HORVU3Hr1G057880.1	Barley	cytosol	19.66	12.46
HORVU1Hr1G003960.9	Barley	cytosol	17.79	10.3
HORVU7Hr1G090710.6	Barley	plastid	17.6	9.49
HORVU5Hr1G092260.1	Barley	nucleus, plastid	19.85	9.09
HORVU5Hr1G116710.1	Barley	cytosol	8.43	7.67
HORVU1Hr1G009320.1	Barley	nucleus	9.18	5.48
HORVU6Hr1G025120.1	Barley	cytosol	0.37	1.85

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.30.70.3380	Gene3D:3.30.70.870	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A287TM53
InterPro:EF-4	InterPro:EFG_III/V	InterPro:EFG_V-like	InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0005759	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009536	GO:GO:0009987	GO:GO:0016020
GO:GO:0016787	GO:GO:0019538	GO:GO:0043022	GO:GO:0045727	InterPro:G_TR_CS	EnsemblPlantsGene:HORVU6Hr1G025110
EnsemblPlants:HORVU6Hr1G025110.1	InterPro:IPR000795	HAMAP:MF_00071	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF00679
PFAM:PF03144	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR43512	PANTHER:PTHR43512:SF1
SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231
TIGRFAMs:TIGR01393	InterPro:Transl_B-barrel_sf	UniParc:UPI000B474F26	SEG:seg	:	:

Description

Translation factor GUF1 homolog, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A287TM53]

Coordinates

chrchr6H:-:89568863..89574790

Molecular Weight (calculated)

57052.6 Da

IEP (calculated)

5.221

GRAVY (calculated)

-0.213

Length

534 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX PLASGRRRPA APFSATSRPR ALSAASRGRV LCLAASAPAS STDAGQDRLQ KVPITNIRNF CIIAHIDHGK STLADKLLEM
101: TGTVQKRDMK QQFLDNMDLE RERGITIKLQ AARMRYVMNN EPYCLNLIDT PGHVDFSYEV SRSLAACEGA LLVVDASQGV EAQTLANVYL ALESNLEIIP
201: VLNKIDLPGA EPDRIAQEIE EIIGLDCSNA IRCSAKEGIG ITEILDAIVT KVPPPKDTLK NPLRALIFDS YYDAYRGVIV YFRVIDGSIR KGDKICFMAN
301: KKEYVADEIG VLSPNQMEAD ELHAGEVGYL SASIRSVADA RVGDTITHFA KRAESALPGY SEATPMVFCG LFPLEADQFE ELREALGRLQ LNDAALKFEP
401: ESSSAMGFGF RCGFLGLLHM EIVQERLERE YNLNLIITAP SVVYRVNCSN NETVECSNPS LLPEPGKRRS IEEPYVKIEL LTPKDYIGPI MELGQERRGE
501: FKEMNYITEN RAKLTYMLPL AEMTGTTYQR RRPN

Best Arabidopsis Sequence Match ( AT5G08650.1 )
(BLAST)

001: MAMASAMDLS SPPTFFLSGT STSSPSLRRL SSISVSGFRR HSNRKLQILC QATAGTEPQS GLSVSGSKLA ARSGQDRLLK VPISNIRNFS IIAHIDHGKS
101: TLADKLLQVT GTVQNRDMKE QFLDNMDLER ERGITIKLQA ARMRYVYEDT PFCLNLIDTP GHVDFSYEVS RSLAACEGAL LVVDASQGVE AQTLANVYLA
201: LENNLEIIPV LNKIDLPGAE PEKVLREIEE VIGLDCSKAI FCSAKEGIGI TEILDAIVQR IPAPLDTAGK PLRALIFDSY YDPYRGVIVY FRVIDGKVKK
301: GDRIFFMASG KDYFADEVGV LSPNQIQVDE LYAGEVGYIA ASVRSVADAR VGDTITHYSR KAESSLPGYE EATPMVFCGL FPVDADQFPD LRDALEKLQL
401: NDAALKFEPE TSSAMGFGFR CGFLGLLHME IVQERLEREY NLNLITTAPS VVYRVNSVNG DTTLCSNPSR LPDPGQRKSV EEPYVKIELL TPKDYIGALM
501: ELAQERRGEF KEMKYIAENR ASILYELPLA EMVGDFFDQL KSRTKGYASM EYSVIGYRES DLIKLDILIN AEMVEPLSTI VHRDKAYSVG RALTQKLKEL
601: IPRQMFKVPI QACIGSKVIA SEALSAIRKD VLAKCYGGDI SRKKKLLKKQ AAGKKRMKAI GRVDVPQEAF MAVLKLEREV L

Arabidopsis Description

Translation factor GUF1 homolog, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A178USI8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.