CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX91105	Canola	plastid	93.64	98.37
Bra008811.1-P	Field mustard	plastid	92.66	97.33
CDY09816	Canola	plastid	92.66	97.19
CDY65992	Canola	plastid	92.51	97.18
AT5G13650.2	Thale cress	plastid	91.24	95.56
Solyc03g058190.2.1	Tomato	plastid	78.53	82.74
KRH71976	Soybean	nucleus	76.84	80.47
VIT_08s0007g08290.t01	Wine grape	plastid	76.55	80.3
KRH33159	Soybean	nucleus	76.13	79.26
GSMUA_Achr5P14760_001	Banana	plastid	72.74	75.62
KXG30054	Sorghum	mitochondrion, plastid	71.47	75.41
Os02t0285800-01	Rice	plasma membrane	71.19	75.34
Zm00001d015929_P002	Maize	plastid	71.33	75.26
TraesCS6A01G192800.1	Wheat	plastid	69.63	73.15
TraesCS6D01G183500.1	Wheat	plastid	69.35	73.07
TraesCS6B01G224800.2	Wheat	plastid	69.49	72.89
HORVU6Hr1G050160.1	Barley	plastid	49.15	65.29
CDX84803	Canola	mitochondrion	35.03	39.74
CDY19061	Canola	mitochondrion	36.72	38.86
CDY54484	Canola	mitochondrion	36.3	38.42
CDY23967	Canola	cytosol	6.21	37.93
CDY44781	Canola	plastid	22.32	23.41
CDY40739	Canola	plastid	22.18	22.95
CDY65319	Canola	endoplasmic reticulum, plastid, vacuole	21.61	22.24
CDX67441	Canola	plastid	21.47	22.16
CDY49975	Canola	cytosol	11.02	19.55
CDX74705	Canola	plastid	19.07	17.88
CDY18957	Canola	plastid	19.07	17.86
CDX78349	Canola	cytosol	5.79	17.75
CDY10337	Canola	cytosol	11.86	17.72
CDY69302	Canola	cytosol	7.49	16.61
CDY46917	Canola	plastid	16.67	15.23
CDY31838	Canola	plastid	16.67	15.23
CDX90241	Canola	cytosol, extracellular	16.53	14.79
CDY40423	Canola	cytosol	16.1	14.49
CDY24982	Canola	endoplasmic reticulum, vacuole	16.95	14.32
CDY32224	Canola	cytosol	10.03	13.79
CDY10688	Canola	cytosol	15.96	12.96
CDY15566	Canola	cytosol	13.98	11.88
CDY09982	Canola	nucleus	16.38	11.73
CDY70516	Canola	cytosol	8.05	11.2
CDY70689	Canola	cytosol	7.91	10.35
CDY71233	Canola	mitochondrion, nucleus	7.77	9.86
CDY05533	Canola	cytosol	8.76	9.49
CDY32072	Canola	cytosol	8.62	9.43
CDY70526	Canola	nucleus	0.85	7.06
CDY49974	Canola	nucleus	0.85	7.06
CDY54261	Canola	nucleus	2.12	6.52
CDY32225	Canola	nucleus	3.11	6.21

Protein Annotations

Gene3D:2.40.30.10	Gene3D:2.40.50.250	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300	MapMan:35.1
GO:A0A078D8W7	InterPro:BipA_V	EnsemblPlants:CDX85635	ProteinID:CDX85635	ProteinID:CDX85635.1	InterPro:EFG_III/V
InterPro:EFG_V-like	InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00143365001	InterPro:G_TR_CS	InterPro:IPR000795
InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF00679	PFAM:PF03144	PRINTS:PR00315	ScanProsite:PS00301
PFscan:PS51722	PANTHER:PTHR42908	PANTHER:PTHR42908:SF4	SMART:SM00838	SUPFAM:SSF50447	SUPFAM:SSF52540
SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR01394	InterPro:Transl_B-barrel_sf
InterPro:TypA_GTP-bd	UniParc:UPI0004EE03AA	SEG:seg	:	:	:

