Factsheet for HORVU6Hr1G050160.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G183500.1	Wheat	plastid	84.8	67.26
TraesCS6A01G192800.1	Wheat	plastid	84.8	67.06
TraesCS6B01G224800.2	Wheat	plastid	84.62	66.81
KXG30054	Sorghum	mitochondrion, plastid	79.36	63.04
Zm00001d015929_P002	Maize	plastid	78.61	62.44
Os02t0285800-01	Rice	plasma membrane	76.36	60.84
GSMUA_Achr5P14760_001	Banana	plastid	68.67	53.74
AT5G13650.2	Thale cress	plastid	66.42	52.37
Solyc03g058190.2.1	Tomato	plastid	65.67	52.08
CDY09816	Canola	plastid	65.85	52.0
Bra008811.1-P	Field mustard	plastid	65.67	51.93
CDY65992	Canola	plastid	65.48	51.78
CDX91105	Canola	plastid	65.29	51.63
VIT_08s0007g08290.t01	Wine grape	plastid	64.92	51.26
KRH71976	Soybean	nucleus	64.92	51.18
KRH33159	Soybean	nucleus	65.1	51.03
CDX85635	Canola	plastid	65.29	49.15
HORVU3Hr1G072230.1	Barley	plastid	34.33	26.33
HORVU6Hr1G025110.1	Barley	plastid	21.76	21.72
HORVU7Hr1G019550.9	Barley	mitochondrion	21.01	16.77
HORVU7Hr1G082910.2	Barley	mitochondrion	21.2	14.91
HORVU2Hr1G092180.1	Barley	plastid	19.7	13.76
HORVU7Hr1G106150.1	Barley	cytosol	20.45	12.93
HORVU5Hr1G116580.1	Barley	cytosol, plasma membrane	20.45	12.93
HORVU3Hr1G057880.1	Barley	cytosol	20.07	12.69
HORVU3Hr1G057890.1	Barley	cytosol	20.07	12.69
HORVU7Hr1G090710.6	Barley	plastid	18.76	10.1
HORVU1Hr1G003960.9	Barley	cytosol	17.26	9.98
HORVU5Hr1G092260.1	Barley	nucleus, plastid	19.51	8.92
HORVU5Hr1G116710.1	Barley	cytosol	8.63	7.84
HORVU1Hr1G009320.1	Barley	nucleus	8.63	5.15
HORVU6Hr1G025120.1	Barley	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.30.70.870	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A287U526	InterPro:EFG_III/V
InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0000302	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536
GO:GO:0009570	GO:GO:0009987	GO:GO:0010468	GO:GO:0016787	GO:GO:0031425	InterPro:G_TR_CS
EnsemblPlantsGene:HORVU6Hr1G050160	EnsemblPlants:HORVU6Hr1G050160.1	InterPro:IPR000795	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF03144
PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR42908	PANTHER:PTHR42908:SF4	SUPFAM:SSF50447
SUPFAM:SSF52540	SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	InterPro:Transl_B-barrel_sf
UniParc:UPI000B46CBF4	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:304264125..304376093

Molecular Weight (calculated)

58562.6 Da

IEP (calculated)

8.164

GRAVY (calculated)

-0.259

Length

533 amino acids

Sequence
(BLAST)

001: ADDVACLAAH TASHQSHGRY PPRLRRLPPA LQNPRNSPKP PAAAASIRLV MQMQTITLRA GPSARHLAPP PASASSSNLS AGRCFLPRPP HSRCRRPRSL
101: RASASLEQEV KERADSPSPS AGTSSQATRR DVRNIAIVAH VDHGKTTLVD SMLRQSKVFR DNQVVQERIM DSNDLERERG ITILSKNTSI TYKGTKINII
201: DTPGHSDFGG EVERVLNMVE GILLVVDSVE GPMPQTRFVL KKALEFGHAV VVVVNKVDRP IARPEFVVNS TFELFIELNA TDEQCDFQTV YAIGLKGKAG
301: ISADNLADDL GPLFEAILRC IPEPRIEKDG ALQMLVTSTE YDEHKGRIAI GRLHAGELKR GMEVKVCTPD DACRIGKIGE LFVYENFGRV PVESVSAGDI
401: CAVCGINDIM IGETIADKVS GTALPTIKIE EPTVRMSFSI NTSPFVGKEG KFVTSRNLRD RLYRELERNL AMKVEDGETA DTFLVSGRGT LHLTILIENM
501: RREGYEFMIG PPKVINKTVN GKLLEPYEVF PSL

Best Arabidopsis Sequence Match ( AT5G13650.2 )
(BLAST)

001: MELSLSTSSA SPAVLRRQAS PLLHKQQVLG VSFASALKPG GGALRFPSRR PLPRPITCSA SPSTAEPASV EVKKKQLDRR DNVRNIAIVA HVDHGKTTLV
101: DSMLRQAKVF RDNQVMQERI MDSNDLERER GITILSKNTS ITYKNTKVNI IDTPGHSDFG GEVERVLNMV DGVLLVVDSV EGPMPQTRFV LKKALEFGHA
201: VVVVVNKIDR PSARPEFVVN STFELFIELN ATDEQCDFQA IYASGIKGKA GLSPDDLAED LGPLFEAIIR CVPGPNIEKD GALQMLATNI EYDEHKGRIA
301: IGRLHAGVLR KGMDVRVCTS EDSCRFARVS ELFVYEKFYR VPTDSVEAGD ICAVCGIDNI QIGETIADKV HGKPLPTIKV EEPTVKMSFS VNTSPFSGRE
401: GKYVTSRNLR DRLNRELERN LAMKVEDGET ADTFIVSGRG TLHITILIEN MRREGYEFMV GPPKVINKRV NDKLLEPYEI ATVEVPEAHM GPVVELLGKR
501: RGQMFDMQGV GSEGTTFLRY KIPTRGLLGL RNAILTASRG TAILNTVFDS YGPWAGDIST RDLGSLVAFE DGTSTSYALA SAQERGQMFV GSGVDVYKGQ
601: IVGIHQRPGD LGLNICKKKA ATNIRSNKDV TVILDTPLTY SLDDCIEYIE EDELVEVTPS SIRMCKNQKM AKKGRQ

Arabidopsis Description

Elongation factor family protein [Source:UniProtKB/TrEMBL;Acc:F4K409]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.