CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027021.1-P	Field mustard	plastid	99.87	99.87
CDY31838	Canola	plastid	99.23	99.23
AT1G62750.1	Thale cress	plastid	96.52	95.53
VIT_00s1286g00020.t01	Wine grape	cytosol, mitochondrion	25.03	91.94
Os04t0538166-00	Rice	cytosol, mitochondrion, peroxisome	16.26	89.36
Os04t0538100-01	Rice	plasma membrane	43.61	87.56
Solyc08g079180.2.1	Tomato	plastid	85.68	84.37
PGSC0003DMT400012076	Potato	cytosol, plastid	85.68	84.37
VIT_00s0323g00080.t01	Wine grape	plastid	84.26	84.26
KRH57341	Soybean	nucleus, plastid	84.52	83.97
GSMUA_Achr5P13570_001	Banana	mitochondrion	77.94	83.43
KRH04069	Soybean	nucleus, plastid	84.52	83.23
Zm00001d025948_P001	Maize	plastid	80.52	81.25
Zm00001d002822_P001	Maize	plastid	80.26	80.88
TraesCS2A01G387000.1	Wheat	mitochondrion, plastid	79.74	80.47
TraesCS2D01G383800.1	Wheat	mitochondrion, plastid	79.74	80.47
TraesCS2B01G404600.1	Wheat	plastid	79.61	80.34
EES12566	Sorghum	plastid	80.26	80.26
HORVU2Hr1G092180.1	Barley	plastid	78.84	80.08
CDY18957	Canola	plastid	42.19	43.25
CDX74705	Canola	plastid	41.94	43.05
CDY49975	Canola	cytosol	11.74	22.81
CDY10337	Canola	cytosol	13.55	22.15
CDX90241	Canola	cytosol, extracellular	22.06	21.62
CDY24982	Canola	endoplasmic reticulum, vacuole	22.71	21.0
CDY40423	Canola	cytosol	21.29	20.97
CDY70516	Canola	cytosol	13.42	20.43
CDX84803	Canola	mitochondrion	15.87	19.71
CDY70689	Canola	cytosol	13.68	19.59
CDY32224	Canola	cytosol	12.9	19.42
CDY19061	Canola	mitochondrion	16.65	19.28
CDY15566	Canola	cytosol	20.65	19.21
CDY71233	Canola	mitochondrion, nucleus	13.81	19.18
CDY54484	Canola	mitochondrion	16.39	18.98
CDY32072	Canola	cytosol	15.61	18.7
CDY05533	Canola	cytosol	15.74	18.68
CDY44781	Canola	plastid	16.13	18.52
CDY40739	Canola	plastid	16.26	18.42
CDY09982	Canola	nucleus	22.58	17.69
CDY10688	Canola	cytosol	19.87	17.66
CDY65992	Canola	plastid	15.1	17.36
CDY09816	Canola	plastid	15.1	17.33
CDY69302	Canola	cytosol	7.1	17.24
CDX91105	Canola	plastid	14.84	17.06
CDX67441	Canola	plastid	14.97	16.91
CDY65319	Canola	endoplasmic reticulum, plastid, vacuole	14.84	16.72
CDX85635	Canola	plastid	15.23	16.67
CDY49974	Canola	nucleus	1.81	16.47
CDY70526	Canola	nucleus	1.81	16.47
CDY54261	Canola	nucleus	4.26	14.35
CDY32225	Canola	nucleus	4.9	10.73
CDX78349	Canola	cytosol	3.1	10.39
CDY23967	Canola	cytosol	1.03	6.9

Protein Annotations

MapMan:17.7.4.3	Gene3D:2.40.30.10	Gene3D:3.30.230.10	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300
GO:A0A078I9U2	UniProt:A0A078I9U2	EnsemblPlants:CDY46917	ProteinID:CDY46917	ProteinID:CDY46917.1	InterPro:EFG_III
InterPro:EFG_III/V	InterPro:EFG_V	InterPro:EFG_V-like	InterPro:EFTu-like_2	InterPro:EF_G_plantC	GO:GO:0000166
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003746	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006412	GO:GO:0006414	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00086390001
InterPro:G_TR_CS	InterPro:IPR000795	InterPro:IPR014721	HAMAP:MF_00054_B	HAMAP:MF_03063	InterPro:P-loop_NTPase
PFAM:PF00009	PFAM:PF00679	PFAM:PF03144	PFAM:PF03764	PFAM:PF14492	PRINTS:PR00315
ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR43261	PANTHER:PTHR43261:SF1	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr
SMART:SM00838	SMART:SM00889	SUPFAM:SSF50447	SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF54980
InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR00484	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EFG/EF2
InterPro:Transl_elong_EFG/EF2_IV	UniPathway:UPA00345	UniParc:UPI0004EEA899	:	:	:

Description

BnaA09g12770DElongation factor G, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A078I9U2]

Coordinates

chrLK032690:-:97198..100075

Molecular Weight (calculated)

85292.7 Da

IEP (calculated)

5.721

GRAVY (calculated)

-0.218

Length

775 amino acids

Sequence
(BLAST)

001: MAADALRISS SSSLVCNLNG SQRRPVLTPL SHHRSTFLGL PPRASLSHLL GKARIGLGSS KLVHRKKQFS VFAAAEGEGK RAVPLKDYRN IGIMAHIDAG
101: KTTTTERILY YTGRNYKIGE VHEGTATMDW MEQEQERGIT ITSAATTTFW DKHRINIIDT PGHVDFTLEV ERALRVLDGA ICLFDSVAGV EPQSETVWRQ
201: ADKYGVPRIC FVNKMDRLGA NFFRTRDMIV TNLGAKPLVL QIPIGAEDSF KGVVDLVRMK AIVWSGEELG AKFNYEDIPA DLEELAQEYR AAMMELIVDL
301: DDEVMENYLE GVEPDEATVK RLVRKGTITG KFVPILCGSA FKNKGVQPLL DAVVDYLPSP VEVPPMNGTD PENPEVTIVR KPDDEEPFAG LAFKIMSDPF
401: VGSLTFVRVY SGKLTAGSYV LNANKGKKER IGRLLEMHAN SREDVKVALT GDIVALAGLK DTITGETLSD PESPVVLERM DFPDPVIKVA IEPKTKADID
501: KMATGLIKLA QEDPSFHFSR DEEMNQTVIE GMGELHLEII VDRLKREFKV EANVGAPQVN YRESISKVAE VKYTHKKQSG GQGQFADITV RFEPLEAGSG
601: YEFKSEIKGG AVPREYIPGV MKGLEECMGS GVLAGFPVVD VRACLVDGSY HDVDSSVLAF QLAARGAFRE GMRKAGPRML EPIMRVEVVT PEEHLGDVIG
701: DLNSRRGQIN SFGDKPGGLK VVDSLVPLAE MFQYVSTLRG MTKGRASYTM QLAKFDVVPQ HIQNQLSSKD QEVAA

Best Arabidopsis Sequence Match ( AT1G62750.1 )
(BLAST)

001: MAADALRISS SSSGSLVCNL NGSQRRPVLL PLSHRATFLG LPPRASSSSI SSSIPQFLGT SRIGLGSSKL SQKKKQFSVF AAAEAEAKRA VPLKDYRNIG
101: IMAHIDAGKT TTTERILYYT GRNYKIGEVH EGTATMDWME QEQERGITIT SAATTTFWDK HRINIIDTPG HVDFTLEVER ALRVLDGAIC LFDSVAGVEP
201: QSETVWRQAD KYGVPRICFV NKMDRLGANF FRTRDMIVTN LGAKPLVLQI PIGAEDVFKG VVDLVRMKAI VWSGEELGAK FSYEDIPEDL EDLAQEYRAA
301: MMELIVDLDD EVMENYLEGV EPDEATVKRL VRKGTITGKF VPILCGSAFK NKGVQPLLDA VVDYLPSPVE VPPMNGTDPE NPEITIIRKP DDDEPFAGLA
401: FKIMSDPFVG SLTFVRVYSG KISAGSYVLN ANKGKKERIG RLLEMHANSR EDVKVALTGD IIALAGLKDT ITGETLSDPE NPVVLERMDF PDPVIKVAIE
501: PKTKADIDKM ATGLIKLAQE DPSFHFSRDE EMNQTVIEGM GELHLEIIVD RLKREFKVEA NVGAPQVNYR ESISKIAEVK YTHKKQSGGQ GQFADITVRF
601: EPLEAGSGYE FKSEIKGGAV PREYIPGVMK GLEECMSTGV LAGFPVVDVR ACLVDGSYHD VDSSVLAFQL AARGAFREGM RKAGPRMLEP IMRVEVVTPE
701: EHLGDVIGDL NSRRGQINSF GDKPGGLKVV DSLVPLAEMF QYVSTLRGMT KGRASYTMQL AKFDVVPQHI QNQLSSKDQE VAA

Arabidopsis Description

CPEFGElongation factor G, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SI75]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.