Factsheet for Bra008811.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65992	Canola	plastid	99.7	99.7
CDY09816	Canola	plastid	99.11	98.96
CDX91105	Canola	plastid	97.63	97.63
AT5G13650.2	Thale cress	plastid	96.14	95.86
CDX85635	Canola	plastid	97.33	92.66
Solyc03g058190.2.1	Tomato	plastid	82.34	82.59
KRH71976	Soybean	nucleus	80.86	80.62
VIT_08s0007g08290.t01	Wine grape	plastid	80.56	80.44
KRH33159	Soybean	nucleus	80.12	79.41
KXG30054	Sorghum	mitochondrion, plastid	75.96	76.3
Zm00001d015929_P002	Maize	plastid	75.67	76.01
Os02t0285800-01	Rice	plasma membrane	75.37	75.93
GSMUA_Achr5P14760_001	Banana	plastid	76.71	75.92
TraesCS6A01G192800.1	Wheat	plastid	73.89	73.89
TraesCS6D01G183500.1	Wheat	plastid	73.59	73.81
TraesCS6B01G224800.2	Wheat	plastid	73.74	73.63
HORVU6Hr1G050160.1	Barley	plastid	51.93	65.67
Bra022824.1-P	Field mustard	mitochondrion	36.94	39.46
Bra021694.1-P	Field mustard	mitochondrion	37.54	38.8
Bra028651.1-P	Field mustard	plastid	23.89	23.54
Bra028444.1-P	Field mustard	mitochondrion	22.55	23.0
Bra004884.1-P	Field mustard	plastid	20.03	17.88
Bra027021.1-P	Field mustard	plastid	17.36	15.1
Bra010782.1-P	Field mustard	cytosol	18.1	14.47
Bra017279.1-P	Field mustard	cytosol	18.1	13.9
Bra020542.1-P	Field mustard	cytosol	18.4	13.12
Bra010781.1-P	Field mustard	cytosol	9.79	11.96
Bra024798.1-P	Field mustard	cytosol	16.91	11.59
Bra030642.1-P	Field mustard	cytosol	16.91	11.55
Bra033543.1-P	Field mustard	cytosol	13.95	10.33
Bra033895.1-P	Field mustard	cytosol, nucleus, plastid	4.75	6.65

Protein Annotations

Gene3D:2.40.30.10	Gene3D:2.40.50.250	Gene3D:3.30.70.240	Gene3D:3.30.70.870	Gene3D:3.40.50.300	MapMan:35.1
InterPro:BipA_V	EnsemblPlantsGene:Bra008811	EnsemblPlants:Bra008811.1	EnsemblPlants:Bra008811.1-P	InterPro:EFG_III/V	InterPro:EFG_V-like
InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0000302	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0006364	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009409
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009628	GO:GO:0009987	GO:GO:0010468
GO:GO:0016787	GO:GO:0031425	GO:GO:0050821	InterPro:G_TR_CS	InterPro:IPR000795	UniProt:M4CX64
InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF00679	PFAM:PF03144	PRINTS:PR00315	ScanProsite:PS00301
PFscan:PS51722	PANTHER:PTHR42908	PANTHER:PTHR42908:SF4	SMART:SM00838	SUPFAM:SSF50447	SUPFAM:SSF52540
SUPFAM:SSF54980	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR01394	InterPro:Transl_B-barrel_sf
InterPro:TypA_GTP-bd	UniParc:UPI0002543785	SEG:seg	:	:	:

Description

AT5G13650 (E=0.0) | elongation factor family protein

Coordinates

chrA10:-:13939131..13942337

Molecular Weight (calculated)

74247.5 Da

IEP (calculated)

7.303

GRAVY (calculated)

-0.247

Length

674 amino acids

Sequence
(BLAST)

001: MELSLSTSPA SPAVLRRQPS PLLHNQQVLG VSFASALKPG GALRFGSRRR PLHRPITCSA SPSTAEPSSE VKKKTLVRRN DVRNIAIVAH VDHGKTTLVD
101: SMLRQAKVFR DNQVMQERIM DSNDLERERG ITILSKNTSI TYKNTKVNII DTPGHSDFGG EVERVLNMVD GVLLVVDSVE GPMPQTRFVL KKALEFGHAV
201: VVVVNKIDRP SARPEFVVNS TFELFIELNA TDEQCDFQAI YASGIKGKAG LNPDDLAEDL GPLFEAIIRC VPGPNIEKDG ALQMLATNIE YDEHKGRIAI
301: GRLHAGALRK GMDVRVCTSE DSCRFARVSE LFVYEKFYRV PADTVEAGDI CAVCGIDDIQ IGETIADKAH GKPLPTIKVE EPTVKMSFSV NTSPFSGREG
401: KYVTSRNLRD RLNRELERNL AMKVEDGETA DTFIISGRGT LHITILIENM RREGYEFMVG PPKVINKRVN DKLLEPYEVA TVEVPENHMG PVVELLGKRR
501: GQMFDMQGVG SEGTVFLRYK IPTRGLLGLR NAILTASRGT AILNTVFDSY GPWAGDISTR DLGSLVAFED GTSTSYALAS AQERGQMFVG AGVDVYKGQI
601: VGIHQRPGDL GLNICKKKAA TNIRSNKDVT VVLDTPLTYS LDDCIEYIEE DELVEVTPLS IRMCKNPKMA KKGR

Best Arabidopsis Sequence Match ( AT5G13650.1 )
(BLAST)

001: MELSLSTSSA SPAVLRRQAS PLLHKQQVLG VSFASALKPG GGALRFPSRR PLPRPITCSA SPSTAEPASE VKKKQLDRRD NVRNIAIVAH VDHGKTTLVD
101: SMLRQAKVFR DNQVMQERIM DSNDLERERG ITILSKNTSI TYKNTKVNII DTPGHSDFGG EVERVLNMVD GVLLVVDSVE GPMPQTRFVL KKALEFGHAV
201: VVVVNKIDRP SARPEFVVNS TFELFIELNA TDEQCDFQAI YASGIKGKAG LSPDDLAEDL GPLFEAIIRC VPGPNIEKDG ALQMLATNIE YDEHKGRIAI
301: GRLHAGVLRK GMDVRVCTSE DSCRFARVSE LFVYEKFYRV PTDSVEAGDI CAVCGIDNIQ IGETIADKVH GKPLPTIKVE EPTVKMSFSV NTSPFSGREG
401: KYVTSRNLRD RLNRELERNL AMKVEDGETA DTFIVSGRGT LHITILIENM RREGYEFMVG PPKVINKRVN DKLLEPYEIA TVEVPEAHMG PVVELLGKRR
501: GQMFDMQGVG SEGTTFLRYK IPTRGLLGLR NAILTASRGT AILNTVFDSY GPWAGDISTR DLGSLVAFED GTSTSYALAS AQERGQMFVG SGVDVYKGQI
601: VGIHQRPGDL GLNICKKKAA TNIRSNKDVT VILDTPLTYS LDDCIEYIEE DELVEVTPSS IRMCKNQKMA KKGRQ

Arabidopsis Description

Elongation factor family protein [Source:UniProtKB/TrEMBL;Acc:F4K409]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.