Factsheet for AT1G62750.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46917	Canola	plastid	95.53	96.52
Bra027021.1-P	Field mustard	plastid	95.4	96.39
CDY31838	Canola	plastid	95.27	96.26
VIT_00s1286g00020.t01	Wine grape	cytosol, mitochondrion	24.78	91.94
Os04t0538166-00	Rice	cytosol, mitochondrion, peroxisome	16.09	89.36
Os04t0538100-01	Rice	plasma membrane	43.04	87.31
Solyc08g079180.2.1	Tomato	plastid	85.44	85.01
KRH57341	Soybean	nucleus, plastid	84.67	85.0
PGSC0003DMT400012076	Potato	cytosol, plastid	85.19	84.75
VIT_00s0323g00080.t01	Wine grape	plastid	83.65	84.52
KRH04069	Soybean	nucleus, plastid	84.67	84.24
GSMUA_Achr5P13570_001	Banana	mitochondrion	77.39	83.7
Zm00001d025948_P001	Maize	plastid	79.18	80.73
Zm00001d002822_P001	Maize	plastid	78.93	80.36
TraesCS2D01G383800.1	Wheat	mitochondrion, plastid	78.8	80.34
TraesCS2A01G387000.1	Wheat	mitochondrion, plastid	78.8	80.34
TraesCS2B01G404600.1	Wheat	plastid	78.67	80.21
HORVU2Hr1G092180.1	Barley	plastid	77.91	79.95
EES12566	Sorghum	plastid	79.05	79.87
AT1G45332.1	Thale cress	mitochondrion	41.25	42.84
AT2G45030.1	Thale cress	mitochondrion	41.12	42.71
AT3G12915.2	Thale cress	cytosol	21.71	21.57
AT1G56070.2	Thale cress	cytosol	23.12	21.47
AT2G31060.3	Thale cress	mitochondrion	16.86	19.67
AT5G08650.1	Thale cress	plastid	15.84	18.21
AT5G39900.1	Thale cress	mitochondrion	14.81	17.5
AT5G25230.1	Thale cress	cytosol	21.58	17.37
AT1G06220.2	Thale cress	cytosol	21.84	17.33
AT5G13650.2	Thale cress	plastid	14.81	17.16
AT3G22980.2	Thale cress	cytosol	21.84	16.85

Protein Annotations

MapMan:17.7.4.3	Gene3D:2.40.30.10	Gene3D:3.30.230.10	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300
EntrezGene:842573	UniProt:A0A178WCD2	ProteinID:AAF19548.1	ProteinID:AEE34000.1	ArrayExpress:AT1G62750	EnsemblPlantsGene:AT1G62750
RefSeq:AT1G62750	TAIR:AT1G62750	RefSeq:AT1G62750-TAIR-G	EnsemblPlants:AT1G62750.1	TAIR:AT1G62750.1	Symbol:ATSCO1
EMBL:AY039936	EMBL:AY142646	Unigene:At.21185	EMBL:BK005771	InterPro:EFG_III	InterPro:EFG_III/V
InterPro:EFG_V	InterPro:EFG_V-like	InterPro:EFTu-like_2	InterPro:EF_G_plantC	GO:GO:0000166	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003746	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005524	GO:GO:0005525	GO:GO:0005575	GO:GO:0005576	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006412	GO:GO:0006414	GO:GO:0007275	GO:GO:0008135
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0009658	GO:GO:0009791	GO:GO:0009845	GO:GO:0009941	GO:GO:0009987	GO:GO:0016043
GO:GO:0016787	GO:GO:0019538	GO:GO:0048046	InterPro:G_TR_CS	InterPro:IPR000795	InterPro:IPR014721
HAMAP:MF_00054_B	HAMAP:MF_03063	RefSeq:NP_564801.1	ProteinID:OAP16109.1	InterPro:P-loop_NTPase	PFAM:PF00009
PFAM:PF00679	PFAM:PF03144	PFAM:PF03764	PFAM:PF14492	PO:PO:0000005	PO:PO:0000013
PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007131	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR43261	UniProt:Q9SI75
InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	SMART:SM00838	SMART:SM00889	SUPFAM:SSF50447	SUPFAM:SSF52540
SUPFAM:SSF54211	SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR00484
InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EFG/EF2	InterPro:Transl_elong_EFG/EF2_IV	UniParc:UPI00000AC07A	SEG:seg	:

Description

CPEFGElongation factor G, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SI75]

Coordinates

chr1:-:23233434..23236447

Molecular Weight (calculated)

86062.5 Da

IEP (calculated)

5.284

GRAVY (calculated)

-0.204

Length

783 amino acids

Sequence
(BLAST)

001: MAADALRISS SSSGSLVCNL NGSQRRPVLL PLSHRATFLG LPPRASSSSI SSSIPQFLGT SRIGLGSSKL SQKKKQFSVF AAAEAEAKRA VPLKDYRNIG
101: IMAHIDAGKT TTTERILYYT GRNYKIGEVH EGTATMDWME QEQERGITIT SAATTTFWDK HRINIIDTPG HVDFTLEVER ALRVLDGAIC LFDSVAGVEP
201: QSETVWRQAD KYGVPRICFV NKMDRLGANF FRTRDMIVTN LGAKPLVLQI PIGAEDVFKG VVDLVRMKAI VWSGEELGAK FSYEDIPEDL EDLAQEYRAA
301: MMELIVDLDD EVMENYLEGV EPDEATVKRL VRKGTITGKF VPILCGSAFK NKGVQPLLDA VVDYLPSPVE VPPMNGTDPE NPEITIIRKP DDDEPFAGLA
401: FKIMSDPFVG SLTFVRVYSG KISAGSYVLN ANKGKKERIG RLLEMHANSR EDVKVALTGD IIALAGLKDT ITGETLSDPE NPVVLERMDF PDPVIKVAIE
501: PKTKADIDKM ATGLIKLAQE DPSFHFSRDE EMNQTVIEGM GELHLEIIVD RLKREFKVEA NVGAPQVNYR ESISKIAEVK YTHKKQSGGQ GQFADITVRF
601: EPLEAGSGYE FKSEIKGGAV PREYIPGVMK GLEECMSTGV LAGFPVVDVR ACLVDGSYHD VDSSVLAFQL AARGAFREGM RKAGPRMLEP IMRVEVVTPE
701: EHLGDVIGDL NSRRGQINSF GDKPGGLKVV DSLVPLAEMF QYVSTLRGMT KGRASYTMQL AKFDVVPQHI QNQLSSKDQE VAA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.