Description

BnaA02g01780D

Coordinates

chrLK031842:-:954732..958291

Molecular Weight (calculated)

78242.0 Da

IEP (calculated)

7.032

GRAVY (calculated)

-0.260

Length

708 amino acids

Sequence
(BLAST)

001: MELSLSTSSA SPAVLRSQAS PLLHKQQVLG LTFASALKPG GALRFTPPRR PLHRPITCSV SPSTAEPSSE VKKKKTLVRR DDVRNIAIVA HVDHGKTTLV
101: DSMLRQAKVF RDNQVMQERI MDSNDLERER GITILSKNTS ITYKNTKVNI IDTPGHSDFG GEVERVLNMV DGVLLVVDSV EGPMPQTRFV LKKALEFGHA
201: VVVVVNKIDR PSARPEFVVN STFELFIELN ATDEQCDFQA IYASGIKGKA GLAPDDLSED LGPLFEAIIR CVPGPNIEKD GALQMLATNI EYDEHKGRIA
301: IGRLHAGALR KGMDVRVCTS EDSCRFARVS ELFVYEKFYR VPADTVEAGD ICAVCGIDDI QIGETIADKV HGKPLPTIKV EEPTVKMSFS VNTSPFSGRE
401: GKYVTSRNLR DRLNRELERN LAMKVEDGET ADTFIISGRG TLHITILIEN MRREGYEFMV GPPKVINKRV NDKLLEPFEV ATVEVPENHM GPVVELLGRR
501: RGQMFDMQGV GSEGTLFLRY KIPTRGLLGL RNAILTASRG TAILNTVFDS YGPWAGDIST RDLGSLVAFE DGTSTSYALA SSQERGQMFV GAGVDVYKGQ
601: IVGIHQRPGD LGLNICKKKA ATNIRSNKDV TVVLDTPLTY SLDDCIEYIE EDELVEVTPL SIRMCKNPKM AKKGRCYHKV LPTSLWNTLT NNASDSFHLH
701: HHHHDEST

Best Arabidopsis Sequence Match ( AT5G13650.1 )
(BLAST)

001: MELSLSTSSA SPAVLRRQAS PLLHKQQVLG VSFASALKPG GGALRFPSRR PLPRPITCSA SPSTAEPASE VKKKQLDRRD NVRNIAIVAH VDHGKTTLVD
101: SMLRQAKVFR DNQVMQERIM DSNDLERERG ITILSKNTSI TYKNTKVNII DTPGHSDFGG EVERVLNMVD GVLLVVDSVE GPMPQTRFVL KKALEFGHAV
201: VVVVNKIDRP SARPEFVVNS TFELFIELNA TDEQCDFQAI YASGIKGKAG LSPDDLAEDL GPLFEAIIRC VPGPNIEKDG ALQMLATNIE YDEHKGRIAI
301: GRLHAGVLRK GMDVRVCTSE DSCRFARVSE LFVYEKFYRV PTDSVEAGDI CAVCGIDNIQ IGETIADKVH GKPLPTIKVE EPTVKMSFSV NTSPFSGREG
401: KYVTSRNLRD RLNRELERNL AMKVEDGETA DTFIVSGRGT LHITILIENM RREGYEFMVG PPKVINKRVN DKLLEPYEIA TVEVPEAHMG PVVELLGKRR
501: GQMFDMQGVG SEGTTFLRYK IPTRGLLGLR NAILTASRGT AILNTVFDSY GPWAGDISTR DLGSLVAFED GTSTSYALAS AQERGQMFVG SGVDVYKGQI
601: VGIHQRPGDL GLNICKKKAA TNIRSNKDVT VILDTPLTYS LDDCIEYIEE DELVEVTPSS IRMCKNQKMA KKGRQ

Arabidopsis Description

Elongation factor family protein [Source:UniProtKB/TrEMBL;Acc:F4K409]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.