Factsheet for AT5G13650.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008811.1-P	Field mustard	plastid	95.86	96.14
CDY65992	Canola	plastid	95.71	95.99
CDY09816	Canola	plastid	95.56	95.7
CDX91105	Canola	plastid	95.27	95.55
CDX85635	Canola	plastid	95.56	91.24
Solyc03g058190.2.1	Tomato	plastid	81.8	82.29
KRH71976	Soybean	nucleus	80.77	80.77
VIT_08s0007g08290.t01	Wine grape	plastid	80.18	80.3
KRH33159	Soybean	nucleus	80.03	79.56
KXG30054	Sorghum	mitochondrion, plastid	76.04	76.6
Zm00001d015929_P002	Maize	plastid	75.89	76.45
Os02t0285800-01	Rice	plasma membrane	75.44	76.23
GSMUA_Achr5P14760_001	Banana	plastid	76.63	76.06
TraesCS6A01G192800.1	Wheat	plastid	73.96	74.18
TraesCS6D01G183500.1	Wheat	plastid	73.67	74.11
TraesCS6B01G224800.2	Wheat	plastid	73.82	73.93
HORVU6Hr1G050160.1	Barley	plastid	52.37	66.42
AT2G31060.3	Thale cress	mitochondrion	38.91	39.2
AT5G39900.1	Thale cress	mitochondrion	22.78	23.23
AT5G08650.1	Thale cress	plastid	22.78	22.61
AT2G45030.1	Thale cress	mitochondrion	19.97	17.9
AT1G45332.1	Thale cress	mitochondrion	19.82	17.77
AT3G12915.2	Thale cress	cytosol	18.2	15.61
AT1G56070.2	Thale cress	cytosol	18.49	14.83
AT1G62750.1	Thale cress	plastid	17.16	14.81
AT3G22980.2	Thale cress	cytosol	17.6	11.72
AT5G25230.1	Thale cress	cytosol	16.86	11.72
AT1G06220.2	Thale cress	cytosol	17.01	11.65

Protein Annotations

Gene3D:2.40.30.10	Gene3D:2.40.50.250	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300	MapMan:35.1
EntrezGene:831209	UniProt:A0A178UNX2	ProteinID:AED91922.1	ProteinID:AED91923.1	ArrayExpress:AT5G13650	EnsemblPlantsGene:AT5G13650
RefSeq:AT5G13650	TAIR:AT5G13650	RefSeq:AT5G13650-TAIR-G	EnsemblPlants:AT5G13650.2	TAIR:AT5G13650.2	EMBL:AY059943
Unigene:At.21627	ProteinID:BAB08691.1	EMBL:BT001186	InterPro:BipA_V	InterPro:EFG_III/V	InterPro:EFG_V-like
InterPro:EFTu-like_2	UniProt:F4K409	GO:GO:0000166	GO:GO:0000302	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003746	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006364
GO:GO:0006412	GO:GO:0006414	GO:GO:0006950	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009409	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009628
GO:GO:0009987	GO:GO:0010468	GO:GO:0016787	GO:GO:0019538	GO:GO:0031425	GO:GO:0050821
InterPro:G_TR_CS	InterPro:IPR000795	RefSeq:NP_568289.3	RefSeq:NP_851035.1	ProteinID:OAO95107.1	ProteinID:OAO95108.1
InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF00679	PFAM:PF03144	PO:PO:0000013	PO:PO:0000037
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PRINTS:PR00315	ScanProsite:PS00301
PFscan:PS51722	PANTHER:PTHR42908	PANTHER:PTHR42908:SF4	SMART:SM00838	SUPFAM:SSF50447	SUPFAM:SSF52540
SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR01394	InterPro:Transl_B-barrel_sf
InterPro:TypA_GTP-bd	UniParc:UPI0000196D0D	SEG:seg	:	:	:

Description

Elongation factor family protein [Source:UniProtKB/TrEMBL;Acc:F4K409]

Coordinates

chr5:+:4397578..4402692

Molecular Weight (calculated)

74418.6 Da

IEP (calculated)

7.273

GRAVY (calculated)

-0.250

Length

676 amino acids

Sequence
(BLAST)

001: MELSLSTSSA SPAVLRRQAS PLLHKQQVLG VSFASALKPG GGALRFPSRR PLPRPITCSA SPSTAEPASV EVKKKQLDRR DNVRNIAIVA HVDHGKTTLV
101: DSMLRQAKVF RDNQVMQERI MDSNDLERER GITILSKNTS ITYKNTKVNI IDTPGHSDFG GEVERVLNMV DGVLLVVDSV EGPMPQTRFV LKKALEFGHA
201: VVVVVNKIDR PSARPEFVVN STFELFIELN ATDEQCDFQA IYASGIKGKA GLSPDDLAED LGPLFEAIIR CVPGPNIEKD GALQMLATNI EYDEHKGRIA
301: IGRLHAGVLR KGMDVRVCTS EDSCRFARVS ELFVYEKFYR VPTDSVEAGD ICAVCGIDNI QIGETIADKV HGKPLPTIKV EEPTVKMSFS VNTSPFSGRE
401: GKYVTSRNLR DRLNRELERN LAMKVEDGET ADTFIVSGRG TLHITILIEN MRREGYEFMV GPPKVINKRV NDKLLEPYEI ATVEVPEAHM GPVVELLGKR
501: RGQMFDMQGV GSEGTTFLRY KIPTRGLLGL RNAILTASRG TAILNTVFDS YGPWAGDIST RDLGSLVAFE DGTSTSYALA SAQERGQMFV GSGVDVYKGQ
601: IVGIHQRPGD LGLNICKKKA ATNIRSNKDV TVILDTPLTY SLDDCIEYIE EDELVEVTPS SIRMCKNQKM AKKGRQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.